Amphiura filiformis: 140148055
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Entry
140148055 CDS
T10871
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140148055
Enzymes [BR:
afil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
140148055
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
140148055
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
140148055
NCBI-ProteinID:
XP_072026002
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Position
3:12878364..12903194
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AA seq
539 aa
AA seq
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MKVLTWNVNGIRAAKVPLKTLLDSLDSDVICFQETKVTRDQLDEASCIVEGYNAYFSFSK
KRSGYSGVATFCRNTAAPVAAEEGLSGLLSSHNASAIGCHGDTANFTDEELQSLDAEGRS
VMTQHQLKTSDEKLLDVVIINVYCPRADRENQERFNYKLRFYELLQLRAEALVNAGRHVI
IVGDINASHKPIDHCDPDVERIFRLHPSRQWLDKFLYNSESKAEVSQVPTNPNAESEHEV
PTPGYFVDSFRSFHPDRKNAFTCWSTVTSARQTNYGTRIDYIFADKDLFHQQFVNCDIMP
EVVGSDHCPVKAEVSGTCEASSTYPALCTKFMPEFLGKQQKLSSFFQKVSPSKHFSGLLA
TDDKNVKKRSNTVDSSTTNKNKKKQKTGPSSGNLLNFFQRKTTTSSSMTSVPQKAELETS
NINKSSQDSNAMSNVTDKSDKQNIGTDERDQRETQCSSQESSSNEKSDSKGQLSAGWKTL
FKGLPPAPLCKGHKEPCVLRTVKKAGINRGKRFYVCAKPEGHKSNPEARCDHFEWMGKK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttaacatggaatgtcaatggcatcagggcagcgaaggtcccactgaaaact
ttgctcgattcgcttgactccgatgtgatttgctttcaagaaaccaaagtaacacgggat
cagcttgatgaagcaagttgcattgttgaaggatacaatgcatacttcagtttctcaaag
aagcgcagtggatattcaggtgttgcaactttctgtaggaatacagcagctcctgtcgca
gcagaggaagggctgtctggccttctgtcatcacacaatgcatcagccataggttgtcat
ggtgatacagcaaacttcactgatgaagaacttcagtcactagatgctgaagggaggagt
gtgatgacacaacatcagttgaagacatcagatgagaagttgctggatgtcgttattatt
aatgtttactgccctcgggctgatcgtgaaaaccaggagcgattcaattataaacttcgc
ttttacgaattgctgcaactgagggcagaagcactggtgaatgctggcagacatgtgatt
attgtaggtgatatcaatgcatcccacaagcctattgatcactgtgatcctgatgttgaa
aggattttcagattacatccaagcagacaatggctggacaaattcctgtataattctgaa
agcaaggctgaggtatcacaagtgcctaccaatcccaacgctgagagtgaacatgaagtg
cctactcctggttattttgttgactcctttcgatccttccatccagataggaaaaatgct
ttcacctgctggtcaacggtgaccagcgcccgccaaaccaactatggcacacgcatagac
tacatctttgctgacaaagacctattccatcaacagtttgttaactgtgatatcatgcca
gaggtggtgggttcggatcattgtcctgtaaaggctgaggtcagtggtacatgtgaagca
agcagtacttatccagcactttgtaccaaatttatgccagagtttcttggtaagcagcaa
aagttatccagcttcttccagaaggtttctccaagtaaacatttttcaggtttacttgca
actgatgataagaatgtgaagaaaagatccaatactgttgattctagtacaaccaataag
aataagaaaaagcagaaaacaggaccttcatctggaaatcttctcaactttttccaaaga
aaaacaaccacaagcagctcaatgaccagtgtacctcaaaaggcagagctagaaacaagt
aatataaacaaaagttctcaggattcaaatgcaatgagtaatgtaacagacaaatcagat
aaacagaatataggaactgatgaaagagatcagcgtgaaacacagtgctcctcacaagaa
tcatcatctaacgagaaatcagacagtaaaggtcagctgtcagctgggtggaagacgtta
ttcaaaggacttccacctgcacctctttgtaaaggtcataaagaaccctgtgtgttaaga
actgtgaagaaagcaggtattaaccgtggaaagaggttttatgtgtgcgccaaaccagag
ggtcataagagtaatccagaagcgagatgtgaccattttgaatggatgggcaagaagtga
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