Amphiura filiformis: 140151283
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Entry
140151283 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP42-like
KO
K14321
nucleoporin-like protein 2
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140151283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140151283
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140151283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
140151283
NCBI-ProteinID:
XP_072029666
LinkDB
All DBs
Position
4:complement(68439442..68450295)
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AA seq
471 aa
AA seq
DB search
MVVCKFYLQGSCKFGDRCRNEHPRSVNDYNRSNNQNYGYSNNFNRGGGQSGYNTGYNRGY
TDQRGGYNNHGAQQQQRQDQFHWRSGQQQSGRDQGGKTVSFQNSFGGNNNNRFSALDPGG
GDGGGAAKSDSQLNPNEIVDIIKKDIEEWENGKMWPLSCYKPTRSQHCVPGFEDITQDEL
RYTAYSAEKQQKFDQYKAAVASLMSTVQQQKDQLKSPTSDLSSRLVDIFKGIYQAGSNVS
LGNGDSMIQGLVTASGASNTQATAAGSTQQGTSFGTGTPAATPPAASTSSSFGTTSGFGS
SSFGNAQAATNTSGFGAGSSTASGFGTGNPSGFGSSGFGNNERLFGKGAATQSSTQPPSG
LFGKGHHLLVQHLQLQDYLVKAPTAQVGTGLFGKGAANAPVGLFGKPVAPGAGGGGGIFA
QSSGVVDSSVYTPLSELTAEXKEQFEADTFTIGKIPTRPPPVELVNQARTA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaattctatttgcaaggaagctgcaagtttggagaccggtgtcgcaat
gaacatccaagaagtgtaaacgactacaaccggtcaaataaccagaactatggttattcc
aacaatttcaaccgaggtggtggtcaatctggatataacacgggttacaatagaggttac
acagaccaacgagggggatacaataatcatggtgcacagcagcagcagcgacaagaccag
ttccactggcgcagtggacaacagcaatctggacgcgatcaaggagggaagactgtcagc
tttcagaactcgtttggaggcaataataataatcgtttcagtgcattagatcctggaggt
ggggatggcggtggtgctgcaaagagtgatagccaattgaatccaaatgaaattgttgac
atcatcaagaaggacatagaggaatgggagaatgggaaaatgtggcctttatcctgctat
aaacctactagatcacaacactgtgttccaggctttgaagacataactcaggatgagctt
cggtatacagcatatagtgcagagaaacaacaaaaatttgatcaatataaagctgcagtt
gcttctctgatgtcaactgtacagcaacaaaaagaccagttgaagagtccaacttcagat
ctaagttcaagattggttgatatttttaaaggaatctaccaggctgggtctaacgtgtca
ttaggcaatggtgatagtatgattcaaggtttggtaactgcaagtggtgccagcaacaca
caggcgacagcagcaggaagcacacaacaaggcacatcgtttggaactggtactccggct
gccacccctccagcagcttctacatcaagtagctttggcaccaccagtggattcggaagc
tcaagttttggcaatgcccaagcagcaacaaacacttctggatttggggcaggatcatca
acagctagtgggtttggaactggcaacccaagtggatttggatcatctggatttggaaat
aacgaacgactatttggcaaaggtgcagctacacagagtagtacacagccaccatcgggt
ctgtttggtaaggggcaccacctactagtgcagcacctgcagctacaggactatttggta
aaggcaccaactgcacaagttggcacaggactatttggtaaaggtgcagcaaatgcacca
gttggattgtttgggaaaccagttgcacccggtgcaggaggaggaggagggatatttgca
caaagtagtggtgttgtggacagcagtgtatatacaccactgagtgaactaactgcagaa
ngaaaagaacaatttgaagcagatacttttacaattggcaaaattccaacaaggcctcca
cctgtagaacttgtgaatcaagcaaggacagcctag
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