Amphiura filiformis: 140148051
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Entry
140148051 CDS
T10871
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afil01009
]
140148051
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140148051
04131 Membrane trafficking [BR:
afil04131
]
140148051
03036 Chromosome and associated proteins [BR:
afil03036
]
140148051
Enzymes [BR:
afil01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140148051
Protein phosphatases and associated proteins [BR:
afil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140148051
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140148051
Membrane trafficking [BR:
afil04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140148051
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140148051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
140148051
NCBI-ProteinID:
XP_072025992
LinkDB
All DBs
Position
3:complement(12740807..12804774)
Genome browser
AA seq
662 aa
AA seq
DB search
MPTIIVVCHDRMKELNLIDRCVSIPIRSATDEEILSCHGKDYLSFMKSTGTMPLDELKQH
YGGEKRESLYYNNATYECACLALGGALELTERVVRGELRNGIAVIRPPGHHAQKCCGNGY
CYFNNAAIAAQIARTKWNVQRVMIVDWDVHHGQGVQYMFEDDPSVLYFSTHRYDRKNFWP
YLTESNWDHIGKGEGCGFNINVPWNHRDHGNAEYLAAFQQVLLPIAYEFNPELIVVSAGC
DSCFGDPKGEMSIHPGFYAHLTHMLMGLANGKVVVLLEGGYSMKGLAEGISMCTKALLGD
PCPPYEDLGKPYDCAVETILEVIAHHKPYWQCLEYQVPSKSPEQCDEVSSTTEASLESDE
QDAETNKLLEEMTPEETLLACKKLDELISQTSQLHVAPHRTCLAYDERMQKHKPPFGLVN
NSHISNELQKFIKLTNEHPERPERISHIFERHKKWGLVDRCLNVQPRMATDEEIALCHDP
QYIEETKDYANFSPRELLSFQDKYSSIYLHQSTHDCARLALGCTLQVVDTVLSGKARNGV
AIVRPPGHHAEYHTAMGFCFFNHIAIAAEHAKKNYGLQRILILDWDIHHGNGTQHMFEDK
KDVLYISLHRYDGGFFFPGGLDGMADKVGLGEGEGYNVNIAWNGRSMGMLSTLQRFSRLS
CL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaataattgttgtttgtcatgatcgaatgaaagagctcaaccttattgacaga
tgtgtttctattccaatcagatcagccactgatgaagaaatcttgtcatgccatggcaaa
gattacttgagtttcatgaagtcgactgggactatgccactagatgagcttaagcagcat
tatggtggtgaaaaacgagagtcactttattacaacaatgctacatatgagtgtgcttgt
ttggcacttggtggagctttggaactaactgaaagggtggtcagaggagagttgagaaat
ggtattgctgttattagacctccaggtcaccatgcacagaaatgttgtggaaatggttac
tgctacttcaacaatgccgcaatagcagcacagatagccagaacaaaatggaatgtacaa
agggtgatgatagttgactgggatgtgcaccatggtcaaggcgttcagtatatgtttgaa
gatgatccaagcgtgctgtacttctcaactcatcgctatgataggaaaaatttttggcca
tatctgacagaatccaactgggaccatataggaaagggcgaaggttgtggcttcaacatc
aatgtgccctggaatcatagagaccatggtaatgctgaatatcttgcagccttccagcag
gtcctactcccaatagcctacgagtttaatccagagttgattgtggtatcagccggttgt
gattcctgctttggggatcctaagggagaaatgagtatacatcctggtttctatgctcac
cttacccatatgctcatgggccttgcaaatggaaaagttgttgtccttcttgagggtggt
tacagtatgaaaggtttagcagaaggaatcagcatgtgtaccaaggcattgctgggagat
ccctgtccaccatatgaggatcttggaaaaccttatgactgtgctgtggaaactattttg
gaagtcattgctcaccacaaaccatactggcaatgtttggaatatcaagttccatctaaa
agccccgagcaatgtgatgaggtatccagtactacagaggcatcattggaatcagatgag
caagatgctgaaaccaataaacttctggaagaaatgacacctgaggaaactctgctggct
tgcaagaaattggatgagttgataagtcagactagtcaattgcatgttgcaccacacaga
acctgtctcgcttatgatgaaagaatgcaaaaacacaagcctccatttggacttgtgaac
aatagccatatcagtaatgaactacagaagttcataaagctgacaaatgagcacccagag
agaccagagaggatatcgcatatatttgaaaggcataagaaatggggattggtggacagg
tgtttgaatgtacagccaagaatggcaactgatgaagaaattgccttatgtcatgaccca
caatacattgaggaaacaaaggactatgctaatttttctcccagagagttactcagtttc
caggataaatactcatccatctacctccatcagtccacacatgattgtgccaggctggct
ctgggatgtacactccaagttgttgacactgttctttctggaaaggctcgtaatggtgta
gcaatagtcaggccaccaggtcatcatgctgagtaccatactgctatgggattctgcttc
tttaatcatatagctatagctgctgaacatgccaagaaaaactatgggcttcagagaata
ttgattcttgattgggatattcaccatggtaatggtacccagcatatgtttgaagacaag
aaggatgtgttgtatatatctttacatcggtatgatggtgggttcttctttcctggtggg
cttgatggtatggctgataaggttggtctaggagaaggagaaggctacaatgtcaacata
gcttggaatgggagaagcatggggatgctgagtacattgcagcgtttcagcagattgtca
tgcctatag
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