Amphiura filiformis: 140152492
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Entry
140152492 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL-like
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
afil Amphiura filiformis
Pathway
afil03460
Fanconi anemia pathway
afil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140152492
09124 Replication and repair
03460 Fanconi anemia pathway
140152492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140152492
03400 DNA repair and recombination proteins [BR:
afil03400
]
140152492
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140152492
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140152492
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
140152492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_d1
FANCL_C
zf-HC5HC2H
zf-RING-like
SLX1_C
zf-RING_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
140152492
NCBI-ProteinID:
XP_072030924
LinkDB
All DBs
Position
5:3531345..3546532
Genome browser
AA seq
387 aa
AA seq
DB search
MMVMMCAAKELSLGDVFSVCPLVPLDLHQTIWQGFITVHGEDYQLRLELPSTRKLQNARL
FGEWKLNHHLERYKHVIMQRLQSAKDLATFLLELQTLLERTMSKSDVTSTSAQTVSPALY
TKLISEIEDIGWDRLSSIDASFESLQFSAVDGLGKIHYITINLNSQYPDAVPACSVSLPT
PFELQWSSKGKLKDILQQFQVTLEKHKVFWQSMSEIDNQTWVLEPDKPMPSDSIRRIALG
NNSSLQVTVDPLHPGMLPECRFLGADHVVKPLKEKLHSNLHLWDTDCSILTNLQKVLQVE
FPSPSSTQKQELSEECGICYTYRLESAIPDQACDNPQCNKPFHQACLYEFTSTLPSSHQT
MSKYGFNTTYGECPYCNQPITVKKMDT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatgatgtgtgcagctaaggaattgtcacttggtgatgtattttcagtctgc
ccattagttccactagacttacatcaaactatttggcagggatttataaccgttcacggt
gaagattaccagttgagattggaactaccctctaccaggaagctacaaaatgcaaggttg
tttggtgaatggaaattaaatcaccatctagagagatacaagcatgtgataatgcagaga
ttacaaagtgctaaagacctggctacatttctactagagctacaaacactgctggagaga
acaatgtccaaatcagacgtcacaagtacatcagcacagaccgtgtctcctgcattgtac
acaaaactaataagtgagattgaggatataggttgggataggctctcatcaattgatgca
tcatttgagagtttacagttttcagccgtagatggtttgggtaaaatacattacattact
atcaacttgaattctcagtatcctgatgcagttccagcatgttctgtgtcattgccaacg
ccatttgagctgcagtggtcatcaaagggtaaactcaaggatatcttacagcaattccag
gtcactttagagaaacacaaggtattctggcagagtatgtcagaaatagacaaccaaaca
tgggtgctagaacctgacaaaccaatgccatcagattccatcagaagaatagcattaggt
aataacagttcacttcaagttactgttgatccgctacacccaggaatgctacccgagtgt
cgctttctaggagcagatcatgttgtaaaacctctaaaggaaaagttacatagtaacctt
catctatgggatactgactgctcaatattgacaaacctacagaaagttttacaagttgag
tttccatcaccatcatcaacacaaaaacaggaactgagtgaagagtgtggaatttgttac
acatatcgattagaatctgccataccagaccaagcatgtgataacccccagtgcaataaa
ccatttcatcaagcatgcttatatgagtttacttcaaccttaccatccagtcatcagacg
atgtccaaatatggttttaacactacatatggtgaatgcccatattgcaaccagccaatc
acagtcaagaaaatggacacatga
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