Amphiura filiformis: 140148728
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Entry
140148728 CDS
T10871
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
afil Amphiura filiformis
Pathway
afil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140148728
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afil01009
]
140148728
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140148728
03029 Mitochondrial biogenesis [BR:
afil03029
]
140148728
Protein phosphatases and associated proteins [BR:
afil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140148728
Membrane trafficking [BR:
afil04131
]
Autophagy
Autophagosome formation proteins
ULK complex
140148728
Mitochondrial biogenesis [BR:
afil03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
140148728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
140148728
NCBI-ProteinID:
XP_072026877
LinkDB
All DBs
Position
3:53640892..53705967
Genome browser
AA seq
1444 aa
AA seq
DB search
MLYVFQVNTGTMLTLDMALTMESVQRLQESIEIEYQIPVDKQVLLISGGQSLDPQMRVCS
YSAGTDTNPIFLFSKGTIESATPPITSSISQGKEENLKFQVEGLKNLPHSYSAVVSRTQL
ALQFHDLAKEKLKSCEALVLDQHQQQQGWMAVVANLEDITSAFEQRSRVFQQNMTEFLKE
RPDLVERLTQFSDILQLLEKTPLLPCLMGEGVMCMGDGDGTENDSLDSGMTLMKWISSQD
QRSTLQQMALQCSKALDQFSQQVLDTIAADMTTTMESVNNPSMKEVKGLGDRLFGLEQLL
VGAKKYLQEQAEMAQGMVQNQTRASNINDDSVLPDLCKSHQQQLTVMYKKHCQLTEISRR
CQAAKEELCQNLHVRLRWIMYVEQQISGVHGKMVVYHENLKRLRKRLEIVRQVCAAPELY
ANAVVEVYRRKIFGSRFHEWAGQVSGTSISSHQEEVARRKEFASSMDRHFLNALFPGLGE
FPPMFATQIPSLFDTKLPDITMNDIELLRRQIPELATSLEVPPVEEFVISKDDSEDKNWI
DIETQTHSLVMVAKEMGDTDIVVIERDGQKDVRKEKISLETSSIEVLPLTENGLVVTNID
DLNDDDPDTPTSLTAETPTRLEGSGSSPSRPDELIMKSFEPKQLESFVSAPTTPDSIADM
EMSARGETPFASLLAGGVPSGVTSPASVGGASFVSGPDGYFYSAVTSPASERFAFASNPA
SYRSSPISVDHVTLEELDKLKLTLQETELKVVKLEESSKSIVDEMLAKDQALQKAQDEAQ
RTSSELEKSQGLVLDLGKCLKCELPKLKEKCVELQNTVGLEKDNFSGGLKALMGDYQRIS
EIVQSCLTEEKQIIIKETVDTLKADHVKEIDALKLQLQEVSRSLDETNIELGQNQEALKL
KAIEVDMIRENSAKEVNEIKTKMESEQEEAISALRMELAMELSDLETDNQDKTKQLEDLK
SSTDAELKELQGRLVTEKSEAVDEIKKEWEEKHKLEMDALEKRLQETQLSELSEFQKTHQ
LKVDAACEELRTTMEDEQTTEANALRTEIEKLQETLSQLKVEQQADIAKLTDEHKVEVDN
LKEDIVAMKTEHKKAMEEQSLKVSQMEVSFITEKQSSTLAQIEEERRQHKEEMNRLREEL
DRERNIAVADALGAANEVHAQEMEEVMKRSTDSSSGLLDNRNTVVETAERQVSFNEAINR
VASEKDKQIEMLKTKEARLVAEQNRNKDTIEKLLTDKVDLDSEMSSALHESRDAEKEAKA
LLEEKEKEIEDLQQRLDEIQRKQDSPAELPVAADSDSKALDPTSQDKLRVLLRAKEQECN
TLKQQLVQLRSITSHGGKSEKISIMDISSGDLVLIFFEEPRENYVVFSVEPTLYFVHSES
LTALGLKQHGSSGPKRQWIIGRVTDKEYCQAKKAQNRFKVAMGTKFYRVKAVRYDLKQEQ
AEKK
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgtatttcaagtcaacacaggcactatgctgacactggacatggcactgacc
atggaaagtgtacagcgtttacaagagagcatagagattgaataccagatcccggtagat
aaacaggtgctacttattagtggtggacaaagcttggatcctcaaatgcgagtctgcagt
tacagtgctggaacagataccaatcccattttcttattcagtaaaggtaccatagagtca
gccaccccacctatcactagtagtatatcacaaggtaaagaagagaacctcaagttccaa
gtagaaggcctcaagaatctaccacacagctacagtgccgtggtctccagaacgcaacta
gcactgcaatttcatgatttagctaaagagaaattaaagtcctgtgaggctttggtgttg
gatcaacaccagcagcagcaaggctggatggcagttgtagctaatctggaggatatcaca
agtgcctttgagcagaggtctagagtgtttcaacaaaacatgacagagtttctgaaggaa
cgtccagatctagtagaacgactgacacagttcagtgacatccttcagctgcttgagaag
acaccacttcttccttgtctgatgggggaaggtgtgatgtgtatgggagatggtgacggg
acagagaatgattcattggacagtggcatgactcttatgaaatggattagtagccaggat
cagcgtagtacactgcaacagatggcattacaatgttccaaggcattagatcaattcagt
cagcaggtattggatactatagctgccgatatgacaacaaccatggaatctgtcaataac
cctagcatgaaagaggtcaaaggtcttggagacagattatttggattggagcagctactt
gtaggtgcaaagaaatatctacaagagcaagcagaaatggctcagggtatggttcaaaac
cagaccagggccagcaatataaacgacgactccgtcctgccagatttatgtaaaagtcat
caacagcagctgaccgtaatgtacaagaaacactgccaactgacagagatcagtcgccga
tgccaagctgccaaagaggaactctgccagaacttgcatgttagattaagatggataatg
tacgttgagcaacaaatcagcggagtacatgggaaaatggtagtctatcatgaaaacctc
aagagacttcgtaagaggctagaaatagtgagacaagtgtgtgctgccccagaactttac
gccaatgcagtagtagaagtttaccgacgcaaaatatttggtagcagatttcatgagtgg
gcaggtcaagtgagtggaacatcaatttcatcacatcaagaagaggttgcaaggcgtaaa
gaatttgctagcagtatggataggcatttcttgaatgcactcttccctggacttggggaa
ttcccaccgatgtttgctactcaaatccctagtttatttgacacaaagctgcctgatata
accatgaatgatattgaattgctgcgaagacagatacctgaactggctacatcattagaa
gttccacctgttgaagaatttgtcatttccaaggatgattctgaagataagaactggata
gatatcgagactcaaactcatagccttgtcatggttgcaaaagaaatgggtgacacagac
attgtggttattgaaagagatggacaaaaagatgttagaaaagaaaagatcagcttagaa
acatcaagtatagaggttttaccattaacagaaaatggccttgttgtaactaacattgac
gatttgaacgatgacgatcctgatacacccactagccttacagctgaaacacccactaga
ctagaagggtctggttcaagcccaagtagaccagatgaacttataatgaaatcttttgaa
cccaagcagttagagagttttgtatcagctccaactactccagatagtattgctgatatg
gagatgtcggcaagaggtgaaacgccatttgcttcgttgctggcaggtggcgtcccatct
ggagtgacatctcctgcatctgtaggtggagcatcttttgtgtctggaccagatggctat
ttctactcggcagtaaccagtccggcgagtgaacgatttgcatttgctagtaatccagct
tcgtacaggtcaagtcctatctcagtggatcatgtaactctagaggaattagataagttg
aaactaacacttcaggaaacagagctaaaagtagtgaaacttgaagagtcatctaaatca
atcgtagatgaaatgttagctaaggaccaggcacttcagaaagctcaagatgaagcacaa
agaactagtagcgaattggagaaatctcaaggattggtactagatttagggaaatgtttg
aaatgtgaactccccaaattgaaggaaaagtgtgtggaattacaaaatacagtaggttta
gaaaaggataacttcagtggtggattaaaggccttgatgggggattaccaaagaattagt
gaaattgtgcaatcttgcttaacggaagaaaaacagattattatcaaggaaactgttgat
acattgaaagctgaccatgtcaaggaaatcgatgctttgaaactgcagttacaagaggtg
tcaaggagtttagatgagaccaacatagaattggggcaaaaccaggaagctttaaagctt
aaagctattgaagtggacatgattcgagaaaatagtgctaaagaagttaatgaaatcaaa
accaagatggagtcagaacaggaagaagcaatttcagctttaagaatggaattggcaatg
gagttatcagatttggaaaccgacaatcaggataaaactaagcagctagaggacttgaag
tcatccacagatgcagaattgaaggaattgcaagggagattggtaacagagaaatctgaa
gctgttgatgagatcaagaaagagtgggaagaaaaacataaactggagatggatgctctt
gagaaaagattacaggagactcaactgagtgagctgtctgaattccagaagactcaccag
ttgaaagtcgatgctgcgtgcgaagaactccgtacaactatggaagacgagcaaacgacc
gaggcaaatgccttgagaacagaaattgaaaagttacaagaaacactgtcccagcttaaa
gttgaacaacaagctgatattgcaaagctcactgatgagcacaaagtagaagtagataat
ctgaaggaagatattgttgctatgaagacagaacacaagaaagccatggaagagcagagt
ttgaaagtcagtcagatggaagtgtcgtttattaccgaaaaacaaagttctacattggcg
caaattgaagaagagcgtaggcaacacaaggaggagatgaatcggttacgagaggagctt
gatagagaaagaaacattgctgttgcagatgccctaggtgctgccaatgaggtccatgcc
caggagatggaagaggttatgaagaggtcaacagattccagcagtggtttattggacaac
aggaatacagttgttgagactgctgagagacaggtgtcatttaatgaagctatcaataga
gtagcatctgagaaggataaacaaattgagatgctcaagactaaggaggcaagattagtg
gcagaacagaatcgtaataaagatacaattgaaaagcttttaactgataaggttgactta
gactctgagatgagcagtgcccttcatgaatccagggatgctgagaaggaggctaaggct
ctcttagaggaaaaggagaaggaaattgaagatctgcagcagagactagatgagattcag
agaaagcaggacagtcctgctgagctaccagtcgcagcagacagtgattcaaaagcatta
gacccaacgtcacaagataagctacgagtgctacttagagccaaggaacaagaatgcaat
actcttaaacaacaactagttcaactcaggtcaataaccagtcatggcggcaagtcagag
aagatatccataatggatatatccagcggtgacttagtacttattttctttgaagaaccc
agggaaaactatgtggtattcagtgtagagccaactttatattttgtccactccgaatct
ctcacagcccttggtctcaaacaacatggttccagtggcccaaaacggcaatggatcata
ggcagagttacagataaagaatactgtcaagccaaaaaggcacagaatcgttttaaggta
gccatgggaaccaagttttaccgtgtaaaagcagtacgttatgacctgaagcaagagcaa
gcagaaaagaaatag
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