Amphiura filiformis: 140150277
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Entry
140150277 CDS
T10871
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
afil Amphiura filiformis
Pathway
afil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
140150277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140150277
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
140150277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
HTH_32
HTH_23
HTH_38
Sigma70_r4_2
HTH_29
GerE
HTH_24
HTH_11
HTH_12
HTH_28
XRCC4
HTH_DeoR
PAX
HTH_5
Motif
Other DBs
NCBI-GeneID:
140150277
NCBI-ProteinID:
XP_072028385
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All DBs
Position
1:complement(61238628..61253482)
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AA seq
460 aa
AA seq
DB search
MGKRGELLSAQKECILVLHQEGLSNRRIATHLSISESCVRYNLKKLKENGTMVNKTRSGR
PKAMTSEQESALIARSKEDPTKPATQLKLDLEETFGHVASISVIKKCLSEWKTEMADLLE
WRRHWKPDLKAAKWAPCRYKEKTLLVKSHFADETYQIMVYDGLRMWQEQCDKEQFQQRTK
TLNPNIEAPLGTLLHHLQDSVSEENMSHSISKLTQKEDAVTIHMATQLEGALPFTWQFHL
KEALHEESAEHLTTPLMSMVAELLRRQKELFRILKRKDAEIDDYKASGAKVSRKHLETTP
FDDKIFINNMNESKEFGVLVDPNQSTSAFQESGQDLYRQIKMRDAFNNAQLIQEDSDEEY
EDDFSGVGDAPTAPSGPSWRKRLPPSLVEAAQTGTNQSPDRVSPKKSPRMSSPGSSTQDT
EMMRRQALEKKLAEEQTKLKAKKKKRSFFESKQEDIFESS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagaggtgaactgttgtctgcacagaaggaatgtatattagttcttcaccaa
gaaggcttgtctaatagacgcattgcaacccatctaagcataagtgaatcttgtgtcaga
tacaatcttaaaaagctcaaagagaatggtaccatggtgaacaaaacaagaagtggaagg
ccaaaggcaatgacatcagaacaggaaagtgcattgatagcccgcagtaaggaagatcct
accaagccagccactcaattaaaacttgatttggaggaaacctttggccatgttgccagc
atttctgttatcaagaagtgcctatctgaatggaaaactgaaatggcagatcttctagag
tggcgtcggcattggaagcctgatttgaaagcagctaagtgggcaccatgcagatacaaa
gagaagacacttctggtgaagagtcattttgctgatgaaacctaccagattatggtgtat
gatggactgaggatgtggcaggaacagtgtgataaggaacaatttcaacaaagaaccaag
actttgaatcccaatattgaggcacctttaggaacattattacatcatctacaagatagt
gtgtctgaagaaaacatgtcacattccataagtaaattgacacaaaaagaagatgctgtt
actattcatatggctacacagttagaaggagcactaccatttacctggcaattccatctc
aaggaggcattacatgaagagagtgctgagcacctgactacaccattaatgagcatggtt
gctgagctgttaagaagacagaaagaattgttcagaattcttaagaggaaagatgcagag
atagatgactacaaagcatcaggtgccaaggtctcaagaaaacacttagaaacaactccc
tttgatgacaagattttcataaataatatgaatgaatccaaggagtttggggtattagtt
gatccaaatcaaagcacttcagcattccaggaatcaggtcaagatttatacagacagatt
aagatgagggatgcttttaataatgcacaactaatacaagaagattctgatgaagaatat
gaagatgatttctcaggtgtaggtgatgcacccacagccccatcaggtccttcttggcgt
aaacgtctgcctccatcactagtagaagcagcccaaacaggaaccaaccaatcacctgat
agagtttcaccaaagaaatcaccaagaatgtcatcacctggcagctcaactcaggatact
gaaatgatgagacgtcaagcattagaaaagaaacttgcagaagaacagaccaaacttaaa
gcaaagaagaaaaaaagaagcttttttgaatccaaacaagaagatatttttgaaagtagt
taa
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