Amphiura filiformis: 140149308
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Entry
140149308 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
afil Amphiura filiformis
Pathway
afil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140149308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140149308
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
140149308
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
HECT type E3
140149308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
RCC1_2
zf-UBR
Motif
Other DBs
NCBI-GeneID:
140149308
NCBI-ProteinID:
XP_072027675
LinkDB
All DBs
Position
3:86190217..86243018
Genome browser
AA seq
3082 aa
AA seq
DB search
MTSVHFVVHPLPGTEDQLNDRLRELAEKLNKQPPTSASGVSALKNLIVKSVAVGPNHAAF
LLEDGKVCRLPFSINPDKIESGKPEPRDKSCKGKGSTSYRSVLRGNHNPWVIGDGSSAAV
SGKWASGSRAAAGRSYPGSSSSSRNRGRVMRAQSRGRGGVIVGSRPVVPAAVVPEELVSQ
AQMVLQGKSRAVIIRELQRTNLDVNLAVNNLLSRDDDDGDDQEEGESYMSGGDDLMSLLD
GGIHSDHPSVIIDADAMFSEDFLGIPQRARSRAAGSSRDRDRDSSERNPLLRARDSRWLD
NALRDAGQSGSSSYKPGAGEGSSAESRKSGSSNQGLSQNPLTIGEDVEWWCEKGGEPPKF
IKIAAMYSELLAIGVNGQIYQWKWNEAEPYKHAENTSLHHPKAFSLGLVGEKIVDLSACY
EKATLVAESGKIATMVDDTLAAIANRLEHPAMFFPEFHGDKITSVHSCPLYTCAWMESGS
LFWWGVLPLTVRKRVLEKARERARAKKREVNSGSITAGSQVCLRSCPMYHNGALAFTIKG
SQPKVGQLMDAAWNLTDTCRFRIKQNSQERGGVEAKIPEEVIKVEAKFEVKGDMGPPPSP
ASTSSGEVVVVSSPAAHRRGSKRPLSSPVREFDKPDIEVWALTDVVFVEDIRCAPIGRVL
KVDGAYAAVKFPSAAEPASDANVELEPSTLLQDCRLLRKDELQVVRQGQGPKIPDCFQRT
PKKLMLPESAQIMAVSVDFRGVHVVLKVKNDLLYQHFDLSSSRATVESSFPTNTASFLGK
AQDSIKLHNGREDAVMLLQDGNGTMYPLTKNATGGIRDPVWLDLRPARCLDLGTYYLNHI
SLSSNLKNKVAVIVMALEAQALMPHILRCDYEAVSHFLSNLELETSLVIKEQKLSGVLGE
RCDGNRNIFHACISMCCPTSNSELPAAPSSESSGVGSLSSESLSSRAQIFRNALHTLSNA
IAGAAMASSGSSSAARSMSLREMMGRAASAARAARAASSGLSAEELRDTSPPPVPSAIPT
LSWPPEIGIYGEQDDENNSLNSAGATAGSTSSIASNASSMASVPLVPVVLTPEERKSNAH
SILRLLCEAPALAPHLGELLSARDAQGDTPFMAAVTGRAYPGALTLFDTITQLAAGQRPV
ESQATGESTFARAEFDDKLFKRTIYPPGSEPDASPLYVLCFNDTCSFTWTGTEHTKQDIF
ECRTCGLTGALCCCTECAKVCHKGHDCKLKHTAPHAYCDCWEKCECKALIAGANTARMEL
LDRLIHETDLVKVPNSRGEHILLFLVQTVARQTNEQRHVGQSRNRLSRKNTDAGESEIPD
HNLEPPRFCRHALNCMLQDWQAVEAMLKNGDNKSECPGGPNVTHTPMGEDEVYLKGQSAT
LRLDWFTHTLVVKCQSSDLDTLLLTLIRRIRNAGSEERKTQAVDVARRFVRSVARVYVVL
GVEMAPGKKWTSEAVLRCKRVFKALIHQSIPELCEIAESLIAPVRMGVARPTQHFLPLNS
HTDAIQGSEELFFTEPLPVRSASSTSHRGATGTSRNMSSMRSSRQHHHSRRIVEEEEEHE
VVVADGEEMDIVVGDVMEVQHEMRSQEQGDQNDNQGNQENREDHQDDEVANESDMDLDLL
AESDSDSESNHSNQDQDNTSPDPENVSGRRSAITAGTAGSDAGGGSVAVFFSEDESSSNA
DDAEEEEEESENEIEEEDDSEAPAFVGNVLERPGTSRGSSGTRNTTQPITHPMHWAFRNQ
QPTTQPTRTAESSATIAASASTGGGLIYIDPSNLRRTTITASASNMPPHSTTTNTTNEHA
HSTTASRLARSHGIVVRQIADLLAMLPNYSGLSSLSESLDVTPEDITSLQTLAEGSLRST
WDWLVCIMNSTEAQLRYGKALASITDPAHPTHPMHTQYMRGLRGAAREAATREEASFLRS
IENRRQEAHGSSDEHNAMMDFLNYALSLMRSHNQEHSGWLPVLDVAALKHVAYVLDAVIY
YLRSIDPDSKPDGDHGKDSLWTVGQDYDCDDNTEDDATEASNAADGDSVNEDDTQSTGGR
NWHPFFVRSDSTTFLGCLPPDPVSTPLVDALPLAEKPHLLQPSASREQLFGTPQQPVASS
YESSSSHSTSVNVDTQYLEVLPTQMSLSIRRPGQFADASEEMEQDEGDATEGAAPANTVA
TMTSNEGSSGPSGVSFASMSTVPAEQTLESGSSQAPAGSQLAEGDSLIGESSGASTSTTQ
SSSVISQQLNTDPQLSAPIAEPEPMDISAAPGPSVIQDSSGSSNDAPITQPSSGGDADSN
ASAESRELLTAIATISAKEVSVIRTTGSVERSSLLGERAGLDLSQGSASAEALAGTSAGQ
ERGEPAPLEGGSLADSDTLPIPLVSRQSEERDREGEGEGSAMNTDGATRSSAEKAGQIGE
GKRRASATKNAPPRRPREGGLLGPVISADSLLGRWRLCLELFGRVFLEDVGAEPGSVLSE
LRGFEVKETRFRREMEKLRNSQKNGDISLEVERKREALIVQTLRQLNSIYQRRSSSATTG
NGPPLTVQRVKVTFKDEPGEGSGVARSFYTAIAEAFMSSEKLPDLGEAQINHKGPQYSLI
QRLRSRERERERQRRSHSDAYRPGGSGRMAQSLDRDRNQLSYEARPFYPRDSSPVDDRAP
DYEPLPPSKQALGERLFPRVLALQPSIASKITGMLLELPPARLLLLLSSEETLRERVDEA
VDLILSHGRDENPADSSILDLDIFSLSDRASNSVSSSDRLNSDKNKPTLGGEGSRSMDSE
KDDTEETVAESDTEPLFFQPGKRGFYSPRPGKNTTDRINCFRNVGRILGLCLLQNELCPL
TLNRHVIKTLLGRPVGWHDLAFYDPVLYESLRQLLVDAEKEDAETIFAALELSFCIQLSK
EEGGGQVELTPGGAENRVNPSNVYSYVRTYAEHRMLTVAQKALSAMRDGLHDVLPKGSLE
GLTAEDFRLLLNGCGHVNVQTLIGYTTFNDETGFLCTGGDSHTGEGSEKLTRFKQWFWTI
VEKMTNQQRQDLVYFWTSSPNLPASEEGFQPMPTITVRPPDDNHLPTANTCISRLYIPLY
SSKAILKKKLLLAIKTKAFGFV
NT seq
9249 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtccactttgttgtgcatcctctgccaggcacagaagatcagttaaacgac
agattgagggaattggcagaaaaactaaacaaacaaccaccaaccagtgctagtggtgtt
tcagctttaaaaaacttgatagtgaaatcagttgctgtgggacccaaccatgctgcattc
ctcctggaggatggcaaggtgtgtcgtctacctttctctattaaccccgataagattgag
tccggcaagccagaaccaagagataaaagttgtaaaggcaagggaagcactagctatcga
tctgtattgagaggtaaccacaatccatgggtgataggagatggatcatcagcagctgtg
tctgggaaatgggcatccggtagtcgtgctgcggcagggcgttcatatcctggcagtagc
agttcatctcgcaatcgtggacgtgtgatgcgtgcccaatccagaggtcgtggtggggtc
attgtaggatcacgacctgtagttccagctgctgtagttccggaagaacttgtctctcaa
gctcaaatggtcttacaaggaaagagcagagctgtgattatcagggagctgcaaaggaca
aatcttgatgtaaatttagctgtaaataacttgctgagtcgagatgatgatgacggtgat
gatcaggaggaaggagagagctacatgtcaggtggtgatgatttgatgtcattactagat
ggtggaattcactcagatcacccaagtgtcattattgatgcagacgctatgttctctgaa
gatttcctgggtataccgcaacgtgcacgctctagagctgctggatccagtagagatcgt
gacagggattctagtgagagaaaccctctacttagggcccgtgatagccgatggttagac
aatgctctgagagacgctgggcagtcgggaagtagcagctacaagccaggtgctggagaa
ggttcatccgcagaatcccgtaaatctggatcatccaatcaagggcttagccaaaatcca
ctgaccattggagaagatgtagaatggtggtgtgaaaagggtggtgagcctcctaaattt
atcaagatagcagcaatgtacagtgaattacttgccataggagtcaatggacaaatatac
cagtggaaatggaatgaggcagagccatataaacatgctgagaatacctcactgcatcat
ccaaaagcattttctctcggcctagttggagagaaaatagttgatctgagtgcgtgctat
gagaaggcaactttggtagcagaatcaggaaagattgcaaccatggtggatgacactctt
gctgctattgccaatcgcttggaacacccagcaatgtttttccctgagtttcatggagat
aagatcacatctgtacatagctgtcctctctacacctgtgcttggatggagtcaggcagt
ttgttttggtggggagtacttcctctaactgtcaggaaacgggtactggaaaaagctagg
gaaagagctcgggccaaaaaacgagaggtgaattccggaagcatcacagctgggtcacag
gtttgtttacgtagctgtcccatgtatcataatggagccctggcattcaccattaaagga
tcacaacccaaagttggtcaacttatggatgcagcctggaacctgacagatacatgtcgc
ttcagaatcaaacaaaactcacaggaaagaggaggtgtagaagctaaaattccagaggaa
gtcatcaaagttgaggctaaatttgaggtgaaaggtgacatgggtccacctccgtctcct
gcttctactagcagtggagaggtagtggtagtgtccagccctgctgcacataggcgtgga
agtaagcgccctctatcatcacctgtaagggaatttgataagccagacatagaggtgtgg
gcattgactgatgttgtgtttgtagaggatatacgctgtgcaccaattggaagagttcta
aaggttgatggtgcttatgcagcggtgaagttcccttctgcagcagaaccagccagtgat
gccaatgtggaattagaaccttccacattactgcaggattgcaggctattacgcaaggat
gaattgcaggttgtaagacaaggccaaggaccaaagataccagactgcttccaacgtaca
cccaagaaactcatgctacctgagagtgctcagattatggctgtgtcagtggatttcaga
ggtgtacatgttgtattaaaggtgaagaatgacttgttgtatcagcactttgacttgagt
agcagtcgtgctactgtggaaagttcattcccaactaatactgcatcattcttaggtaaa
gcacaggacagtataaagctgcataatggcagggaggatgctgtaatgctacttcaagat
ggcaatggtaccatgtatcccctgaccaagaatgctacaggtggtatccgtgacccagta
tggctagacctacgtccagctagatgtctagatctaggcacttattatctcaatcatata
tcactgagtagtaatctcaagaacaaggtagctgttattgttatggcactggaggctcaa
gccttgatgccacatatactacgatgtgattatgaagctgtctctcatttccttagcaac
ttggaacttgaaacaagtttagtgatcaaagagcaaaagttatcaggtgtacttggtgaa
agatgtgatggtaataggaacatattccatgcttgtatatcaatgtgttgtcctacatcc
aactcagaactacctgctgctccatctagtgaatcctctggtgtaggcagtttatcatca
gagtcattaagcagtagagctcagatattccgtaatgctctgcatacattaagcaatgct
atagcaggtgcagccatggctagcagtggaagcagtagtgcagctagaagtatgagtctg
cgtgagatgatgggtagagcagccagcgctgcgcgtgcagctagagcagccagcagtggt
ctatcagcagaagagttacgtgatacatcaccacctcctgtaccaagtgctatacctaca
ttaagttggcctcctgaaattggaatatatggtgagcaagatgatgaaaataacagtttg
aatagtgctggtgccaccgcaggttcaacaagctccatagccagcaatgcatcctctatg
gcctcagtaccattggtgcctgttgtactcacaccagaggaaaggaagagtaatgcacat
agtatactaagactattgtgtgaggctcctgctctagcaccacatctaggagaactgctg
tctgcaagggatgcccaaggtgatactccatttatggctgcagtaacaggtcgtgcctat
cctggtgcactcaccttatttgacactattactcagctagcagcagggcagagaccagta
gaatcacaggctacaggagagtctacatttgccagagcagagtttgatgacaagctattc
aagagaaccatctatccacctggtagtgagcctgatgcatcaccactctatgtgttatgt
tttaatgacacatgtagcttcacatggactggtacagaacacaccaaacaggatatattt
gaatgccgtacctgtggactgactggagctctatgctgctgtacagaatgtgccaaagtc
tgtcacaagggacatgattgcaaattgaagcatactgcaccacatgcatactgtgactgt
tgggagaagtgtgaatgtaaagccctcatagctggagccaatactgcacgtatggagctc
ttggatagactcattcatgagacagacttggtcaaagttcctaatagtcgtggtgagcac
atactgttgttcctagtacagacagtggccagacaaacaaatgaacagcgccatgtagga
cagtctcgtaacagactatcgcgaaaaaacaccgatgcaggtgaatccgagatacctgat
cataatctggaaccacctcgattctgtcgacatgcactcaactgtatgctgcaagactgg
caagcagtggaagccatgttgaaaaatggtgataataaaagtgaatgtcctggtggacct
aatgtaacccacacaccaatgggagaggatgaagtctatctcaaaggacaatcagctact
ctcaggttggattggttcacacatacactggttgtcaagtgtcaaagttctgacctagat
accctcctgttaactctgattcgacgtataagaaatgctggtagtgaagagagaaagacc
caagccgttgatgttgcccgtcgttttgtcagatctgttgcccgtgtttatgttgtgctg
ggagtagagatggcacctggcaagaaatggacttctgaggcagttttacgatgcaagcgt
gtgttcaaagctttgatacaccaatccattcctgagttgtgtgagatagcggaatccttg
attgccccagtacgtatgggtgtagccagaccaactcaacacttcttgccactcaacagt
catactgatgccatacagggaagcgaagaactcttctttactgagccccttccagtgcgg
tcagcatcaagtacatcacatagaggagctaccggtacttctcgtaacatgagttctatg
agatctagtcgtcagcatcatcatagtcgtcgtattgtagaggaggaagaggaacatgag
gtggtggtagctgatggggaggagatggatattgttgttggggatgtgatggaagtgcaa
catgaaatgcgtagtcaagaacaaggagatcagaatgacaaccaaggcaaccaggagaat
agagaagaccatcaggatgatgaagttgccaatgagagtgacatggacttggatcttctt
gctgagagtgatagtgacagtgagagtaatcatagcaaccaggaccaagacaacactagt
ccagatccagagaatgttagtggaagacgtagtgccatcacagctggtactgctggctct
gatgctggaggtggatctgttgctgttttcttctcagaagatgagtcgtcctccaatgct
gatgatgcagaagaagaggaagaagaaagtgagaatgagatagaggaagaagatgactcc
gaggcacctgcatttgttggtaatgtcttagaacgacctggaaccagtagaggctcgtca
ggtactcgcaatactacccagcctatcacacatccaatgcactgggcattccgtaatcag
cagcctacgacacagcctacacgtactgctgaaagctctgctaccatcgcagcatcagct
tctacaggaggtggtcttatctacattgatccatccaatctgaggcgtacaaccatcaca
gcatcggccagtaatatgccaccgcatagcaccaccaccaatacaacaaatgagcatgct
cattccaccactgcaagtaggctagcaagatcacatggtattgtagtacgacagattgct
gacctactagctatgttacccaattatagtggcttgtcttctttatcagagagtctagat
gttaccccagaagatatcacaagcctacaaacattggcagagggcagtctgcgatcaact
tgggactggttggtttgcatcatgaatagcacagaggctcagttaagatatggtaaagca
ttagcctctatcacagacccagcccatccaactcatcccatgcatacacaatacatgcgt
ggactaagaggagctgcacgggaggctgctacaagagaagaggcatctttcttacgtagt
attgagaatcgccgtcaagaggcacatggtagtagtgatgaacacaatgccatgatggat
ttccttaattatgctttgtcattgatgcgatctcataaccaagagcactcgggatggtta
cctgtcttggatgttgctgcactcaagcatgttgcatacgtgttagatgctgttatttac
tacttgcgtagcattgatccagatagcaaacctgacggtgatcatggtaaagactcgttg
tggactgttggtcaagattatgattgtgatgataacactgaagatgatgcaacagaagct
agtaatgctgctgatggtgatagtgttaatgaagacgatacacagtcaactggaggccgc
aattggcatccattttttgtgcgctcagattcaacaacattccttgggtgtcttcctcct
gatccagtcagcacacctctagtagatgctcttcctcttgctgagaaaccgcatctatta
cagccgagtgcatctcgtgaacaattatttggtactcctcagcagcctgttgcttcttca
tatgagtccagcagttcacatagtacatctgttaatgtggacacccagtatttagaagtg
ttaccaactcagatgagcttatcaataagacgtcctggtcagtttgctgatgccagtgaa
gagatggaacaggatgaaggtgatgcaacagaaggtgctgctcctgctaatacagtagca
acaatgacttctaatgaaggctcaagtggcccatcaggagtaagttttgctagtatgtct
accgtcccagctgaacaaaccctggagagtggtagcagtcaagcacctgctggatcacag
ctagctgaaggcgattcattaataggagaatcatcaggtgctagcacctcaactacacag
tcatcatctgtcatcagtcaacagctaaacacagatcctcagctaagtgcacctatagca
gaaccagaacctatggacatttcagcagcaccaggaccaagtgttatacaagatagcagt
ggtagtagtaacgatgctccaataacgcagccctcatccggcggtgatgctgatagcaat
gctagtgctgaatcacgagaactgttaactgctatagcaactatttctgctaaagaagtc
agtgtgatacggactacagggtctgttgaacgctcctctttattaggggagagagctggt
ctagacttatcacaaggaagtgccagtgcagaggcattagcaggcaccagtgcagggcaa
gagaggggtgagcccgcaccattagaaggtggttcattagctgacagtgataccctgcct
ataccacttgtatcaaggcagtctgaagaacgggatagagagggggaaggagaagggtca
gctatgaatacagatggtgctacaagatcatctgctgagaaagctggacagattggggaa
ggcaagaggagggcaagtgccacaaagaatgcaccaccaagaagaccaagagaaggtgga
ttacttggacctgtgatctcagctgattccttactaggtcgttggcgcctctgtcttgag
ctctttggtagagtgttccttgaagatgtaggtgcagaaccagggtctgttctcagtgag
ctacgtgggtttgaagtcaaggaaactcggtttagaagagagatggaaaagttaaggaac
agccagaaaaatggagatatctctctagaggtcgagagaaagcgtgaggcactgattgta
caaactttaagacaactcaattccatctaccagcgacgcagcagcagcgccaccacaggc
aacggtccaccactaacagtgcaaagagtcaaagttacttttaaggatgaacctggggaa
ggcagtggtgtagcaagaagtttctatactgcaatagctgaagcatttatgtcatcagag
aaattaccagacctaggagaagcccagatcaaccataaaggaccacagtatagtctcatt
caaaggctgcgaagtcgagagcgtgaaagagaacgtcagcgtcgcagtcattccgacgca
tacaggcctggtgggagtggtcgcatggcacaaagtcttgatagagatcgtaatcagctg
tcctatgaagccagaccattttatcctagagatagtagcccagttgatgatagagcacca
gattatgaacccttaccaccgtccaaacaagcactaggagagaggctattcccaagggtt
ctcgctttacagccgtctattgcaagcaagataactggcatgctattagaactaccacca
gctcgtctcctgctactattatcaagtgaagaaactctcagggaacgagtggacgaagct
gtagatctcatcttatcccatggaagggatgagaatcctgctgacagcagcatcctggac
ctggatatatttagtttatcagacagagcatctaatagtgtatctagcagtgatagatta
aatagtgacaagaataaacctacacttggtggtgaagggtcacgtagtatggattctgag
aaagatgacacagaggagacagttgcagagagtgatactgaaccactattcttccagcct
ggaaagagagggttctattcacctagacctggaaaaaatactacagatagaatcaattgt
ttccgaaatgtcggaagaatacttggattatgtctactacaaaatgagctttgtccgttg
actcttaatagacatgtcatcaagacgttactaggaagaccggttggatggcatgattta
gccttttatgatcccgtcctttacgagagtctccgtcaacttcttgtggatgcagagaaa
gaagatgcagagacgatatttgcagcattagagctgagtttttgcatacaactaagtaaa
gaagaaggtggtggtcaggtggaattgacgccaggtggagctgagaacagggtgaatcct
agcaatgtatattcctatgtgaggacgtatgctgaacatagaatgctaacagttgcacag
aaagcactttctgctatgagggatggtctgcacgatgtacttcctaaaggatctctagaa
ggattgacagcagaagacttcagattactactcaatggctgtggtcatgtcaatgtacaa
acattaataggttatactacattcaatgatgaaactggttttctttgcacaggtggtgat
agtcacactggtgaaggtagtgagaaattgacacgattcaagcagtggttctggaccata
gtggaaaagatgaccaaccagcagcgccaagatctggtttatttctggacatctagtcct
aatcttccagccagtgaagaaggattccaacccatgccaaccattacagtgagaccacca
gatgataatcatctaccaacagctaacacctgtatatcacgattatatataccactatat
agctccaaagccatacttaaaaagaaactattactagctattaagaccaaagcttttggt
tttgtttaa
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integrated database retrieval system
