Amphiura filiformis: 140152103
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Entry
140152103 CDS
T10871
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4-like
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afil03016
]
140152103
Enzymes [BR:
afil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
140152103
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
140152103
Transfer RNA biogenesis [BR:
afil03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
140152103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_6
Kelch_5
Kelch_3
Kelch_1
Motif
Other DBs
NCBI-GeneID:
140152103
NCBI-ProteinID:
XP_072030501
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All DBs
Position
5:27372924..27389165
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AA seq
692 aa
AA seq
DB search
MTDVILMAFSNGRDKSNDAAVQGTNDSSIISKCSMAAQGYFEDNFLKLFVSSPKSRRAPL
INRGYYIRARIIDDVLKTFLTECQGEEKQVISLGAGFDSAFFRLQASGHLDRTKFIEVDF
PQVAERKRALIQANRELLKCLDDNRDEWSAAEEPSADVWLKSERYYLLGTDLCDLNRLQK
SLKQCQVDTSIPTLLLSECVITYMKVKSSNSLIEWCLKTFPNSIFASYEQIQPDDAFGVV
MQNHFKKLNSTIKAIQTYPSLEAQCQRYTSMGWPHCQAVNMNQYYLNALSPEERARIESL
ELFDEYEEWHLKCAHYIVAYASAGRCRDSLSKLFHFQDKPAENVKSHSEPSINGVVKFNK
WCKNCSSPMKCYAHASARTSANNVLICGGFGETTQGKHSRLNSVMLLNLDSGKLNTAQPL
QKSDMIDARLHHTINSISQSQFIIFGGRTSPAKPCASTIILTLENHQQNVYYKLSTLPSR
GNEPTPRWRHSAVLDQCKERLIVYGGCTIDGGVLDDLWWMEVTSGIWHKANTSCDLPKPR
HSHTMSHWKQNKFIIAGGIACDLRPLPCMYVLESDSWECSHLHLTPSLTSTSCRYSHTSH
ICGDNLMLVGGINPLTSTQPPVVIINLIEGTWRQYTIPAADPEHPIMLHNHSSVLISDDK
ILILGGGGNCFSFGTHLNRSPVELTLEQGLPC
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtcatcttaatggctttttcaaatggtagagataaaagcaacgatgctgcc
gttcaagggaccaatgatagcagtatcatcagcaagtgttctatggctgcccagggatac
tttgaagacaatttcctcaagttatttgtctccagtccaaagagtcggagagctccattg
atcaacagaggctactacatcagagctaggatcatagatgatgtattgaagacttttctt
acagaatgtcaaggtgaagaaaaacaggtgatatctctcggtgctgggtttgattcagct
ttcttcaggcttcaggcttcgggacaccttgacagaactaagtttattgaggtagacttc
ccacaggttgctgaaaggaaaagggcattgatccaagctaatagagaattattgaaatgt
ctggatgataacagggatgaatggagtgctgcagaagaaccatcagcagatgtatggttg
aaatcagagagatactacttattaggaactgacctgtgtgacttgaacagattacagaag
agccttaaacaatgtcaagttgatacatctataccaacactattactgtctgaatgtgtc
attacctacatgaaggtcaaaagttctaacagtctcattgaatggtgtttgaagactttt
ccaaattccatttttgcatcttatgaacagattcaaccggatgatgcatttggagttgta
atgcaaaatcatttcaagaagttgaattccacaatcaaagccatccaaacatacccatca
ttggaagctcagtgtcaaagatatacatctatgggctggcctcattgccaagcagtcaac
atgaatcagtattatttgaatgccttatcaccagaggagagagcaagaatagaatcactg
gaattgtttgatgaatatgaggaatggcatctgaagtgtgctcattatatcgtagcatat
gcctcagctggaaggtgtagagacagtttatcaaaactcttccattttcaagataaacca
gctgaaaatgtaaagtcacatagtgaacccagtatcaatggtgtagtcaaatttaacaaa
tggtgcaagaattgcagctctcccatgaaatgttatgcccatgccagtgccagaactagt
gcaaataatgtacttatatgtggaggctttggggaaacaactcaaggaaaacatagcaga
cttaatagtgtcatgttactgaatttggatagtggaaagcttaatacagcacagccatta
caaaaaagtgatatgatagatgcaagacttcatcatacaatcaattccatctcacaatcc
cagtttatcatctttggtggtaggacttccccagccaagccatgtgcctccacaataatc
ctcactctagaaaatcatcaacaaaatgtgtactataaactcagtacactgcccagtaga
ggcaatgagcctactccccggtggcgacacagtgctgtattggatcagtgtaaagaaagg
cttatagtatatgggggatgtacaattgatggaggagtactagatgatctatggtggatg
gaggttacttctggtatttggcacaaggcaaataccagctgcgatcttcctaaacctaga
cattcacacaccatgtcacactggaaacaaaacaagttcatcattgcaggtggtatcgca
tgcgaccttcgacctttaccctgcatgtatgtgttagaatctgattcatgggaatgcagt
catttacatttgacacctagtttaacatcaacaagctgtagatattcacacacatctcat
atatgtggggacaacctgatgcttgtaggtggtatcaatcctcttacctccacacagcca
ccagtagttattatcaatctcatagaaggtacatggaggcaatatacaattccagctgca
gatccagagcatcctattatgcttcacaatcatagcagtgtgttgatatcagatgacaag
attctcatactaggagggggaggcaattgcttctcatttggaacacatcttaacagatca
cctgtagagttaacattagaacaaggccttccatgctag
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