KEGG   Amphiura filiformis: 140149084
Entry
140149084         CDS       T10871                                 
Name
(RefSeq) beta-TrCP-like
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
afil  Amphiura filiformis
Pathway
afil04120  Ubiquitin mediated proteolysis
afil04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140149084
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    140149084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afil04121]
    140149084
   03036 Chromosome and associated proteins [BR:afil03036]
    140149084
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     140149084
Chromosome and associated proteins [BR:afil03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     140149084
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_C WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_HPS5 F-box WD40_like Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR11_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_2 KNTC1_N Beta-prop_NWD2_C DUF1513
Other DBs
NCBI-GeneID: 140149084
NCBI-ProteinID: XP_072027347
LinkDB
Position
3:73043059..73101596
AA seq 500 aa
MCTMEVETSTNRPEEPEILPEGMTKSLKSVSSTKNKDPTPCYEEEKETCLKYFDQWKENE
QLEFVQNLIMRMCHYQHGQINSYLKPMLQRDFISALPKKGLDHIAEKILSYLDAKSMCSA
ELVCKEWKRVISDGMLWKKLIEHRVRTDNLWKGLSDRRGWGQYLFKPKPGETPPGDSFFR
KLYPRIIQNIESIENNWRCGQHALYRIQCHSENSKGVYCLQYDDTKIVSGLRDNTIKIWD
RQSLQCLQVLTGHTGSVLCLQYDDKVIITGSSDSTVRVWDVNTGQMLNTLIHHCEAVLHL
RFNNGLMVTCSKDRSIAVWDMRSPTDINLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK
VWNTGTCEFVRTLNGHRRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV
RCIRFDNKRIVSGAYDGKIKVWDLQAALDPRSPSGTLCLRTLVEHTGRVFRLQFDEFQIV
SSSHDDTLLIWDFLNAPVTE
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgtgtacaatggaggttgaaaccagtactaatcgtcccgaggaacccgaaattcttccc
gaaggaatgactaaatctttaaagtcggtttcgtcgaccaagaacaaagatcccacccca
tgctatgaggaagagaaggaaacgtgtctcaagtattttgaccaatggaaggagaatgaa
cagctagaatttgtacaaaatctgatcatgcgcatgtgtcattaccagcatggccaaatc
aactcttacctgaagccaatgttacaaagggacttcatctcagcactgccaaaaaaaggt
ttagatcatatagcagagaagatcctgtcctaccttgatgctaagtctatgtgttcagct
gagctggtgtgtaaagaatggaagagagtcatttcagatgggatgttatggaagaaacta
atagaacatagagtaagaacagacaatctgtggaaaggtctgtcagacagaagaggatgg
ggtcagtatctattcaaacctaagcctggggagactccacctggcgattctttcttcaga
aaactctacccacgaattatacaaaatatagagagcatagagaataactggcggtgtggt
caacatgctttgtaccgaattcaatgtcatagtgaaaactccaagggtgtctactgtcta
cagtatgatgacacgaaaatagttagcgggcttcgtgataatacaatcaagatttgggat
agacaatcactacaatgcctgcaagtattaacgggccacacagggtctgtgctgtgttta
caatatgacgataaagtcatcatcacaggttctagtgattccacagtcagagtctgggat
gtaaacacaggtcaaatgctaaatacccttatacatcactgcgaggctgtactgcatctt
agattcaacaacggacttatggtcacatgctccaaggaccggtcaatagcagtatgggac
atgagatcccctacagatattaacctgcgaagagtattggttggtcatcgggctgccgtc
aatgtggtagacttcgatgataagtacatagtctctgcatctggagatagaaccattaag
gtgtggaacacaggaacctgtgaatttgtacggacgctaaatggtcatcggcgagggatt
gcatgcctgcagtatagagacaggctagttgtcagtggttcatctgataacacaattagg
ttatgggacatcgaatgtggggcttgtttgagagtattggaaggccatgaagaattggta
cgctgcatccgctttgataacaaacgtattgtcagcggtgcttacgatggtaaaatcaaa
gtatgggatttgcaagctgcacttgatccacgatcaccttcggggactctctgtctcaga
acactagtggaacacaccgggcgggtcttcagactacaatttgacgagttccagatagtt
agcagttcccacgacgacacgctccttatttgggattttcttaacgctcccgtcactgaa
tga

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