Amphiura filiformis: 140149216
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Entry
140149216 CDS
T10871
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
afil Amphiura filiformis
Pathway
afil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140149216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140149216
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140149216
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
140149216
NCBI-ProteinID:
XP_072027536
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Position
3:complement(79563276..79592721)
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AA seq
1183 aa
AA seq
DB search
MDVQNGDVGKSTESKEDDEDSDDDVGRKAATRKPRAASSKAARIQQKRKKRKMTLDSEGE
SSEDDFKPGSDESDDAASSGVDEDEISESCSESDPETPVKNRKRKRPAAAKNNNNDSNKS
VRKVLQPSPTNDDDVPTTPVVKKAFTPSVSSNTKSRLAAFSAVESSPVPSAPTDPEQARF
PHQRLEWLQDGKRKDRKGRPQDHPEYDCHTLYVPKSFLDKCTPASRQWWEMKSQYFDSVL
FFKMGKFYELYHMDAEIAVKELGLIFMKGEVAHSGFPEIAYGRYSDTLIQKGYKVGRIEQ
TETPDMMQDRVRKMGRSSTKFDKVVKREMCRISTKGTRTYSFIDGDTCEAQSSYLLAIAE
RPCTDGLHGDSIYGVCFVDTSIGKFHLGQFQDDRHCSRFRTLIAHYTPAQVLYEKGKILA
KTQQILNNSLLSVIKESLASGSEFWDAGKTLKTLAESRYFEDEDGETSDENRGQWPDVIK
GMISEMDSLGLTAKDGCELAISALGACTWYLKKCCLEQELLSMCNFEAYTPIDSILGAEV
KPTVAEFTSGRQHMVLDGVTLFNLDVLENSSSGTLEGTLLERLDQCSTPFGKRLFKQWLC
APLCNPKSINDRLDAIEDLLGVPDKMSEVTEILKSLPDLERLLSKIHTLGSARRSKDHPD
SRAIFFEDTTYSKRKIVDFITALDGFKSAMLITDQLKDAAPQFKSKLLRQSTSLAKEDDK
SSNGMFPDLREPLRFFKRAFNHDKARQMGAIIPSLGVIPEYDKALISMNAINSQLDRFLE
KQRQRLGCRRINYWGTAKNRYQLEIPEDALKNKSLDDYEVQSSKKGFKRFWTAEIKEYLA
DMISAEERRDAALKDSMRRVFHAFDEYYKEWDEAIQCLSVLDVLLNLAQYSQCGEGDMCR
PQIITPTAGAKPLIAIQNGRHPCIARTFAGGDFIPNDTYVGTAEEDSDSEHNSDGSCVLV
TGPNMGGKSTLMRQVGLIVVMAQLGCYVPAEMCKLTPVDRVFTRLGARDNILSGESTFYV
ELSETSSILQHATQHSLVLMDELGRGTATYDGTAIASAVVKELSETIQCRTLFSTHYHSL
VEEFSHDNNVRLGHMACMVENENEEDPSQETITFLYKFVGGACPKSYGFNAARLADIPDD
VIVVARKKARQFEESADRLKMFKMLHRMTKDTAIEQLRKTLKL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcaaaatggtgatgttggtaaatcaaccgagagcaaagaagatgatgaggac
agtgatgatgatgttggaagaaaagctgcgacacgaaaacctcgtgcagcatctagcaaa
gcagctaggatacagcaaaaacggaaaaagaggaaaatgacgctagactcggaaggagaa
agctcagaagatgacttcaaaccagggagtgatgaatctgatgatgctgcaagtagtgga
gtggatgaagatgaaatatcagaatcctgctcagaatcagaccctgaaacacctgtcaag
aaccgtaagcgcaaacgacctgcagctgctaagaacaataacaatgattccaacaagtct
gtgcgtaaggttctacaacctagtcctaccaatgatgatgatgttccaaccacgcctgta
gtgaagaaagcattcacgccatctgttagctccaatactaaatccagacttgctgctttc
tcagcagttgagtccagtccagttccaagtgctcctacagatccggaacaagccagattt
ccccatcagaggctggaatggttgcaagatggcaaacgaaaagacagaaaaggtcgtcca
caagatcacccagagtatgattgtcatacgctgtatgttcccaagtcattcctggataaa
tgtactcctgcaagtagacaatggtgggaaatgaagtcacaatattttgattcagttcta
ttcttcaagatgggcaagttctatgagttgtaccacatggatgcagaaattgctgttaag
gagctgggtctcatctttatgaaaggggaagttgcacattctggtttcccagaaatcgcc
tatggtcgctatagcgatacattgatccagaaaggttacaaggttggcagaatagagcag
acagaaaccccagatatgatgcaagatagagtcaggaaaatgggaagaagctcaactaaa
tttgacaaagttgtgaagagagaaatgtgtcgcatatcaaccaaaggtacaaggacatac
agttttattgatggtgatacctgtgaagcacaaagcagttatctattagccatagcagag
agaccttgtacagatggcttacatggggatagtatatatggtgtgtgctttgtagataca
tccattggcaagtttcatctaggacaattccaagatgaccgccattgttccagattccgt
acactgatagctcactacacaccagcacaggtattgtatgagaaaggcaaaatacttgcc
aaaacccagcagattctcaataacagtctactctcagtcatcaaagagtctcttgcatcg
ggatcagagttctgggatgcaggcaagactctcaagactcttgcagaaagcagatacttt
gaggatgaggatggagagacatcagatgagaacagaggacaatggccagatgttatcaaa
ggaatgatctcagaaatggattcccttggtttgacagctaaagatggatgtgagttggct
attagtgctctaggtgcatgcacatggtatttaaagaaatgctgtttggaacaagaactg
ctatccatgtgtaactttgaggcctacacaccaattgactcgatacttggcgctgaagtg
aagccaactgttgctgaatttacatcaggaagacaacatatggtcctcgatggagtaaca
ttattcaacttggatgtccttgaaaatagctcatcaggaactctagagggcactctacta
gagcgactagatcagtgtagtacgccatttggtaaacggctgtttaagcaatggctttgt
gcccctctgtgtaatccaaagtcaatcaatgacagattggatgctattgaagatttgctg
ggtgtgcccgacaaaatgtcagaggtcacagaaatcttgaaatccttgccagacctggaa
agattgctgagcaaaattcacacacttggttcagccagacgaagtaaggatcatccagat
agcagagccatattctttgaagacaccacatacagcaagaggaagatagtggatttcatc
acagctttggatggattcaagagtgctatgcttataacagaccaactcaaagatgcagcc
ccacaattcaaatccaagcttcttcgtcaatcaaccagcctcgcaaaggaggatgataag
tcatcaaatggcatgtttcctgacctccgtgaaccactcagattcttcaaaagagcgttc
aaccatgacaaagctcgccagatgggagccattattccaagtctaggagtcatccctgaa
tatgacaaagctctgattagtatgaatgcaatcaattctcagctggataggtttctggaa
aaacaacgtcagcgattaggatgccggcggatcaactactggggaacagccaagaatcga
taccaattggagattccagaggacgctcttaaaaacaaatccctggatgactatgaagtg
caatcatccaagaaaggcttcaagcgattctggacggcagagatcaaagagtatctggca
gacatgattagtgctgaggaaaggcgagatgcagctctcaaagactccatgaggagggtg
ttccatgcatttgatgagtactacaaagaatgggatgaagctatccagtgcttatctgtt
ctagatgtactactcaatctagctcaatacagtcaatgtggagaaggagatatgtgtagg
ccacagatcattacaccaacagcaggtgccaaacctttgattgccattcaaaatggccgc
catccatgtattgctagaacatttgcaggaggtgatttcattccaaatgacacctatgta
ggaactgctgaggaagacagtgatagtgaacataacagcgatggttcatgcgtgctagta
acaggtcccaatatgggtggtaaatctaccttgatgagacaagtaggtctcatcgttgtc
atggcacagcttggttgctatgtaccagctgagatgtgtaaactaacacctgttgataga
gtattcacaaggctgggtgcaagggataacatactctcaggagagagtacattttatgtg
gagctgagtgagacatccagtatccttcaacatgcaactcaacattctctggtactcatg
gatgaactaggaagaggtacagccacctatgatggcacagccatagccagtgccgttgtc
aaggagctatctgagaccatccagtgtagaaccttgttctcaactcactatcattcacta
gtggaggagtttagccatgataacaatgtcagactgggtcacatggcctgtatggtagag
aatgagaatgaagaagacccaagccaggagactattacattcctctataagtttgtagga
ggagcatgtcctaagagctatggcttcaatgctgccagactagctgatataccagatgat
gtgattgtggttgcaaggaagaaggcacgtcagtttgaagagagtgctgatagactcaag
atgtttaagatgcttcacaggatgaccaaagatactgcaatagagcaactgagaaagaca
ctgaaattgtaa
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