KEGG   Amphiura filiformis: 140151096
Entry
140151096         CDS       T10871                                 
Name
(RefSeq) PMS1 protein homolog 1-like
  KO
K10864  DNA mismatch repair protein PMS1
Organism
afil  Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:afil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afil03400]
    140151096
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     140151096
SSDB
Motif
Pfam: DNA_mis_repair HMG_box HATPase_c_3 HATPase_c HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 140151096
NCBI-ProteinID: XP_072029412
LinkDB
Position
4:complement(56465309..56486690)
AA seq 1101 aa
MFYVCRCVILTIYLILFLFLQQYTMSSLKQLSGETVRLITSSQVITSVYSVVKELVENSL
DANADNIDVKLENFGFDKIEVRDNGDGITTENALYMAQKHYTSKISDHGDLEALATYGFR
GEALGSLCAVSNVSIVTKTKEDAVSNLYTLDHHGMIASTKPSHMGNGTTVTATNLFKNIP
VRRQYYSNTKRCREELKKVEDLLMSYGAIRHDIRVSLSHNKKPVWQKNKTSSQRNALLNT
WGGSVMKQMTHTQKTDPATQVTIEAYLPKLDSDHQLTSRSVADRCWISVNKRPVTLKEIE
KTVKQYYSGTTKQDTSSLRHLVMYVDITMPTHLVDVNLEPNKTRVLLQNSDAILSLLTDM
LQDLYGPLHGKQSTDKVESISSTETRADNTEREDLDRSSESVDNEPHVDQQKNDQRTQPE
HHSLQFKLVLEGHNEDKKDFCLGENNSKEDGSIFELPSHNTSVSRSDVGLTDSEAVSGQQ
ASDHAQTDTGDASTNDFTDLKSCELIPSTQPEFNLMDSSLDIFCDTATETNEPIIGRTDD
DVTNQPAVRNAFYSSNQTNISESKESSVTGDMTSIDWSKGVGLKNSLGCPIQPSVLLVPG
KGLREKQNIVSSTTNFSSITGNHIGNVSNSSSNQKAENQLVANDNSVRNSSTNHNLAEEL
STHLTSENKLQSNISSDKDVVTSQTTEIELCTAMFEQEAADGGPDQTKSPGRTRRPLEEM
SGQTTLYDIIESTAVKRPVEAFAFFSRQFRAAIVKENPNLDFAAVNSVLEKKWEELSEDV
KREYQKKGQRDIMRYHEQVKNVKQTNCDRPGVLQLPPKKKKKLEKLANQNLIDEMLSSQG
CKLSKKKKNKSAKAAAVKEVTVRFSVLGLGEDQKKCTEDRFGVENKWRLIGQISSNNLWL
AVKEHQLLILNQYRIEEALLYTRLMATHILPVECCEIPVLLNKSMLGGDENWVSLLSLQS
IVTPPDPDRYFVDERLKSNGFHIKQTTDPETSDVRIQLIAMATCIPYYGIHDLKEILDLI
TQGGNSLAKCRALKTSNYLQGEAMRMARNLSADLTEEEIYEIISRMEKYLLPRQQECLHG
KPFIEVLYDMNQNDLDSLEVT
NT seq 3306 nt   +upstreamnt  +downstreamnt
atgttttatgtgtgtagatgtgtcattctgacaatttatttaattttgtttctatttctt
cagcaatacacaatgtcttctctgaagcaattatcgggagaaactgtcaggcttattacc
agttcacaggtaataacctctgtctacagtgttgtaaaagaattggtggaaaattcactg
gatgctaatgctgataacattgatgtcaaactggaaaactttggctttgacaaaattgaa
gtacgagacaacggtgacggcatcacaacagaaaatgcactctacatggcgcagaagcat
tacacatccaagatcagtgatcatggtgacctagaggcgttagcaacatacggtttccgt
ggtgaagctctagggtcattgtgtgctgtgtccaatgtttccatagtgacaaagacaaaa
gaagatgcagttagtaatttgtacaccctggatcatcatgggatgatagcaagcacaaaa
ccatctcatatgggcaatggtacaactgtgactgccaccaatctcttcaagaacattcca
gttcgcagacagtactatagcaacacgaaacgatgtcgtgaagagctgaagaaagttgaa
gatctgctgatgtcctacggcgccatcagacatgacatcagagtatccttgagtcataat
aagaaaccagtttggcagaagaacaagacatcaagtcagaggaatgccttattgaataca
tggggtggaagtgttatgaaacagatgacacatactcagaaaacagatccagcaacacag
gtcaccatagaggcttacctgcctaagttggattctgaccatcaactgaccagtcgttct
gtagctgaccgctgctggataagtgttaacaaaaggcctgtcacattgaaagaaattgaa
aagacagtgaagcagtactactctggtacaactaagcaggataccagttcactccgccat
cttgtcatgtatgtggatatcaccatgccaacacatcttgttgatgtcaacttggaaccc
aataaaacgagagtgctgctgcaaaactcggatgccattctgtcattattgactgatatg
ttgcaagatctatatggacccctgcatggcaagcaaagcacagacaaagttgaatccatc
tcatcaacagaaacaagagctgataacacagaacgagaagatctcgacaggagttcagag
tctgttgataatgaaccacatgttgatcagcagaaaaatgatcaaagaacacaaccagaa
catcattcacttcagttcaaacttgtattagagggccataatgaagataagaaagacttt
tgtcttggagaaaataactcaaaagaagatggatccatatttgagctaccaagtcataac
acttcagtttcaagaagtgatgtgggattaactgattcagaagcagtctcaggacaacaa
gcttctgatcatgcacaaactgatactggagatgctagtaccaacgattttaccgatttg
aaaagttgtgagttgattccatctactcagccggaattcaatttgatggattcaagtctt
gatattttttgtgacactgccactgaaacaaatgaacctatcattggtaggactgatgac
gatgtgaccaatcagccagccgttagaaatgcgttttatagttcaaatcagacaaatata
agcgagtccaaagaatcaagtgtcaccggtgatatgaccagcatagactggagtaaagga
gttggtcttaaaaatagccttggttgtccaattcaaccatcggtccttctggttcccgga
aaaggccttagagaaaaacaaaacattgtatcaagcacaaccaatttcagtagtattaca
ggtaaccacataggtaatgtcagcaactcatcatccaatcagaaggcagaaaatcaactt
gtagccaatgacaattcagtaagaaattcatcaaccaatcacaacttagcagaagaactt
tcaactcatctaacttcagagaacaaattgcaatctaatatctcctcagataaagatgtt
gtaactagtcagactacagaaatagagctatgcactgctatgtttgagcaggaagctgct
gatggagggccagatcagaccaagagtccagggaggacaagaagaccattggaagaaatg
agtgggcagacaactctatatgatatcattgagtctacagcagtcaaaagaccagtagaa
gcatttgcattcttctcaagacaatttagagctgcaattgtgaaggaaaaccctaatctt
gattttgctgctgtgaattcggtgttagagaagaaatgggaggagttatcagaagatgtg
aagagagaataccagaagaaaggacagagagacataatgagataccatgaacaagtaaag
aatgtgaaacagactaactgtgatcgacctggagttttacaattgcctccaaagaaaaag
aagaagctggaaaagctggccaaccagaatttaatagatgagatgttatcctcacaaggg
tgtaaattatccaagaaaaagaagaataagtcagccaaagcagcagcagtcaaagaggtg
acagtgagattcagtgtacttggattaggagaagaccagaaaaaatgcacagaagacagg
tttggtgttgaaaacaagtggaggttaattggtcaaatatcatccaataatctatggctt
gcagtgaaagaacatcagttattgattttaaatcagtacaggatagaagaggccctgtta
tatactcgccttatggctacccacatactgccagtagaatgctgtgaaattcctgtcttg
ctgaataaaagtatgttaggtggcgatgagaactgggtgtcattgttgagtctacagagt
atagtcacaccccctgatccagacaggtattttgttgatgaacggctcaaatctaatgga
ttccacatcaaacaaaccacagatccagaaactagcgatgtgaggatacagttgattgcc
atggcaacttgtataccatattatgggatacatgacttgaaagaaatcttggacttgata
acacagggcggcaatagtcttgctaaatgtcgagctcttaaaacatccaactacctccag
ggtgaagcaatgcgaatggcaagaaacctgtctgccgatttaacagaagaggagatttat
gagattatatcacgtatggagaagtatttgctaccaagacaacaggagtgtttacatggg
aaaccatttattgaagttttatatgatatgaaccaaaatgatttggattcgttggaggta
acatga

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