KEGG   Amphiura filiformis: 140151299
Entry
140151299         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
afil  Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:afil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afil04121]
    140151299
   03400 DNA repair and recombination proteins [BR:afil03400]
    140151299
Enzymes [BR:afil01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140151299
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140151299
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    140151299
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 zf-rbx1 Zf_2nd_IFT121 AAA_34 Prok-RING_4 zf-ANAPC11 zf-RING_6 zf-Nse zf-RING_11 K_channel_TID
Other DBs
NCBI-GeneID: 140151299
NCBI-ProteinID: XP_072029683
LinkDB
Position
4:complement(69298910..69351775)
AA seq 1164 aa
MSWNRWRGGNNYRWKSKQKNNYRWSRGESLGTPTWLPDDVHVHSQSERDSWVDTPSSSQQ
GTAGDAGDDDDAGHVLLGTVRGPAVGLQYYRGEVNNKEMVSLVREPRNPYDTNAVKVENI
WGEQVGHIKRELAAPLAFIVDNKLARLEGMVPTGKGNMYRMPVEISIWGNPDKLKPVSDR
LSRYGYVLKSNLVEEMGPGGSSAPPVYRPQAAKGKSVTLTHAEMQNKLDSLFENLKQEAK
NIELEPAKAIKTKLYPHQKQALHWMCVRENNMELPHFWKEIGGNKYLNTVTNFISQTKPP
SVHGGILADEMGLGKTLEVISLILTNFHGGRPLAEPGTELVRDIDEDEDEEFDTEEEDME
EEDTKDEDEESEKKLSGAAAFMQKDDPDYAPVIKIDIPPAKIVTDVPAPVIEITTSTDSQ
VVDLTLSEEVDGKKEKKVPAAGGVVDLTKEEDMKVEAKPVQVEPVAESSSRRPRRAAKKP
VRYDYSDDSEMEELLMEANVIPKKKAKSSKQRKSKEEEEPYKPQEEEMEKKKKSKGKKSN
KGGKGKKSANAKETAAPALPTLAMPEDSTPVDIPPATSKGKSKKAKAPKAAKTAKAAPPN
PSVTAVPGINATNASGPRPTLIVCPLSVMSNWMDQFEEHVSAYVKLNIYSYYGNERTKDP
QVLSAQDVVLTTYNTLAADYKAKKENSALHKVKWLRVVLDEAHTXRNPAALQTKAVLAIT
TVRKWALTGTPIQNSVKDLWALMAFIKLEPFATDKQWWMRTIARPIGNGDKTALDRLASL
MDAIALRRTKTQKVKGRRMVDLPEKTVVLTKLELKGEERQLYESMAKEGRLTIGKYFRSG
TLLANYGDVLAILLRLRQLCCHPSLVAAAAAAMAAKAEDDGGGAGCGEELKKKLVATLLA
VLSQGTDEECCVCLDSLNSPVITPCAHVFCERCINDVIKTEGEGRTNCPLCRGPVIREQL
VHVPAAAQEANRKQVTDGEWHSSTKVDALMEQLIKVRNEDKSIKSLVVSQFTTLLNLLEK
PLRDSGFKFVRLDGTMSLQKRTKAMEALMSTKPNTPTIMLLSLKAGGLGINLTSASRVYL
MDPAWNPAAEDQCFDRCHRLGQTREVIVTKFVIEDSVEERMLELQEKKRGLMSGAFGKKV
SADERRNARVNDIKVLMDITASQI
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgtcgtggaacaggtggagagggggtaacaattatcgatggaagagcaaacaaaaaaac
aattatcgatggagccgtggtgaaagccttggaactcccacatggttacctgatgatgta
catgtacatagtcaatctgagagagactcgtgggtagatacaccatcttccagccaacaa
ggtacagcaggagatgctggggatgatgacgatgcaggccatgtgctattggggactgtg
agagggcctgcggttggtttacaatactacaggggagaggtgaataacaaagagatggtg
tccttggtgagagagcctcgcaatccatatgataccaatgctgtcaaggtagagaacatc
tggggagaacaagttggtcatatcaagagggagctggcagctccacttgcatttatagta
gacaacaaattagccagattggaaggaatggtgcccacggggaagggcaatatgtatcgt
atgccggtagagatatcaatctgggggaatcctgataaattgaaaccagtgtcggacaga
ctgagtcgctatggatatgtcctcaagtcaaatctggtggaagaaatgggacctggtggc
agttcagcacctcctgtataccgccctcaagctgcaaagggcaaatcagtgacccttacc
catgctgagatgcagaacaagttagattcattgtttgaaaacttgaagcaagaagccaag
aacattgagctagaaccagctaaggctatcaagacaaaactataccctcaccagaagcaa
gccctgcattggatgtgtgtccgtgagaacaacatggaactgcctcatttttggaaggaa
atcggcggcaacaagtacctgaatacggtgacaaatttcatcagccaaacaaaaccgccc
agtgtccatggtggaattttagccgatgagatggggttgggaaaaaccttggaggtcatc
tcactgatcctaacaaattttcatggtggaagaccattggcagaaccaggcacggaactt
gttagagatatagacgaagatgaggatgaagaatttgatacggaagaagaagacatggag
gaggaggataccaaagatgaagatgaagagagtgagaagaagctgagtggtgcagcagca
tttatgcaaaaagatgacccagactatgcacctgtcatcaagattgacataccgcctgca
aagattgtcacagatgtacctgctcctgttatagagataacaacaagcacagacagtcag
gttgttgatttgactctgagtgaagaagtagatggtaaaaaagagaaaaaagtccctgct
gctggtggtgttgtggacttgaccaaggaagaagacatgaaggtggaagcaaagccagtg
caagttgagccggtcgcagaatcaagttctcgtagaccaagaagagctgcaaagaaacca
gtaagatatgactacagtgatgattcagaaatggaagagctcttgatggaagcaaatgtc
attcctaaaaagaaagcaaaatcaagcaaacaaaggaaaagtaaagaggaggaagaacca
tataaaccacaggaggaagagatggagaaaaagaagaaaagtaaaggaaagaaatctaac
aaaggtggaaaaggaaagaagtcagcaaatgcaaaggagactgctgctccagctttacct
acactggctatgcctgaagatagtacacctgttgatatcccacctgcaacatctaaaggt
aaaagcaagaaagccaaagcacctaaggcagccaaaacagccaaagcagctccacctaat
ccaagcgtaactgctgtccctggtatcaatgcaaccaatgcctctggaccaagaccaact
ctaatagtctgcccgctcagtgtaatgagtaattggatggatcaatttgaagagcatgtg
agtgcttatgtgaagctgaatatatacagctattatgggaatgagcgcaccaaggaccct
caggttctatcagcacaagatgtagtccttactacatacaatactctagcagctgactac
aaagctaaaaaggagaatagtgcacttcataaagtaaagtggctccgcgttgtcctagat
gaagctcacaccnatcgcaatccagctgctcttcaaactaaagcagtgttagctataact
actgtaaggaaatgggctcttactggtacacctattcagaacagtgtgaaggatttgtgg
gcattgatggctttcattaagctggaaccatttgctacagataagcagtggtggatgaga
actatagcaaggccaattggcaatggtgataagactgctctggaccgtcttgccagcttg
atggatgcgatagcactacgccggaccaagacacagaaagtcaaaggcagacgaatggta
gacttgccagagaagacggttgttttaaccaaattggagttgaagggagaggagagacaa
ctgtatgaaagtatggcaaaggagggacgattgactattggcaagtatttccgcagcggt
actctgcttgctaactacggtgatgtattagccatcttgcttcgtcttagacaactctgt
tgtcatccttcactagtagctgctgctgcagctgctatggctgctaaggctgaagatgat
ggaggtggtgctggttgcggtgaagaattgaagaagaaattagtggctactctccttgct
gtactaagccaaggaacagatgaggaatgctgtgtgtgtctagactctctaaacagtcct
gtaatcacaccctgtgctcatgtgttctgtgagcgatgcataaatgatgtcatcaaaaca
gaaggggaaggaaggactaattgtcctctttgtcgaggtccagtgatcagagagcagttg
gttcatgtccctgctgcagcacaggaagctaacaggaaacaagtcactgatggagaatgg
cactcaagtactaaggttgatgcattaatggaacaactcatcaaggtcaggaatgaagat
aagagcatcaagagcctggtggtatctcagtttacaacacttctcaatctgctggaaaag
ccactcagagacagtgggtttaagtttgtgcggcttgatggtaccatgtccttacagaaa
agaaccaaggccatggaggcattaatgtccactaaaccaaacactcctaccatcatgctg
ttgtcactcaaagcaggaggattaggcatcaaccttacttcagcttcaagagtgtatctc
atggatccggcatggaatccagcagcagaagatcagtgttttgatcgttgtcatcgcctt
gggcagacaagagaagtgattgtcaccaagtttgtcattgaagactctgtagaggaacga
atgttagagctccaagagaagaaacgcggtctgatgtcgggtgcatttgggaagaaggta
tcagcagacgagcgcaggaatgcaagagtgaatgacatcaaggtgctaatggacattaca
gcctcgcagatataa

DBGET integrated database retrieval system