Amphiura filiformis: 140150258
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Entry
140150258 CDS
T10871
Name
(RefSeq) integrin beta-1-A-like
KO
K05719
integrin beta 1
Organism
afil Amphiura filiformis
Pathway
afil04145
Phagosome
afil04512
ECM-receptor interaction
afil04820
Cytoskeleton in muscle cells
afil05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
140150258
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140150258
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140150258
09142 Cell motility
04820 Cytoskeleton in muscle cells
140150258
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140150258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140150258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afil04147
]
140150258
04515 Cell adhesion molecules [BR:
afil04515
]
140150258
04090 CD molecules [BR:
afil04090
]
140150258
Membrane trafficking [BR:
afil04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
140150258
Exosome [BR:
afil04147
]
Exosomal proteins
Proteins found in most exosomes
140150258
Cell adhesion molecules [BR:
afil04515
]
Integrins
Integrin beta subunits
140150258
CD molecules [BR:
afil04090
]
Proteins
140150258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
140150258
NCBI-ProteinID:
XP_072028362
LinkDB
All DBs
Position
4:52934232..53058095
Genome browser
AA seq
828 aa
AA seq
DB search
MALPIYSNTMRITTWRIQHSLVICLIFIASSVVRTQDPDFEIVPNSALCSEASTCSECMV
IHPSCAWCMHPDFNKNDNYDRFDTMEILRLRCFFLCDLEIVPNTKSIIDDKPLSEKGTTE
NIVQVKPQKVTIKTRPGQAVPLPQLTIRQAEDFPVDLYYIMDLSQSMADDLNNLKDLGDK
LAAVMGNITTNFKLGYGAFVDKLVMPYADILPSYLVNPCFGKYCDPPFGFKNVLGLTEET
SKFADAIARVNASGNLDSPEGGLDALMQATVCKEKIGWRDHARHLLLYSTDAPFHIAGDG
LLGGIVARNDGQCHVDNTNTYTMATELDYPSISQLSVQMKKHSILPIFAIGTADGVAIDS
PGDPYRFYKDLPYFFHESYVTRLSSNSDDIVEVVKAVYLNITAGVKVEDNAPRDAFTLNY
TAICLDGVPQTGVQECNGLQLGDDVFFNITLTMNKTVCASSKRKHTFNIGPTAFNEFMEV
TVEAICECDCGEPQRGPQICNGTGEEICGGCQCDDGWSGSNCDCDKSDTGEVDMGCVWNV
TGDNPIDDPIECNNRGVCNCGECNCNKAEPGKRYYGTHCQCDDFSCPRHDKQICGGPKRG
VCMCNESTGINYCNCTEDYIGERCECPKSTDGCRSPDGTICNSGAGVCECGKCVCNDTSK
YRGSTCFECKDCPGACEEHKPCVQCKAFNSGEYAGEPECDECPYNITIVEELSRRTGFQE
CIFRDDDDCLYVFTHERLPNGTYIIEVDDDKVCPDKSAILWMIIGIIVGILLVGLVLLLI
WRLLTYIHDRREFNNFEKERENARWEAGENPIYKPSTSVFKNPTYGKN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcattacctatctatagtaacacaatgagaataacaacatggagaatacaacacagt
ctagtcatatgtcttatatttattgcatcttcagtagtcagaacacaagatccagatttt
gaaatagtacctaattcagcattatgttcagaagctagtacctgtagtgagtgtatggtt
atacatccatcatgtgcctggtgtatgcacccagacttcaataaaaatgataactatgac
cggtttgatactatggagattttacgtctacgttgtttttttttatgtgatttagagata
gttccaaatactaaatcaattattgatgataaacccttgagtgaaaagggaacaacagag
aacatagtccaagtaaaaccacaaaaagtgaccattaaaacaagaccaggtcaagctgtt
cctttaccacagttaaccattagacaagcagaggattttcctgtagatttgtactacata
atggatctctcacagtctatggctgatgatttaaataatctcaaagatctaggagataaa
ttagcggctgttatgggtaatattaccaccaattttaaacttggttatggagccttcgta
gacaaacttgtcatgccttatgcagatatattgccttcatatttagttaacccatgtttc
gggaaatactgcgacccgccatttggattcaagaatgttcttggactcacagaagagaca
agtaaatttgcagatgccattgctcgtgtaaatgcatctggtaacttagatagcccagag
ggcggtcttgatgctctaatgcaagcaactgtatgcaaggaaaaaattggttggagagac
catgccaggcatctactcttgtactccactgatgcaccgtttcacattgctggagatggc
ttgctgggtggtattgttgcaagaaatgatggtcaatgtcatgttgacaataccaatact
tataccatggcaacagaactggactatccatccatcagtcagttgagtgttcagatgaag
aagcacagtatcctaccaatatttgccattggtacagctgatggagttgctatagattca
cctggagatccatacaggttttataaggatctcccgtatttcttccatgaatcctatgta
actagattatcatctaactcagatgatattgtggaagttgtcaaagctgtgtatctaaac
atcacagcgggagtgaaggttgaagacaacgcccctcgtgatgcattcaccctcaactac
acagccatctgtctagatggagtaccacaaacaggtgtacaggagtgcaatgggttacag
ttaggagatgatgtcttctttaatatcaccttgactatgaataagacagtgtgtgccagc
tcaaagaggaaacatacattcaacataggtcccacagcatttaatgagttcatggaggtg
actgtggaggctatctgtgaatgtgattgtggtgagccgcaacggggtcctcaaatctgt
aatggaactggtgaggagatctgtggtggatgccagtgtgatgatggatggtctggatcc
aactgtgattgtgataaatctgataccggtgaagttgacatgggatgtgtatggaatgtg
acaggagacaaccctatagatgaccctattgaatgcaataataggggtgtatgtaactgt
ggtgaatgtaattgtaataaagcggaacctggcaagagatactatggcacacactgtcag
tgtgatgatttctcatgtccaaggcatgacaagcaaatatgtggcggtccaaagcgtggt
gtatgtatgtgcaatgagagtacagggataaactattgtaactgtacagaagactacata
ggggagagatgtgaatgtcctaagagtacagatggatgcaggtctcctgatgggactata
tgtaacagtggtgctggtgtttgtgaatgcggtaaatgtgtatgcaatgatacgtccaaa
tacaggggttctacatgctttgaatgcaaggattgtcctggtgcatgtgaagaacataaa
ccctgtgtacaatgtaaagcctttaactcaggggaatatgctggagaaccagagtgcgat
gaatgcccatataatatcaccattgttgaagagttatccaggagaactgggttccaggag
tgtatattcagggatgacgatgactgtctatatgtgttcacacatgagaggttacctaat
ggcacttacataatagaggttgatgatgataaagtgtgtccggataaatcagctatatta
tggatgataataggcataatagtaggcatcctgcttgttggtcttgtattgctcctgata
tggcgtctacttacctacatccacgatagaagggaattcaacaattttgagaaagaaagg
gaaaacgcaagatgggaagctggcgagaatcctatctacaagccgtcaacttctgtcttc
aaaaacccaacttatggaaaaaattaa
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