Amphiura filiformis: 140147312
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Entry
140147312 CDS
T10871
Name
(RefSeq) uncharacterized protein
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140147312
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140147312
Spliceosome [BR:
afil03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
140147312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
140147312
NCBI-ProteinID:
XP_072025191
LinkDB
All DBs
Position
3:50999158..51012316
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AA seq
952 aa
AA seq
DB search
MSRVAHSIADGQNRSRDVFNDENVNVDFASLLLSPAVQAGLESAGFEKPSPIQLKAIPLG
RCGLDLIVQAKSGTGKTCVFSVIALESLDVQSNSTQVLVLAPTREIAVQIQEVIHSIGSA
MTELRCHVFIGGTMIGPDRQKLKKCHIAVGTPGRIKQLIEFELLKTESLRLFVLDEADKL
LDHKFKEQVNWIYHKLTENKQMLALSATYPEYLAQQLTQYMRDPVFVRLNRKDLALHGIK
QYYKVVAGHRLPNKAFEVKVEHLLHILSHVAFTQCLVFSNLQTRAQNLSDMLNFKGWPST
YISGSQEQAHRLSAMAMLKKFQCRILISTDLTARGIDAENVNLIINLDVPFDIKTYFHRI
GRAGRFGTQGAAITLASAGQEEVQLTNIKKQCHGKMVPLPDTLPSDLVTQNQTPKDLGYS
ASSDSDEDNLDESNQLESYHNLNQADKCTTSARSQESHSQNRNTNGMGLNVIHQARKTSK
LTAKKPGIDVGCQATPNHLMGIIGIDALDFKIPSLSMYRVQRSDHWTYEKAKRDFEIFLD
PSKASSLVNLPQEKTDGEQSSVHEECNQEPENIPVQKPEESEPNDQQVLSKDLEETSDES
KEIDERCVHEVQTSSLELNGHVHCKISDQKQASTMNTPCNNASSEESAHHTQQGLIHTVD
QEGPKISPTSVPQVNSQLPNAAVAAPLPDSNEQNHGISDADVATSASTSASLKNDHCKGK
DTNGKQIHQKIGIRRLHMKTLSVGQMLQQLQAKLPEDKLQAGDNLSGGRDPVWEMYRQYL
PNSSKNTDVVDSNRNKTSNSENSSAGSSDSSSDTQDNSGTGSESESSSEDGDSESESESE
LDSKSQSESESDEETESVEDEAAGQCNGDLQYSERDYDNQISEGINDMTFNQYGNTYDQN
SYDHWDSNPMTMWQNYADSYSQYYHAPYHGYYQSPYQQGYNFGEHGNWYNMY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgagttgcacacagcattgcagacggacaaaaccgcagcagagatgtttttaat
gatgaaaatgttaatgtagatttcgcatctctgcttttgtcaccagccgtacaggcaggt
ttggaaagtgcagggtttgaaaagccttctccaatacagttgaaagctattcctctaggg
agatgtggattagatctgatagttcaagccaaatctgggacaggcaagacatgtgttttc
agtgtaattgcactagaaagcttggacgtacaaagcaacagcacacaagtactggttttg
gcacccactcgagaaattgcggtacagattcaggaagttatacactccattgggtcagct
atgactgagctacgttgtcatgtgtttattggtggcacaatgattggaccagatcgacaa
aaactcaagaaatgccacattgctgtgggcactccaggtcgtatcaagcagctgatagaa
tttgagctgttgaaaacagagagtcttaggctttttgttctggatgaagctgacaagctg
ttggaccacaaatttaaggaacaagtcaattggatttaccataaattgacagaaaacaag
cagatgttggctctgtcagcaacttacccagaataccttgcacagcaactgacacagtat
atgagagacccagtgtttgtacgactcaatcgtaaagacttggcattacatggtatcaag
cagtactacaaggttgtagctggtcacagattacccaataaagcatttgaagtgaaagtg
gaacatctcttacacatcctgtctcatgtagcatttactcagtgccttgtattctccaac
ctacaaaccagagcacagaatttgtcagacatgttgaatttcaaaggttggcctagtact
tatatatccggcagtcaggagcaggcacatcgactctcagcaatggcaatgctcaagaaa
ttccagtgtagaattctcatctccactgatcttactgcccgtggtattgatgctgagaat
gtcaacttgatcatcaacctagacgtgccctttgacataaagacttatttccatcgcatc
ggtcgtgctggtagatttgggacccaaggagcagctattactctggctagtgcaggccag
gaagaagtgcagttaacaaatattaagaaacaatgtcatggcaagatggtgccactacca
gataccctcccatctgatttggtgacacaaaaccaaacgccaaaagatcttggctacagt
gcatcaagtgactcggatgaagacaaccttgatgagtcaaatcaactagaatcctatcat
aatctcaaccaggctgacaaatgcacaacatcagctcgcagtcaggaaagtcattctcaa
aacagaaatacaaatggaatgggattgaatgttatccaccaggcaagaaaaacatcaaag
ttaacagcaaaaaagcctggaattgatgtcggttgccaagcaacaccaaaccatctcatg
ggtatcattggaattgatgcacttgatttcaaaataccttcattgtcaatgtaccgggtg
caaagatccgatcactggacctatgagaaggcaaagagggactttgagatattcctggat
ccttctaaagcatcgtcacttgtcaatttgccacaggagaagactgacggagagcagtca
tcagtgcatgaggaatgtaatcaggaaccagaaaatatacctgttcaaaaaccagaagaa
agtgagccaaatgatcaacaggtactgtccaaggacttggaagaaacttcagatgaatca
aaagaaattgatgaaagatgtgtacatgaagtccaaacatcaagccttgaactaaatgga
catgtacattgtaaaatctctgaccaaaaacaggcttcaacgatgaatactccatgcaac
aatgcttccagcgaggaatccgcacatcatactcaacaaggtcttattcacactgttgat
caagaaggtcctaaaatatctccaacatctgtgcctcaagtaaactcacaattaccaaat
gctgccgttgctgccccacttccggactcaaatgagcaaaatcatggcatatctgatgca
gatgttgccacttctgcttcaacatctgcttctctcaaaaatgatcattgcaaaggtaag
gatacaaatggtaagcaaatccatcagaaaatagggattagaaggttacatatgaaaact
ctcagcgtaggacaaatgctgcaacagcttcaagctaaactccctgaagacaaacttcag
gcaggtgataatttgagtggaggtagagaccctgtgtgggaaatgtatagacagtacttg
ccaaattcatccaaaaatacagatgttgttgattcaaatagaaataagacatcaaattct
gagaatagtagcgctggaagtagtgattcaagcagtgatacacaagataatagtggtact
ggctcagaatcagaaagcagttctgaagatggtgattctgaatcagagtctgaatccgaa
ttggattccaaatctcagtcagagtcggagtctgatgaagaaactgaatcagttgaagat
gaagctgctggtcaatgtaatggtgatttacaatacagtgaaagagactatgataatcaa
attagtgaaggaataaatgatatgacattcaatcaatatggcaacacatatgatcaaaac
tcgtatgatcattgggatagcaacccaatgacaatgtggcagaactatgcagatagttac
tctcagtattaccatgcaccatatcatggatattaccagtcgccttatcaacaggggtat
aacttcggcgagcatggcaactggtataatatgtactaa
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