Amphiura filiformis: 140148457
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Entry
140148457 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
afil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140148457
03015 mRNA surveillance pathway
140148457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140148457
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140148457
mRNA cycle factors
P-body specific factors
140148457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
140148457
NCBI-ProteinID:
XP_072026512
LinkDB
All DBs
Position
3:complement(37593088..37644697)
Genome browser
AA seq
2182 aa
AA seq
DB search
MEESEAKVDQEEVPVMEVVSGEDVKVKAGEEEQSESEVKIDKPEDKAKSETAECVSLTDS
AKEEKTVSVSNDVKELSVDPGNLKSADSLASAVVEAASEKQVDDKSTSETILPAEHEKQI
ASKDISVVDGLSKMSVEPVSGSSRTEVCRDADNAAEGSADNQQVSPKNDSNVVISETLDA
SRSAEPTKEDSYLQSEDQNLVGTTKCVKDVNSKIEETTAIHVKVTEIVKEEQSSIPESVE
RKDTNITQHPDTDELYEINKQENQSEKNMKETPAAVTVESTEAMKNDDKTDSRGEEKCRE
KEAEPEVIEETNKIPESGLKEDDKIKSNVEEKSHEVTAAVEQVDQLSNVQSEEMKTKDEH
KDSQSEKEKESVNVNNNAKGAREEKDRESGENKSSKDEEEPVRSKEAENKSDVLDTDTTK
VMPKTETVDETKASDADSQDTKSALKTNTVGEHKLDTKASDADSHNAKSVQKTETVDEQK
SETKVSDADSHDTKSVQKTETVDQKSDVKASESDSHNTKSVPKTTNVDEQKPGTKASESV
SHDTKSVPKTETVDEQKSDTKSSAADRPDTKSVKTTVNVDEQKSDTNASESDTMSVLKTD
AADEQKSDTKASDAIIKSDTKSVQKTATADEQTSDTKTSDADTKSEQKTDAVDEQKADTK
ASDSITKTVQKTETTGEQKPDTKASDSITKSKIDSVNDKKSETKELDKTLSSNKGSSTES
KQSIVTDTKDNRDVKDTRPSKSYSAQRNANRTNRRSGNVEEPKGGRTDSTKGSERTESTK
GSEANVRDDRRNRVEERRDKDRDRDRDRDRDKDREKDKNRDRDRDRDRDRDRNRDRDKDR
DRDQDRDRDRGQDGRGKDQQRDKGDQRKQKDQLIRAKVEMIDVTAEGQLRQAKKPGKAGP
ERKGNKKKQKEERKKKIGGRKEEDRKMMEEERKKREEEKKRKEEERKLKEEEERKQEEER
KAEEERKRQEEEQKRLEEEAARQKEEEEKHANEISVEAAERMEAKMEIRKKNLSAADIRP
DESFFTKLDSSLKKNTAFVKKLKVMTESQRLSLTKEFNTLNLTKYVGEVATSIAEAKLKM
SDISCAIHMCSVVHQRYAEFSSHLLQAIQKVLPALPSKKDKDKDEQKAIVFDSKIRTELR
FLAELIVAGVFTEKEGLPILNGVLSAILNSDKERHSNLPIIISFTKHCGEDFAGCVPRKN
RIIAEKYGLTLPISEVFSTQVKNAYTNLLKDHYASVTKYLLKKHTELQKLERQNMRMLQT
KGELSDERKKVHEETQALHQKLLMNTSTLADLIDEDVPDLPVDQKLQEENELMAMDFLLA
DGSTVEFDFETSLWEDEDTRTFHENLIELRTMVPAILFKDSVKQAAPGEKSEEDLDKFDE
DIQAMEVNESAQEAEEEEDDDEEEEIEGSKTEEDDMVESEEPETEEAEEEDDEEEGVTSN
VSMKVLLDAFLQKLPQCVNRDFIDKAAVEFCMNLNTKSNRKKLVKALFNVPRTRLDLLSF
YSRLVATLYPCMPDIATDLVERLKQDFRWHMRKKDQMKIESKIKIVRFLGELTKFKMCPK
ADTLQCLKQLLLVFHHHHIDMACNLLDVCGRYLYRSKDSHLRTKALLDLMMRKRNKMHMN
ERHSTMVENAFFYCNPPEAKQMEQKVRPPLHEYIRKLLFKDLTKITVEKVLKQMRKLPWN
DLEIRHYAVKCLGSVWNVKFNNVHCMANLLAGLVLYHDYIGIQVVDAVLEDIRIGMEINY
PKFNQRRVSVVKYLGELYNYRMVESSVVFKTLYSFLRFGITLDATIPSLLDPPEHLFRIR
LCCTLLDTCGQFFDRGTSKKKLDCFLVYFQQYILFKRGLELWKKDTHPFPLDVDNAIADT
FETLRPKLKLFTTLEEANTGVKELEKEYVEKLGDVINLTRANANQAQQPGGPLTTITEGD
ENSVGTPPGGRRLSFTTTGTEDEEESDSDMDSERVRRPGRGSNPNSQSQGLSQNTEEAGY
DTEENILLESAGENEEDDRVTVLTGGPRFVKCEEDDEFTSAFDKMMCDNIQQRTVEAAKV
PQLDISVPVASRNKPKKTYDLFQQEAEDVPVTMNFTLMTRSGKKQQYHDFEVPIVSELAA
NLRNREMAEMAEKQRLKQLTLHINERQEEEDYQEMIASLQKPAMATPGVVAPAPTVRKPR
FHHPKGAPDVDQIFHQTGNRKW
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctgaggccaaagtagaccaagaagaggtgccagtgatggaggtagtctct
ggtgaagatgttaaagtaaaagctggtgaagaagaacaaagtgaaagtgaagtaaaaatt
gataaacctgaagacaaagctaagtcagaaactgcagagtgtgtaagtttaacagattcc
gcaaaagaagaaaagactgtaagtgtgtctaatgatgtcaaagagcttagcgttgatcct
ggtaatctaaagtctgcagactcccttgctagtgcagtagttgaagctgcttcagaaaaa
caagttgatgacaaatccactagtgaaacaattcttcctgctgaacatgaaaaacaaatt
gcttcaaaagatatttcagttgttgatggattgtcaaagatgtctgtagagcctgtgtca
ggatcaagtcgaacggaagtgtgtagagatgcagacaatgctgctgagggatctgctgat
aatcagcaagtgtctcctaagaatgactcaaatgtagtcatatctgagactttggatgct
tcaagatctgctgagcctacaaaagaagactcatatttgcaaagtgaagatcagaatctt
gtcggaacaaccaagtgtgtgaaagatgtaaatagcaaaatagaagaaactactgctatc
catgtaaaggtaactgaaatagtcaaagaagaacaatcatctattccagaatcagtagaa
agaaaagatactaatataacacaacatccagacactgatgagttgtatgaaataaacaaa
caggaaaatcagtcagagaagaatatgaaggaaactccagcagcagtgactgtagagtca
acagaagcaatgaagaatgatgataaaacagatagtaggggtgaagaaaagtgtagagaa
aaggaagcagaaccggaagttattgaagaaacaaataaaatacctgaatctggtctcaaa
gaagatgataaaattaaatcaaatgtggaagaaaaatctcatgaagtgacagctgcagtt
gaacaagttgatcagctgtcaaatgtccaaagtgaagaaatgaaaacgaaagatgaacat
aaagattctcaatcagagaaagaaaaggaatcagtaaatgtcaataacaatgctaagggt
gccagagaggaaaaagacagagagagtggtgaaaacaaaagtagcaaagatgaggaggag
ccagtaaggagcaaagaagcagaaaataaatcggatgtattggatactgataccaccaag
gtaatgccgaaaactgagactgttgatgaaacaaaagcgtcagatgcagatagtcaagat
accaagtcagcgctgaaaacaaatactgtaggtgaacacaaattagacacaaaagcttca
gatgcagatagtcacaatgcaaagtcagtgcagaaaactgagactgtagatgaacagaaa
tctgaaacaaaagtatcagatgcagatagtcatgatacaaagtcagtgcagaaaactgag
actgtagatcagaaatcagacgtaaaagcttcagaatccgatagtcacaataccaagtca
gtgccgaaaactacgaatgtagatgaacagaagccaggcacaaaagcttccgaatctgtt
agtcacgataccaagtcagtgccaaaaactgagacagtagatgaacaaaaatcagacaca
aaatcatcagctgcagatagacctgataccaagtcagtgaagacaactgtgaatgtggat
gaacaaaaatcagacacaaatgcctccgaatctgatacaatgtcggtgctgaaaactgat
gctgcagatgaacagaaatcagacactaaagcttcagatgctattattaagtcggatacc
aagtcagtacagaaaactgctacagcagatgaacaaacatcagacacaaaaacttcagat
gctgataccaagtcagaacagaaaactgatgctgtggatgaacagaaagcagacacaaaa
gcttcagattccattaccaagacagtgcagaaaactgagactacaggtgaacagaaacca
gacacaaaagcttcagattccattaccaagtcgaaaattgattcggttaatgacaaaaaa
tctgagacaaaagaacttgataagactctatctagcaataaaggctcatccacggagagc
aaacaaagtattgtcacagatactaaggataatcgggatgtgaaggatactagaccaagc
aagtcctattcagcacagaggaatgccaatcgtaccaacaggagaagtggcaatgttgaa
gagccaaaagggggaagaacagatagtacaaaaggaagtgagaggacagaaagtacaaaa
ggaagtgaggcaaatgtgcgggatgacaggaggaatagagtagaagaaagaagagataaa
gatagagacagggacagggatcgggacagagataaagacagggaaaaagacaagaataga
gatagagacagggatcgagatagagatcgggacagaaatcgagacagggacaaggatcga
gatagagaccaagacagagatcgagatagagggcaagatggaagagggaaagatcagcag
agagacaaaggagaccaaaggaagcagaaagatcaactgataagagcaaaagtagagatg
atagacgtgacagcagaaggtcaactccgccaagccaagaaaccaggaaaggcaggacca
gagaggaaagggaacaagaagaagcagaaagaagaaagaaagaagaagataggaggaaga
aaagaggaggatagaaaaatgatggaggaggaaagaaagaaaagggaagaagaaaagaag
aggaaagaagaagaaagaaagctgaaggaggaagaagaaaggaaacaggaagaagaacga
aaagcggaggaggaaagaaagaggcaggaggaagagcagaagcgactagaagaggaggca
gccaggcaaaaagaggaagaggagaaacatgccaatgagatatcagtagaagctgccgaa
agaatggaagccaaaatggagataagaaaaaagaatttgtctgctgcagacatcagacca
gatgaatcgttttttaccaaacttgactcaagtctcaaaaagaacactgcatttgtgaag
aaactgaaagttatgacggaatcacaacgcctatctttaaccaaagaattcaacaccctc
aacctgaccaaatatgttggcgaagtagccacatcaattgcagaggccaagttaaaaatg
tctgacatcagctgcgccatccatatgtgttctgtggtgcatcaacgctatgcagagttc
tccagtcatttgttacaagcaatacagaaagttcttccagctttaccttcaaagaaagac
aaggacaaggatgagcagaaagcaattgtatttgacagtaaaattcgaacagaactaaga
ttccttgctgagctgattgtagcaggtgttttcactgagaaggaaggtcttcccatactc
aatggtgtcttgtcggctatcttgaattctgacaaagaacgtcacagcaatctaccaata
ataatcagtttcaccaaacactgtggggaggactttgctgggtgtgtgccacgtaaaaac
agaatcattgcagagaagtatggcctgaccctacccatcagtgaagttttttccacacaa
gtgaaaaatgcctacacaaatctgttgaaagatcactatgcatctgttaccaaatacctc
ctcaagaaacatacagaattgcaaaagctagagaggcaaaatatgagaatgctgcagaca
aaaggtgagctcagtgatgagcggaagaaagttcatgaagagacacaggctttgcaccaa
aagcttctcatgaatacatcaacactagcagacctaatagatgaggatgtgcctgactta
ccagttgatcaaaaactgcaagaagagaatgaactgatggccatggatttcctcctagct
gatggtagcaccgttgagtttgactttgagacatcgctttgggaggatgaagacaccaga
accttccatgagaatctgattgagctgaggactatggttccagcaattttgtttaaggat
agtgtaaaacaagctgctcctggtgaaaaatcagaggaagacttagacaagtttgatgaa
gatattcaagccatggaagttaatgagagtgctcaagaggcagaggaggaggaggatgat
gatgaggaagaagagattgaaggaagcaagacagaagaagatgacatggtagaatcagaa
gaaccagaaactgaagaagcagaagaggaggacgatgaagaagaaggtgtgacgagtaat
gtcagtatgaaggtgttgttggatgccttcctacaaaaattaccacagtgtgttaatagg
gacttcattgacaaggctgcagttgaattctgcatgaatctgaacaccaagtcaaatcgt
aagaagctggtcaaggcattattcaatgtaccacgtaccaggttggatctattgtctttt
tattctcggcttgtggcaacactatatccatgtatgcctgacatagcaacagatctagta
gagagacttaaacaagacttcagatggcatatgaggaaaaaggatcagatgaaaattgag
tcaaagatcaagattgtcagatttcttggtgaattaaccaagtttaagatgtgccccaag
gctgacaccctacagtgtctcaagcaactccttttagtctttcatcatcatcacattgat
atggcgtgcaatctactagatgtctgcggaagatacctgtacagatcaaaggattcacat
ctgaggacaaaggcacttctggacttgatgatgagaaaaagaaataagatgcatatgaat
gagagacacagtactatggttgagaatgccttcttttactgcaatcctccagaagctaag
cagatggagcagaaagttcgccctccactccatgaatacattcgtaagctgcttttcaag
gatcttacaaagattacagttgaaaaggtactgaagcagatgagaaaactgccatggaat
gatttagagatacgccattatgcagtcaagtgcctaggcagtgtgtggaatgtaaaattc
aacaatgtccattgtatggcgaaccttctagcaggtcttgtgctctatcatgattatata
ggcatacaagtagtagacgctgtgttagaagatatcaggattggcatggagatcaactat
cccaagttcaaccagcgtcgtgtgagtgtagttaaatacttgggtgagctgtacaactat
cgcatggtagaatcgtccgtcgtattcaagacactctatagcttccttagatttggtata
acattagacgcaaccataccaagcctgttagacccgccagaacacttgtttcgtatccga
ttatgttgtaccttattggatacatgtggacagttctttgataggggcactagcaagaag
aaattggattgtttcttagtgtattttcagcaatatattctattcaaacgtggccttgag
ttatggaagaaagacactcaccctttcccattggatgtagacaatgcaatagcggataca
tttgagaccctcagacccaaactaaagttgtttactactttagaagaagctaacacagga
gtgaaagaattagaaaaggaatatgtggagaaactaggggatgtgatcaacctgacacga
gctaatgccaatcaagcacaacaacctggtggacctcttacaaccatcactgaaggagat
gaaaacagtgtaggaacaccacctggtggacgtaggcttagctttactacaacagggaca
gaggatgaagaggagtctgattcagacatggattctgaacgtgtgaggagaccaggccgt
ggtagtaatcctaacagtcagagtcaaggactcagtcaaaatactgaagaggctgggtat
gacacagaagagaatatactgctggaatcagctggagagaatgaagaagatgacagggtg
actgtgttaacaggaggaccaagattcgtcaaatgtgaagaagatgacgaattcacttca
gcctttgataaaatgatgtgtgataacatacagcaacgtactgttgaggcagccaaggtc
ccacaactcgacatcagcgttccagtggcttctagaaataaacccaagaagacttatgac
ctattccagcaggaggccgaggacgtaccagtcacaatgaactttaccttgatgacgcgt
agtggcaagaagcagcagtatcatgactttgaggtgccaatcgtatccgagctagcggcc
aatctgcgtaacagagaaatggcggagatggcagagaaacagagactgaaacaattaaca
ctacacatcaatgagagacaagaagaggaagattatcaagagatgatagccagccttcag
aaaccagcaatggctacaccaggtgttgttgcgccggctcctactgtacggaaaccaaga
ttccaccatcctaaaggagcaccagatgtggatcagatattccatcaaacaggcaacagg
aaatggtag
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