Amphiura filiformis: 140148467
Help
Entry
140148467 CDS
T10871
Name
(RefSeq) pseudouridylate synthase TRUB1-like
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afil03016
]
140148467
Enzymes [BR:
afil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
140148467
Transfer RNA biogenesis [BR:
afil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
140148467
Prokaryotic type
140148467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
140148467
NCBI-ProteinID:
XP_072026538
LinkDB
All DBs
Position
3:38547388..38555784
Genome browser
AA seq
253 aa
AA seq
DB search
MVPMQLLRQGGLFAVIKPKCVTSANVVDQLKPIIFGSDNRAGLRPRPKVRVKIGHGGTLD
KNASGVLVIGLGQGTKSLKQMLQGKKKYSVIGCLGSGTDTMDAGGKVTEAAPYDHIKQED
IEKVLQLFRGSILQVPPVYSALKVGGKRMSDLVMEGHDVEPKPARPVMVYHLSCTAFDSP
YFHLDVTCGGGFYVRSLVSDVGKAVGSCAHVKELCRTQQGPFTLNQALKECDWTFDNITK
ALIDPRKLVEEIR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggttcccatgcagttgctaagacaaggtggactatttgctgtgataaaaccaaaatgt
gtcacatcagccaatgttgtggaccaattgaaacctataatatttggatcagataacaga
gctggtttgagaccaagaccgaaggttagagtgaagattggtcatggaggaacactagac
aagaatgccagtggcgtccttgtgatagggcttggacagggcacgaaatctttgaaacaa
atgcttcagggaaagaagaaatacagtgttattggatgtcttggctcaggaacagacaca
atggatgcaggtgggaaggtgacagaagcagctccatatgatcacataaaacaggaagac
attgagaaagtactacaactattcagaggctccattcttcaagtcccaccagtgtattct
gctctgaaagttggaggtaaacgtatgtctgatcttgttatggaggggcatgatgtagaa
cccaaaccagcaagacctgtcatggtgtatcacctatcttgtactgcctttgattcacca
tattttcatctagatgtgacttgtggtgggggtttctatgtgagaagtcttgtcagtgat
gtgggcaaggctgtaggcagttgtgctcatgtgaaggaactatgccgtacccaacaagga
ccttttacactgaatcaagctttgaaagaatgcgactggacatttgataatataactaag
gctttgatagatccaagaaaacttgtagaagaaatcaggtag
DBGET
integrated database retrieval system
