Amphiura filiformis: 140151168
Help
Entry
140151168 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
afil Amphiura filiformis
Pathway
afil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140151168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140151168
Enzymes [BR:
afil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140151168
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
140151168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
140151168
NCBI-ProteinID:
XP_072029490
LinkDB
All DBs
Position
4:61694304..61746208
Genome browser
AA seq
1139 aa
AA seq
DB search
MAAPSLRNLTRADYQKPAQNQHVPLQDLVKPHVESFNYVLREGLQLAVASIPPVAFQVAS
GDKISLQFTDADIGVPKVPVGNVYANNLQVYPSECRQRGTSYQAKLTVHIQWSTSNGQSG
MVERQIGQVPIMVKSNNCNLHNLSPSQLIAHKEDAEEMGGYFIVNGIERIIRMLIMPRRN
FPMAINRPKWKTRGKAYTEFGVTMRCVSKDQSSMNLTMHYLNNGTATLSFAYQKEIFFIP
LILILKALIDTTDQHIYKELLKGRENNTFYIGCVIGMLRQTQDKNLVSQKAILQYIGERF
AVKLGLPSWYTPEENAQFLFKHSICIHLDSNLDKFNALILMARKLFAFVRGECAAENADS
PMNQEVLLAGHLYQMVLKEKMEQWMTNLRYTVEKKAKTKPRHFELTDDILLKACHNVSDI
SRAMEYLLATGNVVSKTGLGLMQATGMTIVADKLNFMRFMSHFRCVHRGSFFAEMRTTSV
RKLLPEAWGFLCPVHTPDGAPCGLLNHLTALCQVINTQQPTSQMVPLLCSLGMVPQDGPD
LNANTQSYEVALDGRVLGYVGQDQATQLVEKLRTLKVKGLHGVPPTLEIVLVPITGKASQ
YPGLYLFSTPARLMRPVQHLATDSVELIGTFEQVYLNVAVIPSEAHEGLTTHLELNEGSL
LSAVASLTPYSDFNQSPRNMYQCQMGKQTMGFPSHTLRYRNDHKMYRIQTPQSPLVRPYA
HDHYNIDEYPLGTNAVVAVISYTGYDMEDAMVINRASLDRGFAHGTIHKTEEIDLKKKAN
DQGSTLLVFGCDPSSPQVNDKLDSDGFPYVATVLQPGDPLYGFTNVETGQVRIEKYKGTE
VAVVDHVKVIGNDLGNQECQRAFIQLRIERNPIIGDKFSSRHGQKGVCSQRWPVENMPFS
ESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSGCLHGLCHDATPFTFSEKQPAIEYFGKL
LSAAGYNHYGTERMYSGVTGVELEADIFIGVVYYQRLRHMVSDKFQVRSTGPIDVLTHQP
VKGRKRAGGIRFGEMERDSLLAHGTSFLLQDRLFNCSDKSLTRVCAKCGSMLGIHLEQLQ
GGGLHMNDNDGTGLGSARKWLCTVCNSPDNVSLVAVPYVFQYLVAELAAMSIKVTLDIK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcccagtttgcggaatctcacacgtgctgattaccaaaaacctgctcaaaac
caacatgtgccattgcaagatctggtgaaacctcacgttgaatccttcaattatgttttg
agagaggggcttcagctagctgtagcaagtattccaccagtagcattccaggtagcaagt
ggagacaaaatttcgctgcagttcacggatgctgatattggtgtgccaaaagtaccagtt
ggaaatgtatatgccaacaatctgcaggtttatccatcggagtgtcgacagagaggtact
agctaccaagctaagcttacagtccacattcaatggagtacaagcaatggacagagtggt
atggtagaaagacagattggccaagtgcctattatggtcaagtccaacaactgtaacttg
cacaatctgtcaccaagccagctgatagctcacaaagaggacgcggaggagatgggcgga
tatttcatcgtaaatggaatcgagagaatcattcgcatgctgatcatgccaagaagaaat
tttcccatggcaatcaacaggcccaagtggaagactcgaggtaaagcttatacagagttt
ggtgttactatgaggtgtgtcagcaaagaccagtcatccatgaatttaacaatgcattac
ctcaataatggcacagcaacactgagttttgcctaccagaaagaaatcttcttcattccg
ctcattctcattttgaaggctcttatagacaccacagaccagcacatatataaagagttg
ctgaaggggagagaaaataacacattttatataggatgtgtgattggcatgttgcgtcag
acacaagacaagaatctggtttcccagaaggccattctgcaatacattggggagagattt
gctgtcaagctaggcctaccatcctggtacacgcccgaggagaatgcacagttcctattc
aaacacagcatttgtatacatttggattccaacctggacaagtttaatgcacttatattg
atggctagaaagctatttgcctttgttaggggagagtgtgcggcagagaatgctgacagc
cctatgaatcaagaagttttacttgctggtcatctctatcaaatggtgctcaaggaaaag
atggaacagtggatgactaatttaagatacacagtagagaagaaagccaagacaaagcct
agacattttgaactaactgatgatatcttgttgaaggcgtgtcataatgtgagtgatata
tcaagagctatggaatatcttcttgctactggcaatgtggtatccaagacaggcctggga
ctaatgcaggctactggtatgacaattgtagccgacaaactcaactttatgcgattcatg
tcacatttccgctgcgtccacagaggatctttctttgcagaaatgaggaccacctcggtc
cgaaaactcttgcctgaggcatgggggttcctctgcccagtgcatactccggatggtgca
ccatgtggtcttcttaaccatcttactgcactgtgtcaggtaataaatacccagcaacca
accagtcaaatggtgccactgctatgtagcttaggcatggtaccccaagacggtcctgac
ctgaatgccaacacacagtcctacgaagtagcactggatggcagagttctaggctatgtt
ggccaggaccaggcaacacaattggtggagaagttgagaaccttgaaggttaaagggcta
catggggtgcctcccacactagagatagtcctagtcccgatcacaggtaaagctagccag
tacccagggttatacttattcagtactccagcgagactcatgagacctgtacagcacctg
gccaccgacagcgttgaactcatcgggacatttgagcaagtctatctgaatgttgctgtg
ataccatctgaggctcacgaagggttgacaacacacctggagctgaacgaaggcagtcta
ttgagtgctgtagccagtttgacaccatactcagatttcaaccaaagtcctaggaatatg
taccagtgtcagatgggcaagcagacaatgggctttccatcacatactctgcgatatcga
aatgatcacaagatgtatcgtatccagacaccacagagtccgttagtcagaccctatgca
catgatcattacaacatagatgaatatcctcttggtaccaatgcagtagttgctgtcatt
tcttacacaggctatgatatggaggatgcaatggttatcaacagggcatcactagataga
gggttcgcacatgggaccatccacaagaccgaagagattgacttaaagaagaaagctaat
gatcaaggatcaactttacttgtgtttggttgcgacccatctagtccgcaagtaaacgat
aaactggactctgatggtttcccgtatgttgctactgttttacaaccgggagatcctctc
tatgggtttactaatgtagaaactggtcaagtcagaatagagaagtacaaggggaccgaa
gttgctgttgtggaccatgtgaaagtcattgggaatgatctgggtaaccaagaatgtcaa
cgagctttcatacagcttagaatagagagaaacccaataataggggacaaattttctagt
cgacatggacagaagggtgtgtgcagtcagcgttggcctgtggaaaacatgccgttttca
gagagtggaatgactcctgatattatattcaatcctcatggctttccatctcgtatgaca
ataggtatgatgatcgagagtatggctgggaaatcaggatgtctccatggtctatgccat
gatgctacaccattcacattctcagagaaacaacctgccattgaatactttggaaaatta
ctatcagcagctggttacaaccattatggaacagagagaatgtacagtggagtaactggt
gttgaacttgaggctgacatatttattggtgttgtctattaccaaagactaaggcacatg
gtgtcggataaattccaggtcaggtcaacaggtcctatcgatgttctgacacatcaaccg
gtaaaaggcaggaagcgtgctggtggtatccgttttggagagatggaaagagattcccta
ctagcccatggtacatcatttctactccaggataggttgttcaactgttcagacaagagc
ttgacacgtgtgtgtgctaaatgtggcagtatgctcggtattcatctagaacaactacaa
ggcggtggtcttcacatgaatgacaatgatggaactggactaggctctgccagaaaatgg
ctctgcacagtatgtaactctccggacaatgtcagtcttgtagcagtaccgtatgtcttc
cagtatttagtggccgagttggctgctatgagcatcaaagtgacacttgatataaagtga
DBGET
integrated database retrieval system
