Amphiura filiformis: 140152636
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Entry
140152636 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX2-like
KO
K09173
regulatory factor X 1/2/3
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140152636
Transcription factors [BR:
afil03000
]
Eukaryotic type
Other basic domains
RF-X
140152636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
140152636
NCBI-ProteinID:
XP_072031161
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All DBs
Position
5:12335699..12375375
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AA seq
718 aa
AA seq
DB search
MATQTYEMQAITVSQSQQDQQQHTTSTTLQPQTIIAQPQQAHTLQPVQQFVQVATAQPSN
ALKDSSRPTTTLTLQTTGQGGPQTAVYQGHVQYVDGGDHTSTIYANGAMANNYPYSEGTT
MYAQPTPISSTYYTSSAGQGLMTSSNLQTLGSVASVGSNLGTLVGGAGALIGGGTVIGSS
QLVAQPGGTYVLQGHMMDGEGLPVTHTTRASPATVQWLLDNYETAEGVSLPRSTLYNHYL
RHCNEHKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKYHYYGIRIKSGSILNQYQDDG
CHTAMRQQPINSAKRFKSNPVSGKMEAADGIGGGGQQGSGGEQQSQTQQHQQFLGDAAQA
LPAFDEIKIGDIPLPDGLTQNDVNEFESMYREHCESVLDVVVNLQFALIESLWQTFWRNQ
PDEDYRMNDNNLEEKLPKEKLILMCQCKDIQEYIKSYDHVLYQGLVEVLIPDVLRPIPSA
LTQAIRNFAKSLEGWLKNSMNGIPPAMMGIKIGAVTAFAQTLRRYTSLNHLAQAARAVLQ
NTSQINQMLSDLNRVDFANVQEQASWVCQCEDKVVQKLEQDFKRTLQQQNSLEEWASWLE
GVVNQILKPHENSPNFAKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
FYLIEHRVASATGETPIAVMDKVDGRGERLMNSSASNANTLTLAASTNDKVDGRERDY
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacagacttacgaaatgcaggcaataaccgtatcacaatcacagcaggatcag
cagcagcacacaaccagcacaacccttcaaccacaaaccatcatcgcacagccacaacag
gcacatactctgcaaccagtgcaacagtttgtacaagtggcaacagcccaaccgagcaac
gcacttaaagattcatcgaggcccaccaccacactcacgctgcagaccacggggcaaggc
ggccctcagacggccgtttaccagggccatgtgcagtacgtagatggaggcgaccatacc
agtaccatctatgctaacggcgctatggccaacaactatccttacagtgaggggaccacc
atgtatgcacagccaacacccatctcctctacatactacacctccagtgcaggacaaggg
ctcatgacatcgagcaacttacagacccttggttcagtggcgtcagtgggcagcaacttg
ggtacccttgtcggaggtgcaggcgcactcatcggaggtggcacagtgataggaagttca
cagttggtagctcaaccaggagggacctatgtcttacaggggcatatgatggatggggaa
ggccttccggttacacacacaactagggcatctcctgcaacagttcaatggctgctggac
aattacgagaccgccgaaggggtgagtttaccacgcagtacgctgtataatcattatctg
cgacactgcaatgagcacaagctggatccagtgaatgcagcatcttttggtaaactcata
agatctgtgtttctgggattgaggactagaagactgggaacaaggggtaattctaagtac
cattactatggtattagaataaagagtggctcaatactgaatcagtatcaagatgatggt
tgccatacagcaatgaggcagcaacccatcaattcagcaaaaagattcaagtctaaccca
gttagtggtaaaatggaagcagctgatggcataggaggcggtggtcagcaaggcagtggc
ggagagcagcagagtcaaacgcagcaacaccagcagtttctaggggatgccgcacaggcc
ttgccagcctttgacgaaatcaaaataggagatattccactgccggatggattgacgcag
aatgatgtcaatgaatttgagtccatgtacagagaacattgcgagtctgtattggatgta
gtagtgaatctacaatttgcattgattgaatcattatggcaaacattttggagaaatcaa
ccagatgaagattacagaatgaatgataataacctggaagagaaactacctaaggaaaag
ttaatattgatgtgccagtgtaaagatatacaggaatacattaagagttatgaccatgtg
ttgtaccaggggttggtggaggtacttataccagatgtactcagacctattccaagtgcc
ttgactcaagcaattcgaaactttgccaagagtctagagggatggctgaagaacagcatg
aatggtataccaccagcaatgatgggtataaagattggagcagtgacggcatttgcgcag
actctgcgtcggtatacctctctgaatcacttggcacaggctgcaagagctgtgcttcaa
aacacatcacaaatcaaccagatgctgagcgatctcaacagagtagactttgctaatgtg
caggagcaagcatcatgggtgtgccagtgtgaggacaaagttgtacagaaattagagcaa
gacttcaaaagaacgttgcaacagcagaactccctagaagagtgggctagctggttagaa
ggagtggttaatcagattctcaagccgcacgaaaactcgcccaactttgccaaggctgcg
aggcaatttcttctaaaatggtcattttatagttcaatggtaattcgtgacttgacattg
aggagtgcagctagttttggatcctttcatctcattaggttgttgtatgatgaatacatg
ttctacttgattgaacacagggtagcatcagccacaggggaaacacctattgctgttatg
gataaagtggatggtagaggagagaggcttatgaatagcagtgcttcaaatgcaaacaca
ttaacactggcagcatcgaccaacgataaagtggatggtagggagagagactattga
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