Amphiura filiformis: 140147929
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Entry
140147929 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
afil Amphiura filiformis
Pathway
afil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140147929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140147929
Enzymes [BR:
afil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140147929
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
140147929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
140147929
NCBI-ProteinID:
XP_072025828
LinkDB
All DBs
Position
1:46695358..46736801
Genome browser
AA seq
1737 aa
AA seq
DB search
MYWKHVPNKKLEALGFCTYTSEQLQNLSVKELTNPKPFDELGHPTSGGLYDPILGPSSKD
EVCRTCHLGYLHCPGHMGHIRMPLPVFNPLFFRLVVQLLRGSCLNCHHLLAPRWTIKLIL
SQVECLDNGLMATAIDLMDYARQSLGESKENNASLFAEQTEEKLREIVADALREKNTRNI
DSSHTHVKHVVECRRQLIQDFIRKHFVSRGRKCQLCHTLLRDLRPEHNIRILTKIPGKKG
APMQMVYVSPEDAKQHLRKLMKNEDQILRCLFGVLNLEQPPPSTSDEDADGASRHPTDVF
FLDSLPVIPSKFRPISAVGMTKYENPQTANLSKVLQDCLVLQQLLIVLGKSSREREEGRD
GEKQSHGEEGGEDRQQQAGVDKSILASVPGKTEADKLQNTWSMLQTHINCVMDSDLDKLT
QDKYPGIKQLLERKDGLFRKHMMGKRVNYAARSVISPDPYVNTDEIGIPNVIATRLTYPQ
PVTEWNVKELREAVMNGPDIHPGALSVENEDGTVVKLKSWEPSQREAVAKQLLAPKNLQM
AAFGQKKVHRHLKTGDMVLLNRQPTLHKPSIMAHKVRILPGEKTLRLHYSACKTYNADFD
GDEMNVHFPQNEIGRAEAMIIANTSEQYLVPKDGTPLGGLIQDHMVAGVRMTVRGRLFNR
SEYQQLVFCALNDKQGPVKLLPPCILKPVTKWSGKQVFSTVLLNVIPETSAPLNFKGKSK
INNKSWTKGIPEGSYAGGTPLRNIDMSEAEVIVHKGELLCGVLDKANYGNTPYGLVHCCY
ELYGGQIAVQLLSCLGRLFTTFLQQIAGFTLGVEDIIVTQNADSKRRKLMRRASKSGSDV
VAGALGVEDQTDLDAMKERYEEAHRKSEDNEMQDIDVQMKAKTDFYTNKISNVCLGEGLH
KQFPENNLQLMVISGAKGSMVNCMQISCLLGQIELEGRRPSLMISGRSLPSFLPYDVSPR
AGGYVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVNYDLT
VRDSDKSIVQFMYGEDALDILKTPFLNKNQFPFLVQNKEVLMQHHVLHNTGSGVDTKAAD
KMNKKVTRWRRKHIGLPKIHRDSAFLHFSRDRLPTLAEIYRDTEDDVNSVYLRAKEELVK
EWREREDTQEYMKNKERCPDPAHCQLRPDQHYGAISEKLGSIIKEYLGDNETTLEGTSEG
GEAVAEQFQSLLFAKYRRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLG
IPRLREILMVASQNIKTPSMSVPFLNTALAHKKSTRLKKQLTKVTLHQVLEDMHVYETYQ
ISSQFEQFRVYRIRLNFXPHKEYKDELYTNPAAVVAYVEATFIKKLLELIKKRQKDLLKM
RLVDSKKSAAMARQVQSGSDDVPENATPSGGSENDNEAQPAANKNQPPEDLDEDSMSGDD
EGADADASTTKYRQKHQEEQEYEEEEGQEGDAGGNSSEEDENTNQEADMEEDDLDRSVEN
DGSPAKSMKKARRVQESEKGERVQAVVNFSSAITGYDFDTDQQLWCEFTLKFDISNARLD
MASLIEGAVQNAVVRQAPGISRCFIADSEEGKELRTEGVNVQELYKFDHLLDLPKVYTND
IHAMARTYGIEAANRVIIKEIKDVFKVYGIHVDPRHLSLVADYMTFEGCYKPFNRIGLES
NSSPLQKMSFESTMHFLKDATLQGTYDKLRSPSARLVVGRVVYGGTGCFDLVQPAVY
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtactggaaacatgtgccaaacaagaagttggaagctttaggcttctgcacctacacc
agtgagcaattacagaatctcagtgtcaaggaactcaccaatcctaaaccatttgatgag
cttggacatcctacatcaggagggctttatgatccaatccttggaccaagtagcaaggat
gaagtatgcagaacctgtcatcttggttacctacactgccctggacacatgggtcatatc
aggatgccattgccagtattcaatccattgttcttcagacttgtagttcagctcttgcgt
ggatcatgccttaattgtcatcatctcctcgccccgagatggaccataaaactcatcctc
agccaagtagaatgccttgacaacggtctcatggcaacagctatagacttgatggactat
gccaggcaatcgctgggcgagagtaaggagaacaatgctagtttgtttgcagaacagacg
gaggaaaagctgagagagatcgtagcagatgctttgcgagaaaaaaatactagaaatatt
gacagtagccatacccatgtcaagcatgttgtagaatgcagacgtcagctcatccaggac
ttcattcgcaagcattttgtcagcagagggcgcaagtgccagctatgccacaccctctta
cgtgacctgcgtccagagcacaacattcgcattctgaccaagataccagggaagaaaggc
gcccccatgcagatggtgtatgtgtcgccagaggatgccaagcagcatttgaggaaactg
atgaagaatgaagatcaaattcttagatgcctatttggagttctcaatttagagcagcct
ccaccgtcaacatcagatgaagatgctgatggtgcctctcgacatcctacagatgtgttt
tttcttgattcattgccagtcattccatccaaatttagaccaatttcagcagttggcatg
acaaagtatgagaacccacagacagccaatctgagtaaagtactacaggactgtcttgta
ttacaacaacttcttattgtactgggaaagtcttccagagagagggaggaagggagagat
ggtgaaaaacagagtcatggagaggaaggcggggaggataggcagcaacaagcaggtgtg
gataagagtatactagcttcagtgcctggcaagactgaggcagataaactacagaataca
tggagcatgttacagacccatatcaactgtgttatggacagtgatctggataagttaacc
caagacaaatatccagggatcaaacagctgcttgagcgtaaagatggcctctttcgcaaa
cacatgatgggcaagcgtgtcaactacgcagcccgttctgtgatctctcccgatccatat
gtcaacactgacgagattggtattccaaacgtgatcgcaaccagactaacatatccgcaa
ccggtgacagaatggaatgtgaaggagctgagagaagctgtcatgaacggaccagatata
catccaggtgccttgtctgtagagaatgaagatggtacagttgtcaagctaaaatcatgg
gagccatcacaaagagaggctgttgctaagcaacttttggctcctaaaaatctacagatg
gcagcttttggacagaagaaggtacatagacatcttaagacaggtgatatggtcttattg
aatcgtcagccaaccttacacaaacccagtattatggctcacaaggtgcgcatcctaccg
ggagagaagacccttcgtcttcactactccgcctgcaagacatacaatgctgactttgat
ggtgatgagatgaatgtacactttcctcagaatgagattggtagagccgaagctatgata
attgccaatacaagtgagcagtacttagtgcctaaagatggaacaccactcggtggactt
attcaagatcacatggttgctggtgtacggatgactgtcagagggcgcttgttcaacaga
tctgaatatcagcagttagtattttgtgccttaaacgacaagcaaggtcctgtgaagctg
ttaccaccatgtatccttaaaccagtgacaaagtggtctggcaagcaagtgttttctacc
gtgctactcaatgtgatacccgagacttctgcaccgctcaacttcaagggcaagtccaag
attaataacaagtcatggactaaaggtatacctgaaggatcttatgcaggaggaactccc
ctaagaaatattgatatgtcagaagctgaagtgattgttcacaagggagagttactgtgt
ggcgtgttagacaaagctaactatggaaacacaccgtatggtttggtacactgctgttat
gagttatatggtggtcagatagcagtacaacttctcagctgtttgggtcgacttttcact
acattcctgcaacaaatagctgggtttacactaggtgtggaagacatcattgtcacacaa
aatgctgattcaaaaagaagaaaactgatgcgccgggcgtccaagtctggttccgatgtt
gtagcaggtgccttgggcgtggaggatcagactgatttagatgcaatgaaagaaagatat
gaagaagctcataggaaatctgaagacaatgaaatgcaagatatagatgtacagatgaaa
gcaaagactgatttctacaccaataaaatcagcaatgtgtgtctgggagaagggttgcat
aaacaattccctgaaaataacctgcaactcatggttatctctggtgctaaaggatctatg
gtaaactgtatgcagatctcatgtctcctaggccagatagaacttgaaggcaggcgtcca
tctcttatgataagtggacgttcgttgccatcgtttctaccatacgatgtgtcaccaaga
gcaggtggttatgttgatggccggtttctgacaggcatacgcccacaggagtatttcttc
cattgcatggctggacgagaaggtcttgtggatactgcagtgaagactagtaggagtggt
tatctgcaacgctgcatcatcaagcatttagagggactggttgtcaactatgatcttacg
gttcgagacagtgacaaaagtatagtgcagttcatgtacggagaggacgcactggacatt
cttaagacgccatttctaaataagaatcagttcccatttcttgtacaaaacaaagaggtg
ttaatgcagcaccatgtactacacaacactgggagtggtgtggacacaaaagcagctgat
aaaatgaacaaaaaggtgacacgatggcgacgcaagcatataggactcccaaagatacac
agggactcagcatttctgcatttctctcgcgacagactgcctactcttgccgagatttac
agagacacagaagatgacgtgaatagtgtgtatttgagagctaaggaagagttggttaag
gaatggcgagaaagagaagatacacaagagtatatgaagaacaaagagagatgcccagac
ccagcacactgtcagctacgtcctgaccaacactatggtgcgatatcagagaagcttgga
agtatcataaaagaatatcttggggacaatgagaccacccttgaaggcacttccgagggt
ggggaagctgttgcagaacagttccaaagcttactttttgccaaatataggagatcactt
tgtgagccaggggaagcagttggtctactggcagcacagtctataggagagccgtccact
cagatgacattgaacacattccattttgctggtcgtggtgaaatgaacgtgactcttggt
atacctagattaagagagattttgatggtggctagtcagaacatcaagacacccagcatg
tccgtacctttcctaaacactgccctcgctcacaagaagtcaacacgcctcaagaagcag
ctcaccaaggtaacgctccatcaagtcctggaggatatgcatgtttacgaaacctaccag
atatcgtctcagttcgaacagttccgtgtgtatcgcattcgtctgaattttntacctcac
aaggagtacaaagatgagctttacacaaatcctgcggcggtggtggcgtatgtggaagca
acttttatcaagaaattgctggaattgattaaaaagagacagaaggatttgttgaagatg
agacttgtagattccaaaaaatcagcagccatggcaagacaagtgcagtctggctcagat
gatgtaccagaaaacgccaccccttcaggtggtagtgaaaatgacaacgaagcacagcca
gcagccaacaaaaaccagccacctgaagacctagatgaggactctatgtcaggtgatgat
gagggcgctgatgcagatgcgtcgactaccaagtacagacaaaaacaccaggaggagcag
gaatatgaggaggaagaagggcaggaaggagacgctgggggtaattcatcagaagaggat
gagaacactaatcaggaagcagatatggaggaagacgacctggatagatctgtagagaat
gatggcagcccagcaaagtccatgaagaaagcaaggagagtgcaagaatctgagaaagga
gagagggtacaggcggttgttaacttcagttcagccataactggttatgattttgataca
gatcaacaattatggtgtgaatttacactcaaatttgatatatccaacgccagattggat
atggcatctctaatagagggcgctgttcagaatgcagttgtacgccaggctccaggaatc
agtcgatgctttattgcagactcggaggaaggcaaggaacttcgtactgaaggagtaaat
gtacaggagttatacaagtttgatcatcttctagatcttcctaaagtgtatacaaatgac
atacatgcaatggcgaggacatacgggattgaagccgccaatcgggttattattaaggaa
atcaaagacgtcttcaaagtctatggcatccatgttgaccctcggcatctgtctcttgta
gcagattacatgacctttgaaggctgctataaacctttcaaccgtatcggtttggagtcg
aattcatcacccttgcagaagatgagttttgagagtaccatgcattttttgaaagatgct
actttacaaggtacatacgacaagctgagatcaccttctgcaagattagtagtgggtcgt
gtagtatatggcggaacaggatgctttgatctagtgcaaccagcagtttattga
DBGET
integrated database retrieval system
