Amphiura filiformis: 140150707
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Entry
140150707 CDS
T10871
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140150707
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
140150707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
GCIP_C
Motif
Other DBs
NCBI-GeneID:
140150707
NCBI-ProteinID:
XP_072028895
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Position
4:22765954..22828558
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AA seq
806 aa
AA seq
DB search
MSAPSTVENILSQFRGRSHNALEKHYTATLQSLQSSSSSPEFVENHLRTLLLCINCTKKK
RKLPEVLLAQIVKALSEKRRLSWRSRILCSNILQDYGPTQDIQVHSLNPPQDLKQLPHIL
PVLLNQGQRLGQLDRLAYQMVRWVSTVGFDSEIQSRALASLVVIGTLHGDVMTAEQIYVL
CSQVSDWLSQASLEQAANPHSKQKTKKMTALVTEIDGALCQDFFTVLNLSQFYGEDHLLN
VHSFSVLRSLLHATLCRDPDSIATSQDRAESPSDSAVSFLLKAQEALIEKACEYCLRVID
QCERTYISKDSWETTGPARSQDLDLVYACLIEAISTLDVLCSIDSGLVPKLFPSIKRVCT
RITEEGASQPRVMLSLLQFFINHSNSVVHDPQLSYHQFFGPLLGSYYDNQCVAMDTIIFC
RDNLEHLCENSTMERYFPNLLKILAWNPISFLAEFIHILPSMISSSSAVEMLHTILDLPC
MTAALVANYRAMRLMNDPVYADTISPAHLKSIEGIRNPDHKPLFTYICRNQSGQGDTISK
LNFLHSLLHEMESHPRVMTCAESVPILLKLYFNTILEYGDQALVCQLIPVILERAGLLYQ
IPAFQKDVRKVLSEELVSIFKQCPSLIIEERLEILDYVSALRHITGNEDFFLHVVWVVGE
YTSTSYDKRCSTDTIIKFYEALETLLYEISVLVQSTPNGKDLYSVRLMTVMMTALAKLAS
RCQDLIPRVLLCLTKIAQQQTKTSSDDKHKKVLLDRANELINLLKLPDIASAILGPPPDI
NSGRWHTDNITSIPILLQAASKIVPH
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgcccagtactgttgaaaatatattgagtcaattcagaggaagatcccataat
gcattggagaagcactacacagcaactctacagtccttgcaatcatcctcatcttcacca
gagtttgttgagaatcacctgcggacattactgctgtgtatcaattgcacaaagaaaaaa
agaaagctaccagaagtcttactagctcagatagtgaaagccttgtcagagaagagacgt
ttaagctggagatcccgtatcctgtgtagtaacatactacaggactatggaccaactcaa
gatattcaagtacacagcttaaatccacctcaagacttgaagcaattgccacatatctta
ccagtgttacttaaccagggccaaaggttgggtcaattagacagactagcctatcagatg
gtaagatgggtgtcaactgtaggctttgatagtgagatccaaagcagggcattggcgagc
cttgttgtcataggaacgctccatggagatgtgatgacggcagaacaaatctatgtgcta
tgctcgcaagtgagcgattggctatcacaggctagtttggagcaagctgcaaatccacac
tctaaacagaaaacaaagaagatgacagcactggtgacagagatagatggtgccctgtgc
caggatttttttacggttctcaacctcagtcaattctatggtgaggatcacctgctgaat
gtgcacagcttttctgtgctacgcagtctcttacacgcaactctatgtagagatcctgat
agcatcgccacatctcaggatagggctgagtcaccttcagacagcgcagtgagtttccta
ctcaaagcccaagaagccttgatagagaaagcatgtgaatactgccttagggttatagac
cagtgtgaaagaacttatataagcaaagactcctgggaaacaacagggccagctcgaagc
caagacctggacttagtttatgcttgtttaattgaagccatctcaacattagatgtccta
tgtagcattgattcaggtttggtgcctaaactgtttccatccatcaagagagtatgtaca
cgcatcacagaagagggcgctagtcaacctagagttatgctcagtttacttcaattcttt
atcaatcacagtaattcagtggtccatgacccccaactatcctatcatcaattctttggt
cctctacttggcagttactatgacaaccagtgcgttgctatggatacgattatcttttgt
cgtgataacttggaacacctgtgtgaaaattctaccatggaaagatacttccctaatttg
ttgaagatcctggcttggaaccccatcagtttcttggcagaatttattcatattttgcca
tccatgatctcatcatctagtgctgttgagatgcttcacacaatcttagaccttccttgt
atgacagcggccctggtagccaactatcgtgctatgcgtctgatgaatgaccctgtgtat
gccgatactatctcgccagctcatttgaaatccattgaagggattcgcaacccagaccac
aagcctctatttacgtacatatgtagaaaccagtcgggacaaggagacacaataagcaag
ttgaattttctccactccttgctccatgaaatggagagtcatcctagagtcatgacctgt
gcagaatcggtacctatattactcaaactatatttcaacaccatccttgaatatggagac
caagcgttagtttgtcaactcattcctgtgattctagagagggcaggcttgctatatcag
ataccagcatttcaaaaagatgtacgcaaggttctctcagaagaacttgtgtctatattt
aagcagtgtccatcacttatcatagaagaaagactagaaatactggattatgttagtgcc
ttgagacatatcactggaaatgaagacttcttcttacatgttgtatgggtggttggagaa
tacacctccactagctatgacaagagatgcagcacagataccatcatcaagttctacgag
gccctggagacactactgtatgagatatctgtcttagtacagtcaacaccaaatgggaag
gacttatactcagtgagacttatgactgtcatgatgacagcattggccaagcttgcatca
cgttgtcaggatttgataccccgtgtcctgctctgtctgaccaaaatagcccagcaacaa
accaagacatccagcgatgataaacacaagaaggttttgctagatagagccaatgaactg
atcaatctactcaaactacctgacattgcctcagctattctaggcccaccacctgacata
aacagtggacgctggcacacagataacatcacatctatacccatcttactacaagctgct
agcaaaattgtaccacactga
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