Amphiura filiformis: 140148254
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Entry
140148254 CDS
T10871
Name
(RefSeq) HEAT repeat-containing protein 1-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
afil Amphiura filiformis
Pathway
afil03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140148254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140148254
NCBI-ProteinID:
XP_072026252
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Position
1:49214747..49277884
Genome browser
AA seq
2187 aa
AA seq
DB search
MTSLAQQLKKLAVPQAQSALGLPEKERKSLLFDAKEAANLDKETFYAIGANGFHELLNID
PSFAQFETNLFDEASKSFQRAVQNQELNQVLDQRIQSFLMRVSPYFLLRPAQKALEWLIY
RFHIHLYNTDDLVRCILPYHDSKIFIRVVQILSIKEETNKWHWLYPLQAPGVPLSKTALI
NHCYKDLGFLKFVCDTVSLATQDTSSTDGSLRTTFTFYTSTIVGAIEFASPLTENFIAAL
APYLVEGAKNKRFIDFNAATYMIISQLCLKATLKLMLLEPLMQCICKYMKPALSMEALSC
LALICQTQSLQSFPKKSFKLLCKKPALVDSLHQLSQVHNITPLLKLLLTQLVHSALDQSA
EGEELESYTLLSAMLSGVQLNGALANMVCRLLLTQYITLRQGITQKKLIKQLGQKFSPLI
QTLETRYCEAVDEAITTYMAGEREPGEKSYANEFVQLSVASAKHQVIGDSETSETTLVLS
LNHALATQRMMAVEHLRKTMQEGEEFDMSFLKASLLERLGDENLSVVAEVLMFEEKLCDI
IPPAELMEPLQKLLLRWRSKTKKSWLKVGQQILAIIISAKFLECAPSLRHRCAALLLPHL
FLASNETLAEDQEVILMLESSALVTKHPLLVKSSTVYSDVPSKVTKKYLSGKTNAMVELL
ASNLAGMEAKEQQLMVNTMLEYCHKKQAKLAAYRVLVATVLTRALHSIKNESQQLKMAHQ
LMDLLDEDVKKMQDPEFKMNETPESNAPTLDHTHDTLPTQYHGHLSRLLTSKRKTLKMGA
VSLDISQIEIVFWCLENLIVAVKMTKTLKKDKRWWTLSKSSEQEAEARYLTLLLRIFDSL
TQGAADSRLKKDPERFRNLIKTVLEHHLNSTAILFKFFALVWTSHCQRAEDMTYRVSALY
QARLLHMGCISIKSMQQDEVKKLLESESTVVPALLLALSSQLYPIRQAAIAGIHALHTSG
MEGASPLWHLVKAVTGSGQSIIDDADHLHKVLSTFFAKVTMDIQNMPATPSRKKKPRKGQ
TSEVPPANVCLDQLLIDITGENTPVFIQQTLLGLLLEVDNKVVFTSVLSMLSEILTEATQ
PESTLSYDKVMWAHHAVGHYTPATAECLVEESEALELLLKVMSIEGGLYGLESLQFRVLK
QISPGMYSAISNADIQQTLLAKLIDLQVDAKSSSVASRIGKTLRKLELEGDQLVSELNKV
DPESRAKSLRDAKKARLRAKAASSDSEATSADDRAWQRVSHILEHVQQRKMKRINNIQVL
VPALFNILAKCMEPDIAGTEMEYIKHLILTSLLTLCNKLSPDNKPIPQDILSESLFNVEL
IVKCIRTSDDPQTHNHALLLLATAAGIFPEHVLHNTMTIFTFMGASVLRKDDSYSFQVIT
KTIDSVIPALIKASEEKSLPAELSGGAIEIITMVMRVFVDALPHTPEHRRIPIFSQLMLT
IGGEEHLWRMLGLLIGSYATKGDAVIHPGEQIDTKDATRSMEFWLSLCEQFECDVIVSNL
IQLLKYLSTLPEEKDDEQPARRTKRTPAKKTAKSESENLFDVSRHTDRHLRQFKFATISF
LPQVLSSEHFVEQMIYLPSDKEDQLNDLFQRLLEESLRYITHVAHSVQRNANKATAKFWK
ALLHRSYEVLDKVNALLPAETFIQVVSGLLGNSLPTVRRKAMELLNNKLMNQKDYFDEDQ
IPLLLTLLGDLCTVAKSTKSSATSVEEVDINRQTALYSLKLLCKVIGHLYPKELQSVLDV
AVKTLKEDGLNQQVAASAMLCLAETFRSLQAHAIGHLPDCMPILLGVLENKQRMSSSDLH
LLSAVTSLQKIIETLPNFLSPYLLQLILQITKFSSNTEDEKSQLNLRLKAIRHRLATSVS
ARVMLPAIAQAYGDAADKRKESIGPLMSMLGDHMGALSNDDLHTYHSQIISFFLVALDYR
AKHTEMLLEEVGQIESCVINSLVSMVMKLSEATFRPMYLKLYDWASRGSSNKERLLTFYH
LSDCIVDRLKGLFCLFAGHIIPQSAELLNANNTAKTDESYFGDDHQATEKASLLLQYVLD
CLYKCFLYDKGGFVTKERFDCLMQPLADQIENTQGGESACQERITDHLRPCVAQLLVAAK
DSSSWQPLNYQVLLKTRHSSAKVRFGALTVLQELHIRLSEDYLSLLPETIPFMAELMEDE
SVEVEEKCQQVVSELEKTLGEPLQKYF
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacttgctcaacaattgaagaaactcgctgttcctcaagcacagagtgctctg
ggactaccagagaaggagaggaagtcacttttatttgatgctaaagaagcagccaacctt
gataaagaaactttctatgcaattggtgccaatggattccatgagttacttaacatagat
ccctcctttgcccagtttgagacgaacctatttgacgaagcgtccaaatcattccagcga
gccgtacagaaccaggaattgaaccaggtgctagaccagcgcatacagtcattccttatg
cgagtgtctccgtatttccttttgagacctgctcagaaggctctggagtggctgatatac
agattccacatccacctgtacaacacagatgatctggtgcgatgcattctaccataccac
gacagcaagatattcatcagggtggttcagatactcagcatcaaagaggagactaataaa
tggcactggctctatccattacaagcccctggagtgccattgtcaaagacagccttgatc
aaccactgctataaggacttgggtttccttaaatttgtgtgtgatacagtcagcttggca
actcaggataccagtagcacagatggttctctcaggaccacattcacattctacacgtcc
accattgtcggcgccattgaatttgctagtccgctcacggaaaacttcatcgcagctttg
gctccatatcttgtagagggtgccaagaataagcgattcattgacttcaatgcagccacc
tatatgatcattagtcagctatgtttgaaagcaacgctgaagttgatgttgttggagcct
ctcatgcagtgtatttgcaagtacatgaaacctgcattgagtatggaggccttatcttgt
cttgcactgatctgtcagacccagtctttacaaagctttcctaaaaaatcattcaaactt
ctttgcaagaagcccgccttagtggactcactgcatcagctgtcgcaagtgcacaacatc
acccctctgttaaagctgcttttaacccagcttgtgcatagtgccctggaccaatctgca
gagggagaagagttggaaagctacactctcctaagtgctatgttgtctggcgtgcagttg
aatggtgcattagccaacatggtgtgcaggttactattgacacagtacatcacattaaga
cagggcatcacacaaaagaagctgattaaacaactgggacaaaaattctccccgctgata
cagacgctagaaactaggtattgtgaggcagtagatgaggcgattacaacatacatggca
ggtgaaagggagccgggagaaaaatcatatgctaatgagtttgtgcaactgtcagtggcc
agtgcaaaacatcaggtgattggtgactctgaaacatctgaaacaacccttgtgctaagt
ttgaaccatgcattggcaacacagaggatgatggcagtggaacatttacgaaagactatg
caagagggtgaagaatttgacatgtcttttctcaaagcatctttgttagagcgacttgga
gatgagaatcttagtgtggttgcagaagtgctcatgtttgaggagaaattatgtgacatc
atcccacctgcagaactgatggagccactgcagaaactgctattgcgatggagaagcaaa
accaagaagtcttggttgaaagttggacaacagatcctagcaatcataataagtgcaaag
ttcttggagtgtgcgccatcattaaggcatcgctgtgccgctctgctgttacctcatctc
ttcctggcatcaaatgagactctagcggaagaccaagaagtcattttgatgttggagagc
tctgcattagtgacaaaacatcctctgttggtgaaatcatctacagtctattcagatgtg
ccttccaaagtcaccaagaagtacttgtcagggaagaccaatgcaatggtagagctacta
gcatctaatcttgctggcatggaagccaaagagcagcagctgatggtgaataccatgttg
gagtactgccacaagaagcaagcaaaattggccgcctacagggtcctggtagccaccgtt
ctcacaagggcactacattcaatcaagaatgagagtcagcagctgaaaatggcccatcag
ttgatggatctgctggatgaggatgtgaagaaaatgcaggatcctgaattcaagatgaat
gagactcctgaaagcaatgcaccaactctcgaccacacccatgacaccctacccacccag
taccacggccatctgtcacgtctcctgaccagcaaacgcaagaccctcaagatgggtgcg
gtcagcttggatatatcacagattgaaattgtcttctggtgtcttgagaatctcatagtt
gcagtgaagatgacaaagactttgaagaaagataaaagatggtggaccttgtcaaagtcc
tcagaacaggaagcggaagctcggtatctgacattgctgctgagaatctttgacagcttg
acccagggggcagcagacagtagactgaagaaggatccagagaggttcagaaacctcatc
aagactgtattggaacatcatctcaacagtactgccatactcttcaaattctttgcattg
gtatggactagtcactgtcagagagcagaggacatgacctacagggtgtcagccttatat
caggctagactcttacacatgggatgtatcagtatcaaatcaatgcagcaggatgaggtg
aaaaaactacttgagagtgagtctacagtcgttccagctcttctcctagccctatccagt
caactgtaccccatcagacaagccgctatcgcaggtatacatgccttacacacgagtggc
atggagggcgcttcaccattgtggcatttggtaaaggcggtaacgggatccggacaatcg
ataattgatgatgctgatcacctgcataaggttttatccacattttttgccaaagtaacc
atggatattcaaaatatgccagcaaccccatctagaaagaaaaagccccgcaaaggacaa
acaagcgaagtacctcctgcaaatgtctgccttgatcagttgctgattgacatcactgga
gaaaatacaccggtgtttatccaacaaacactgcttgggcttctcttggaagttgacaac
aaggttgttttcacctctgttctgagcatgctcagtgagatcctgactgaagcaacacag
ccagaatcaactctctcctacgacaaagtgatgtgggctcaccatgcagtggggcattat
acacctgccactgcagaatgccttgtggaagagtctgaagcattggaattacttctcaaa
gtgatgtcaattgagggtggtttgtacggcttggaatcactgcagttcagagtgcttaag
cagataagcccaggcatgtacagtgccatttctaatgctgatatacagcagacactgcta
gccaagctgattgatttgcaggtggatgcgaagagctccagtgtggctagtcgtattggc
aagacattgagaaagttggaacttgaaggtgatcaacttgtgagtgaattgaataaagta
gatcctgaatcgagagccaagagtctgcgggatgccaagaaagcacgactcagggccaaa
gctgcttcctcagattctgaagctacctcagctgatgatcgtgcatggcaacgtgtgagt
cacatccttgagcatgtacagcagagaaagatgaagagaattaacaacatacaggtcttg
gtgccagccttgttcaacatactggcaaagtgcatggaaccagacatagcaggtactgag
atggagtacatcaagcacctgatactcaccagtttgctcaccctatgcaataagctctca
cctgacaacaaaccaattccacaagatattttgagtgaatctctgttcaatgtagagctg
atagtcaagtgcatccgtacatctgatgaccctcagactcataaccatgcactgctgcta
cttgcaaccgctgctggtatattccctgagcatgtacttcacaacaccatgactatcttc
accttcatgggtgccagtgtgttgcgaaaagatgacagctacagcttccaagtcatcacc
aagactattgacagtgttatcccagcacttatcaaggctagtgaagaaaaaagtctaccg
gccgagctgtctggcggcgccattgaaatcatcaccatggtaatgcgcgtctttgtggat
gccctgcctcacacaccagagcatcgcaggataccaatatttagccagctgatgttgacc
ataggaggagaggagcatctatggaggatgttggggttgttgattggtagttatgctact
aaaggagatgctgtgatacacccaggagagcaaattgataccaaggatgcaactcgcagc
atggaattctggttatcattatgtgagcagtttgaatgcgatgtcatcgtatccaatttg
atccaactattgaagtatttatccacactgcctgaggagaaagatgatgaacaacctgca
cgtagaaccaagaggacccctgcaaagaagacagctaagtcggaatcagagaatttattt
gatgtgtccagacacactgatagacatctgaggcagttcaagtttgctaccatcagcttc
ttaccacaagttttgtcaagtgaacattttgtagaacagatgatatacttgcccagtgac
aaggaagaccagttgaatgatctgttccagaggttgttggaggaaagcttacgttacatc
actcatgttgcacacagcgtacaaaggaatgctaataaggccactgctaagttctggaag
gctttgctgcatagatcctatgaagtactggataaggtgaatgcactcctaccagcggaa
acttttatccaggttgtgtccggtctcctcggcaacagcctgcccactgtgagacgtaag
gccatggagctcctcaacaacaagttgatgaatcagaaggactactttgatgaagatcag
attccactcttactcactctcttgggagatttatgcaccgttgccaaatcaactaaatca
tctgcaaccagtgtggaagaagttgacataaatagacagactgccctatatagtctcaaa
ctcttatgtaaggtcataggtcatctgtaccccaaggagctgcaaagtgtgctggatgtt
gctgtgaagactttgaaagaagatggcttgaaccagcaggttgcagccagtgctatgtta
tgtttagcagaaacatttagaagcctacaggcccacgctataggacatctaccagactgt
atgcctatattacttggtgtgctggaaaacaagcagagaatgagcagttccgatctacat
ttgctgagtgctgtcaccagtctacagaagatcatagagacactgccaaactttttgagc
ccatatctacttcagctcatcttgcagattaccaagttttcaagcaatactgaagatgaa
aaatcacagctgaatctacgactaaaagccatacggcacaggttggcaaccagcgtatca
gccagggtgatgttacctgccatagctcaggcttatggcgatgcagctgacaaacgcaag
gagagcataggtccactgatgtctatgctaggagatcatatgggtgctttgagtaatgat
gacctccacacataccatagtcagatcatttccttcttcttagtggcattggactacagg
gctaaacacactgagatgttactggaagaggttggccaaattgagagttgtgtgatcaat
tcactggtttccatggtaatgaagttgtcagaagctaccttcaggcctatgtatctaaag
ctgtatgactgggccagcagaggcagcagtaacaaggagcgtttgctgacattctatcat
ctctcagactgtattgtggacagattgaaaggcttattctgtctgtttgctggtcatatc
ataccacagagtgcagaactactcaatgctaataacactgcaaagactgatgaatcctat
tttggagatgatcaccaagccacagagaaggcatcattgctcctacaatatgtacttgac
tgtctatacaagtgttttctctatgataagggaggttttgtcaccaaggagagatttgac
tgcctcatgcagccactcgcagatcagattgagaacacacagggtggtgagtctgcctgc
caagagcgcattactgatcacctgagaccgtgtgttgctcagctcttggttgccgcaaag
gattcatcgtcatggcaaccactcaactatcaggtgctattgaagaccagacatagctca
gccaaggtgagatttggtgcattgacagttttacaagaacttcatatcagactgtcagaa
gattatctctctcttctaccagagactattccattcatggcagaacttatggaagatgaa
tctgtagaagttgaagagaaatgtcaacaagttgtgagtgaattggaaaagacactaggt
gaaccattgcagaagtacttctag
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integrated database retrieval system
