Amphiura filiformis: 140150825
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Entry
140150825 CDS
T10871
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140150825
Membrane trafficking [BR:
afil04131
]
Protein recycling
Others
EARP complex
140150825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Peptidase_M4_C
Motif
Other DBs
NCBI-GeneID:
140150825
NCBI-ProteinID:
XP_072029064
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All DBs
Position
4:33517745..33579003
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AA seq
973 aa
AA seq
DB search
MKRIKTLITRQGSGSREDRSPTEETATTPESMKSIEHTLKEEREFPNDPMKDAEVLESIE
KVYFGDETFDSNLHELNKLPELDQLDLNKVGQDRDLLRRQLNSVSKKVSDLVLENHSAYS
KELHRVTNLQASLQTANIICSNGRRQLEMAKQGFTVASLSILANHKKRLQLLSLLKSLHT
IKTLQRTDIRLREMMEEENYPEAIQLCLECQKAASTFRHYRCISELSSKLQDTMEMIEEQ
LDQALAKTCSNFDIEHYEKVQTAYQLLGKTQTAMDQLHMHYTSAIHNTAFTIVVGYVELV
SGSQDTNFQKMHYRDLCTHITTDTYIPCLVDLCKALWEVMKSYHKIIEWHETNDEPISPT
LQESDVASDLGNVEAQLNKKYIKQKLTHGLTRIWQDVQQKVKLYLLGTDLSSFKYDDFIY
VLDLVNRLITVGEEFCGSKSEGLHDSIRQQSLNYFKNYHRARIEELQMFLENEGWELCPV
RANFTALNLHEFRYLRQAGISQPGKGAPASPSPKRDHCTRSGYFTKYGAQGSPFDREMDD
EEGEDVIATNGYEDEERDSQGNESDDSDVPDELKQEYIDEHTEDQQHARSSLKRRKSDRT
HFRGPVAILSNTTLNILRLFGKYMQMVAVLKPIAFDVVICMSQLFDYYLYAVYTFFSTDL
STDKHHPSYLRIGQSDALGLSLSNKIRTTLQRINDNLINNEPPAGMMPNPMENKEKVGFP
HISPMVNLTGMDKLHGLAERVVGTESLVFLAEQFQSLQSHLEGVIPASKKPFLQQFYSQT
VSVASELRRPVYRGVASRCIDFEKILQLMFTVKWDIKDIMSQHSAYVDVLLQEFQIFSNR
LTDVNRRVPVPTEVYTILWEHIIRLANRTFVEGYASARKCSNEGRALMQLDFQQFLLKLE
TLTEIRPIPDKEYVETYVKAYYLSEADMESWIKEHREYSSKQLTSLINCAINNKKARQRL
LASVEDMERARVR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaataaagacccttatcaccagacagggaagtggctcaagggaggacaggagt
ccaacagaggaaacggccaccacacccgaatctatgaaatcaattgaacacacattgaag
gaggagcgtgaatttcctaatgacccaatgaaagatgcagaggtacttgagagcattgag
aaggtatactttggtgatgagacttttgacagcaatcttcatgaactcaataaactacct
gaattggatcaacttgacttaaacaaggttgggcaagatagagaccttcttagacgtcaa
ctgaattcagtttcaaagaaggtgtcagaccttgttcttgaaaatcactcggcatattca
aaggagttgcatagagtaaccaatcttcaagcatcactacaaacagctaacattatatgc
agcaatggcagaaggcaattggagatggccaaacaaggtttcactgttgctagtttaagt
attttagctaatcataagaaaagattacaactgttaagtcttctgaagagtctacatacc
attaaaacattgcaaagaactgacatcagattgagagagatgatggaggaggagaactac
cctgaggcaattcagttgtgtctagagtgtcaaaaagctgctagtacattcagacattac
agatgtatcagtgagttgagttccaagttacaagatacgatggagatgatagaggagcag
ttggaccaagcattagccaagacatgtagtaactttgatattgaacactatgaaaaggtg
cagacagcttaccagctgttggggaaaacacagactgccatggaccaattacacatgcat
tataccagtgctatacacaacacagcatttactatagtagttggttatgtggagcttgtc
agtggctcacaggatacaaacttccagaagatgcactatagagatttatgtacacatatc
acaacagatacctacattccatgtctagttgatttgtgcaaagcattatgggaagtgatg
aagagctatcataaaatcattgaatggcatgagacaaatgatgaaccaatcagccccaca
ttgcaggaatcagatgttgcaagtgatttagggaatgttgaagctcaattaaacaaaaaa
tacatcaagcagaaattaacacacggtctgacaaggatatggcaggatgtgcaacagaaa
gtgaagctttatttattagggacagacttgtctagtttcaagtatgatgatttcatctat
gtcttggatcttgtcaataggttaatcacagttggagaggaattttgcggaagcaaatct
gaaggtttacatgactccatccgacaacagagtctcaactatttcaaaaattatcacagg
gcaagaatagaggagttacagatgttccttgagaacgaaggatgggaactctgtccggtg
agagccaacttcacagctcttaacctccacgagttccgctatctacgacaggcaggaatc
agccaacctggcaaaggggcacccgcttctccatcacccaaacgtgaccactgcacaaga
tcagggtacttcaccaagtatggggctcaagggagcccatttgatagggaaatggatgat
gaggaaggagaggatgttatagcaactaatgggtatgaagatgaagagcgtgattctcaa
gggaatgaatctgatgacagcgatgtacctgatgagctgaaacaagaatatatagatgaa
cacactgaagaccaacagcatgcaaggagctcgctgaagagacggaaatcagatagaact
cacttcaggggaccagtggcaattttatcaaacacaactctaaatatactcagattattt
ggtaaatacatgcagatggtggcagtgctgaagcctatagcatttgatgtagtcatatgt
atgtcacaactctttgattattacttgtatgccgtctacacattcttctccacagacttg
agtactgataaacaccatccctcctatttacgcatcgggcagagtgacgcactgggatta
agccttagcaacaagatccgcaccactctacaaaggattaacgataatctgatcaacaat
gagccaccagctggaatgatgcctaatcctatggagaataaggagaaagttggttttcct
cacatctctcctatggtgaatttgactggcatggacaaactacatggactggcagagagg
gtcgtgggtacagagtcattagtgttcttagctgaacaattccagtctctacagtctcat
ttagagggtgtcataccagcatccaagaaaccattcctacaacagttctattcacagacg
gtgagtgtagccagtgaattacgcaggcctgtgtatcgtggcgtggcttcacgttgcata
gattttgagaagattctacagctgatgtttacggtgaaatgggacatcaaagacattatg
tctcagcatagtgcatatgtagatgttcttctacaggaattccagatttttagtaatcgt
cttacagatgtcaacagacgtgttccagtccccactgaggtgtacactatcctatgggag
cacatcattaggctggctaataggacatttgttgaagggtatgccagtgcaaggaaatgc
agcaatgaaggaagagctttgatgcagttagattttcaacagttcctccttaaacttgag
acactcacagaaataaggcccattccagacaaagaatatgtagagacatatgtgaaggct
tactacctctcagaagctgatatggaatcatggattaaagagcatagggagtattcatcc
aaacaactcaccagtcttatcaactgtgccatcaacaacaagaaagcaaggcagaggtta
ttagctagtgtggaggatatggagagagcaagagtcaggtag
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