Amphiura filiformis: 140152659
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Entry
140152659 CDS
T10871
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140152659
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
140152659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
PurS
Motif
Other DBs
NCBI-GeneID:
140152659
NCBI-ProteinID:
XP_072031207
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All DBs
Position
5:complement(12501521..12524785)
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AA seq
450 aa
AA seq
DB search
MWSFEYAENEHIFISRSTSLNIPGTSSDKIMSRRNGEEHAEECNGPGHFVTLLNLLKECL
LCHRWKQSGKILSSLCLYPSAEYEKGMPGRELIWKCGIEMLYHHPDATYKDISQFHSKRC
QLDAKVSPYKRLLDHAFYLLSEQKVKEAYGVIKMKATIGKLQQVYPRTSKQAEYEKHTLQ
NVWKDLVSAYTGVVAYMLWYQTGAENSADTKQEVEKFWETAVLHLGQMTDKPGVWDVFIT
KHLELLCSKDQMEEAVELARKYCDTNPENPNAHKYLYHQMKSNGADTSSLIEVLKDIINR
LPSDELVLEYVDLLRQESKHCHKDYLPPLFNLLDFACWRDEVKPWQALADRLCSIHLKKS
RLGVKVMKSCWKQRQGWWGDYHFDTLHASQIAKRDKLLAVQKATVATFLLNPDCGFVWEV
TKYFSRHKKRKCLKRLEKAKEAHQFQHIAD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctttgaatacgctgaaaatgaacatatatttatttcaagaagtacatcattg
aatatacccggtacatcatctgacaagattatgtcaagaagaaacggagaagaacatgct
gaagagtgcaatggaccaggccattttgtaaccctgctaaatctgcttaaggaatgtctg
ttatgtcatagatggaagcagtcaggtaaaatcttatcctctctgtgcttgtatccatca
gcagagtatgaaaaaggcatgcctggtagagaactcatctggaagtgtggaattgaaatg
ttataccaccacccagatgctacatacaaagacatctcacagtttcacagtaaaagatgc
caactggatgcaaaagtctcaccatacaaaagacttcttgatcatgccttctaccttctc
agtgaacagaaagtaaaggaagcatatggagtgattaaaatgaaagccaccattggaaag
cttcagcaggtatatcctcgtacatcaaaacaagccgagtatgagaaacacacattacag
aatgtatggaaagacctggtgtcggcctatactggtgtagtggcttatatgctgtggtac
cagacaggagctgaaaactctgcagatacaaaacaggaagttgagaaattctgggagact
gctgtgttacatcttggtcagatgactgacaaacctggagtatgggatgtatttatcacc
aaacatcttgagttactatgcagcaaagatcaaatggaggaggctgtcgagctagccaga
aagtactgtgatactaatccagagaacccaaatgcacacaagtacctgtatcatcagatg
aaaagtaatggtgctgatacaagcagcttgattgaagtcttaaaggatattataaataga
ctaccatcggatgaattggttctcgagtatgtggaccttttacgacaagagagtaaacat
tgccacaaagattacctaccaccactgttcaacctgttggactttgcatgttggagggat
gaagtgaaaccatggcaagcattagctgatagactttgctctatacatctcaagaaatca
cgccttggtgtcaaagttatgaagtcatgttggaagcaaagacaaggctggtggggagac
tatcactttgatacccttcatgcatcacaaattgctaaacgagacaaacttcttgctgtt
caaaaagctacagtagctacgttccttctcaatcctgattgtggttttgtttgggaggtc
accaaatacttttcaagacacaaaaaacggaaatgtttgaaaagactcgaaaaagccaaa
gaagcccaccaatttcagcacattgctgattga
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