Amphiura filiformis: 140148838
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Entry
140148838 CDS
T10871
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afil03036
]
140148838
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
afil00535
]
140148838
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140148838
Meiosis-specific proteins
Cohesin complex and associated proteins
140148838
Proteoglycans [BR:
afil00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140148838
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
MFD_D3
AAA_29
HTH_NOL4_2nd
Motif
Other DBs
NCBI-GeneID:
140148838
NCBI-ProteinID:
XP_072027015
LinkDB
All DBs
Position
3:59055167..59080146
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AA seq
1207 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVEPFSPKHNVVVGRNGSGKSNFFYSIQFVLSDEFNNLRPEQ
RQSLLHEGTGPRVISAFVEIVFDNSDNRIPIEKEEVTLRRVIGSKKDQYFLDKKMVTKTD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKSESQIILK
ETEGKREKIEDLLKYIEERLQTLEEEKEELKQYQKWDKMRRSLEYTIHNQELMDTRKKLD
DLANKRDNSGEMTRQLRDAQEEASKRIKTINKECRELKSRIRAANEERDQLSNEKQDLFK
KRAKLELVLKDLQEEVKGDVDAKVVLEEKLEKLDMAINAKQQELEDVMPRYEELKKQEEQ
STQRLQACEQRRTELFAKQGRGNQFTTREDRDKWIRKELKSLNKSIKDKDEQISRQREDI
TTDMKRNEELEARMAKLNIDIEQMKDTVEASNRGHYDLKKRKDELQNERNSLWRQENSIQ
QEIATTKDELHKKEQTLRSMTGKAVLRGIDSIKKVLDTFRNKNIHKDVLEGYHGILIENF
QCASRFNTCVEVTAGSRLFYHIVDTDIISTKILTEMNKNKLPGEVSFMPLNRLEVRPTHY
PESPDALPMVSNLTFDKRFDFVFEHVFGKTLICRSMEVAAQFSRTQNLDCVTLEGDQVSR
KGAITGGYYDTRKSRLELQSSIVELRQKLAREEQEYEELRDKLSRVEVEITTMMSDMQKI
ETKNRKNKDIYEQMRSDMRIMKEESQVIQRALTPKEKRLSSLQASLEAMRGTAQSLEEEL
GTDLLSQLSVADQREVDQLNDEIKSLNQKNKEALAERIKLEGLKNKVSNQLSGNLMRKRE
QLVMELQEISVEDRKQKLENSTREQQSLETAVETNKARLEDIESTLDGLNRDQGNKLGDL
DDWKAKEREYGDKITDDTKSLEKMTNKQSLLIKKKEECMHKIRELGSLPSDAFEKYTKLS
IKQLFKKLEQCNAELKKYSHVNKKALDQFVNFSDQKEKLIKRKEELDKGHAAITDLMNVL
ELRKYEAIQLTFKQVSKYFSEVFASLVPGGRATLVMKKGDSDSSQGLDSEGSSQSDIPLV
EQFTGVGIKVSFTGRAGETREMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDSALD
AQHRKAVADMIHKLSDNAQFITTTFRPELLESCDKFYGVKFRNKVSHIDVISKDQAQDFL
EDDITHG
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggttatcattcaaggtttccgtagttacagggaccagaccattgtg
gagccttttagtcccaaacataatgttgttgttgggcgtaatggatctggcaagagtaac
ttcttttattcaatccagtttgtactcagtgatgaatttaacaaccttcgtccagagcag
cggcagtccctgcttcatgaaggcacagggccaagggtcatctctgcattcgtggagatt
gtatttgacaactcagataataggataccgattgaaaaagaagaggtgacattaagaaga
gtgattggttcaaagaaagaccagtacttcttggacaaaaagatggtcactaagacagat
gtgatgaatcttcttgagagtgcagggttttcacgcagtaatccatactacattgtcaaa
caaggaaagatcaatcaaatggccacagcaccagattctcagcgcttgaagctccttagg
gaagtggccggtaccagggtatacgatgaacgcaagtcagagagtcagatcatcttgaag
gagacggagggcaagagagagaagattgaagacttgttgaaatacattgaagagaggttg
cagacattggaggaggagaaagaagaattgaaacaataccagaagtgggataaaatgagg
aggtccctggagtacacaatccataatcaggaactgatggacacaaggaagaaattagac
gatcttgccaacaaacgagacaacagtggagagatgacaaggcagctgagagatgcacag
gaagaagcctccaagaggattaagaccatcaacaaagaatgccgagagctgaagagtcga
ataagggcagccaatgaggagcgagatcagctgtccaatgaaaaacaagatctgttcaag
aagcgtgccaaactggagctggtgctgaaggatttacaagaggaggttaaaggtgacgta
gatgctaaggttgtcctggaagagaagcttgaaaagttagatatggctatcaatgctaag
cagcaagaactggaggatgtgatgccacggtatgaggaactcaagaaacaggaggaacag
agtacacaaaggttgcaagcctgtgagcagagacgcacagaattgtttgccaaacagggt
cgtggaaatcagttcacaacgagagaagacagagataagtggatccgtaaagaactcaaa
tcactcaacaaatccatcaaagacaaggatgaacagatttcacgacaaagagaagacatc
accacagatatgaagaggaatgaggagctggaagcacgcatggccaaactcaacattgat
atagaacagatgaaggacacagtggaggcatccaatcgcggtcattatgacctgaagaaa
cgcaaagatgaactgcagaatgagagaaattctctttggaggcaggagaacagtatccag
caagaaatagcaaccaccaaggatgaacttcacaagaaggaacagacattaagatcgatg
acagggaaggcggtgctccgtggtatagacagtatcaagaaagtactggacacattccgt
aacaaaaatattcacaaagatgtcttagagggttatcacggtatcctgattgagaacttc
caatgtgcatctaggtttaacacatgtgtagaggttacagcaggaagcagattattctac
cacatagtagatacagacattataagtaccaagatcttaacagaaatgaacaagaataag
ctaccaggggaggtgtccttcatgccactcaacagattggaggtcaggcccacccactat
ccagaatcaccagatgcactgcccatggtatccaacctgacgtttgacaaacgctttgac
tttgtctttgaacatgtgtttggtaagacgttaatctgccgcagcatggaggtagcagca
cagttctcacggacgcagaacttggattgcgtgacactggaaggtgaccaagtaagcagg
aaaggtgctatcacaggaggttattacgacactcgcaagtcacgtctggagctacagagc
agcatcgtagagctgcgacagaaactagctcgtgaggagcaagagtacgaggagttgaga
gataaactttcacgggtagaggttgaaataactaccatgatgagtgacatgcagaagata
gagaccaaaaataggaaaaataaggatatctatgagcagatgcgaagtgatatgcgcatc
atgaaggaagaaagccaggtcatccagagggcgctcacacccaaagagaaacgtctgtct
agtttgcaggccagtctggaagctatgagaggaacggcccaatcattggaggaagaatta
ggtactgaccttctgtcacagttaagtgtagcggatcagcgtgaggtagatcaactcaat
gatgagatcaagagcttaaaccagaagaacaaggaagcacttgcagagagaattaagttg
gagggtttgaagaacaaagtttccaatcagttatcaggtaacctgatgagaaagagggaa
cagctggtgatggaactgcaggaaatctctgtcgaagaccgcaaacagaagttggagaac
agcactcgagagcagcagtcactggagactgcggtagagaccaacaaagctaggttggaa
gacattgaaagtaccttagatgggttgaatcgtgatcaaggtaacaaattgggtgactta
gacgactggaaggcaaaggagagagagtatggagacaagattactgacgacactaaatca
ttagagaagatgaccaacaagcagagtttgcttattaagaagaaagaggaatgtatgcac
aagattcgggagcttggttcgctgccaagtgatgcctttgagaagtataccaaattatcc
atcaagcagctattcaagaaactggaacagtgcaatgcggagctgaagaagtatagccat
gtgaacaagaaggccttggatcagtttgtcaacttttcagatcagaaggagaaacttatc
aagaggaaagaagaactggacaagggacatgcagctatcactgacctaatgaatgtatta
gaattgcgtaaatatgaggccattcagctgacgttcaagcaagtatccaagtacttcagt
gaagtatttgcatcactggtaccaggaggtagagctacattggtgatgaagaaaggagat
agcgactcatctcagggactggacagcgagggttcttcacagtctgatatcccgcttgta
gaacagtttactggagttggaattaaggtgtcgttcacaggcagggctggtgagacccgt
gagatgcagcagctgtctggtggccagaagtctctggtagcattgactctgatctttgct
atccagaaatgtgatcctgcaccattttacctgtttgatgaaatagactcagccttggat
gcccaacatagaaaggcagtagcagatatgatccacaaactgtctgacaatgctcagttc
atcacaactacattcagaccggagctcttggaatcctgtgataaattctacggtgtcaaa
tttaggaacaaggtgagccacatcgatgtcatcagcaaggaccaggcccaggacttcttg
gaggacgacataacccacggctaa
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