Amphiura filiformis: 140150657
Help
Entry
140150657 CDS
T10871
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
afil Amphiura filiformis
Pathway
afil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140150657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140150657
03019 Messenger RNA biogenesis [BR:
afil03019
]
140150657
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140150657
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140150657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf_CCCH_4
zf-CCCH
zf-CCHC_3
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
140150657
NCBI-ProteinID:
XP_072028825
LinkDB
All DBs
Position
4:19700841..19718843
Genome browser
AA seq
300 aa
AA seq
DB search
MQNLVANVENIKFDLEEQLDLQIGAQPLPFPGMDKSCAAVCQFFKYTQCANGAMCPYRHV
RGEKTVVCKHWLRGLCKKGDECEFLHQYDMTKMPECFFFTKFGMCSNKECPFLHIDPMSK
MKDCAWYDRGFCKHGPLCKNRHIRRVMCQNYLNGFCLDGPNCKFQHPKWDLPLQDMKETI
RKITCHNCGESGHKAYQCTNDPQSGNQNVSSSNTSQRPHQSYHGKPIVCHNCHEPGHKAY
ECPATQSAPQQVQVLGAIDTNARSNTADHHRSFRAVDTVTCFKCGNKGHYANKCPTIEPT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatctcgttgcaaatgtagagaatatcaagtttgacttggaggagcagttggac
ctacagattggagcacagccgctgccttttcctggcatggataaatcatgtgcagctgta
tgccagtttttcaagtatacacaatgtgccaacggagccatgtgtccataccgccatgtg
agaggggagaagaccgtagtatgcaagcattggctgagaggactgtgtaagaaaggagat
gaatgtgaattcttacatcaatatgacatgaccaaaatgccggagtgtttcttctttaca
aaatttggaatgtgtagcaacaaagagtgtccattcttacatattgatcccatgagtaaa
atgaaagactgtgcttggtatgatagaggcttctgcaaacatggtccattatgtaagaac
agacatataaggagagtgatgtgtcaaaactatctcaacgggttctgcctggatggacca
aactgtaaattccaacatccaaaatgggacctacctttacaagacatgaaagaaactatc
agaaaaatcacctgtcataactgtggggagtctggacacaaggcctaccagtgcaccaat
gatccgcagtcaggaaaccagaatgtgtcgtcatcaaatacatcacagagacctcatcag
tcatatcatggcaagcccattgtttgtcataactgtcatgagcctggtcataaagcttat
gagtgtcctgctacccagagtgcacctcagcaagttcaagttttaggagctattgatacc
aatgccaggtctaatacagcagatcatcataggtcattccgtgctgtcgacacagtcaca
tgcttcaagtgcggcaacaaaggtcactacgccaacaaatgtcctaccattgagccaacc
taa
DBGET
integrated database retrieval system
