Amphiura filiformis: 140146665
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Entry
140146665 CDS
T10871
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afil03009
]
140146665
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140146665
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
Helicases
140146665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
Motif
Other DBs
NCBI-GeneID:
140146665
NCBI-ProteinID:
XP_072024635
LinkDB
All DBs
Position
2:complement(79106986..79188735)
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AA seq
771 aa
AA seq
DB search
MATHMDFFRKLGSGAKFDLRRFRSDAERFQISKPVSSSQSDNVAKTLDLFGTLPSTPAAS
TTVKPKHKKQSVNLQNGNKRKQIDDVERNKKAKKKMKKEAKYTGVEEEDETTANFTDDHQ
RTSEKTRTDDMEEEDDIDDDDDDDDDDDDDDDGDADITIDKDESDIGSNEDDEEQHNHRQ
DDVTLLSAFNDDKPSQEVKGDDDVTLQNQDQERQHTLKSFRKHHRIHVLGTDVPDPLGTF
QEMQQECKIHSDIIENTHKAGYVAPTAIQMQAIPVMIHRRELLACAPTGSGKTAAFILPV
LQHLKEPRRQGFRAVVVSPSRELAQQTYREFVRLADGRGFRIHTIDNTAKAAKKFGPQSA
GKFDILVTTPNRLVYMLQQDPPTIKLNNVEWLIVDESDKLFEGGRTGFREQLATIYQACD
SNHVRRAMFSATLSYDVEQWCKLNLDNVVMVTVGQRNAATETVKQELMFVGDEYGKLLAI
RDIFKKGFLPPVLIFVQSKVRAKELFQELIYDGYNVDVINADKTQEQRDNVIKSFRAGKI
WVLIATELMGRGIDFKGVNLVINYDFPTSAISYIHRIGRTGRAGRGGSAVTFFTEDDIVQ
LRSIANVMRNAGCPVPEYMLQLKKLSKKRKKKLEKGQMRRKTIRTLPTPELQKAKRKKLM
MKGKGHQEENSKSFNRSPKKKLKKNMNHTNEDKQQRTKNHISSGDHPDGFKTNGSTGGYE
RTKKKPKKFGKKNGDKKKGNDRTRTGDKKAGVKPASLKSKKVMKKRKGSKK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccacatggatttttttcggaaactgggatctggtgctaagtttgatttacga
cggtttagaagtgatgctgaacgatttcagatcagcaagcctgtgtcatcatctcagtcg
gacaatgttgctaaaactttggacctgttcgggactctgccgtctactccagctgctagc
acaactgtaaaaccaaaacataaaaaacaatctgtcaatttgcaaaatggcaataaaagg
aaacaaattgatgatgtggagagaaacaaaaaggcaaagaaaaaaatgaaaaaggaggca
aaatacacaggggtggaggaagaagatgaaacaactgccaactttacagatgatcaccaa
agaacatcagaaaaaactcgtacagatgatatggaggaggaggatgatattgatgacgac
gacgatgatgatgatgatgatgatgatgatgatgatggtgatgcagatattactattgat
aaagatgaaagtgacattggcagtaacgaagatgatgaagaacaacacaaccataggcaa
gatgatgtaacgttgctgtcagcattcaacgatgacaaaccaagccaagaggtcaaaggt
gatgatgatgttactcttcaaaaccaagaccaagaaaggcagcacacactgaaatctttt
cgcaagcaccacagaatccatgtcttgggcacagatgtaccagatccattgggaaccttt
caggagatgcaacaagaatgcaaaatacatagtgatatcatagagaatacccacaaagct
gggtatgttgcacctactgccatacagatgcaggcaataccagtcatgatacataggaga
gagttattagcatgtgccccaacaggatctggcaagaccgctgcattcattcttccagta
ttacaacatctaaaggagcctcgtagacaaggtttccgagcagtggtagtgtctccaagc
cgagagttagctcagcagacgtaccgagaatttgtcagattagccgatggtagaggcttt
cgtatacataccattgacaacactgcaaaagctgcaaagaaatttggaccacagtcggca
gggaaatttgatattttagtgactacacccaacagactcgtctacatgttacagcaggat
ccaccaaccattaaattaaacaatgttgaatggttaatagtggatgaatcggacaaattg
tttgagggcggcagaacaggcttccgtgagcagcttgcaaccatctaccaggcatgcgac
tccaatcatgtaaggcgagccatgttcagtgcaacattatcttacgatgtggagcagtgg
tgtaaactgaacctggataatgttgtcatggttacagtaggtcaaagaaatgcagctaca
gagacggtgaagcaggagttaatgtttgtaggagatgaatacggaaagttgctggcaata
agggatatcttcaaaaagggcttcctgccaccagtgttgatatttgtccagtccaaggtg
agagccaaggaattgtttcaagaactgatctacgatggctacaatgtagatgtaataaat
gctgataaaactcaagaacagcgagacaatgttataaagagctttcgtgctggcaaaatt
tgggttctaatcgctacagaactgatgggacgaggcatagatttcaagggtgtcaatctt
gttatcaactatgacttccctacctcagctattagctacattcatcgcattggaaggaca
ggtagagcaggtcgaggtggaagtgctgtgacctttttcactgaagatgatattgtgcaa
ttaagaagcattgccaatgtgatgaggaatgcagggtgtcctgtgcctgagtatatgctg
caactgaagaaactatccaaaaagcgcaagaagaagttggagaaaggacaaatgcgacgg
aagacaatccggaccttacccacaccagagctgcagaaagccaaaagaaaaaagctaatg
atgaaaggcaaaggtcatcaggaagagaattcgaagtcctttaaccgttctcccaagaag
aagctgaagaaaaatatgaatcacacaaatgaggataagcagcaaaggacaaagaaccat
atatcatcaggagatcatcctgatgggtttaagactaatggatcaacaggtggatatgag
aggactaaaaagaagccaaagaaatttggaaaaaagaatggcgataaaaagaaaggaaat
gacaggactagaactggtgacaaaaaagctggtgttaaaccggcatcgttgaaaagtaag
aaggtgatgaagaagagaaaggggagtaagaaatga
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