Amphiura filiformis: 140153292
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Entry
140153292 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
afil Amphiura filiformis
Pathway
afil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140153292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afil03009
]
140153292
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
Pre-60S particles
GTPases
140153292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
140153292
NCBI-ProteinID:
XP_072032102
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All DBs
Position
5:complement(48901018..48927611)
Genome browser
AA seq
1147 aa
AA seq
DB search
MRTVTPQRLAELQQKPEHIRNICILAHVDHGKTTLADALISSNGIISSRLAGKLRYMDSR
EDEQLRGITMKSSAISLHCNQDGDEYLVNLIDSPGHVDFSSEVSTAVRLCDGALVVIDVV
EGVCPQTHVVLRQAWLEHIKPCLVLNKIDRLITELKYTPLEAHLHLQQVLEQINAVVGNL
FASDVMEKTSQKNENKVPSSPASKEKPKNEDHVYDWSDGLEETDDSHIYFSPDQGNVIFA
SAIDGWGFGINQFADLYATKLGVKADVLRKTLWGDFFLNTKTKRIMKGAQAKGKKPLFVQ
FVLDNIWAMYETVLIRRDKEKMDKIIKSLDLKIAARDLRNNDPKIHLQAICNQWIPISKA
TLGMVCEKLPSPLEISEERIDKLMCSGGRRFDSLPQQTQNLKTAFQQCSSGEDAPVIVYV
SKMFAAESKTLPHNRQRPLTQEELEQRREQARQRHAERKAATELKAAGEEMEEKTDETKQ
EKGEAAPKVVAFSNHDEIFELTDEKPAKKEQDETFIAFARVFSGTLSKGKKLLVLGPKHE
PQKALEGAEEIENVSDQTDVSDLHISEFTVSDLYLLMGRELEILPEIPAGNVLGIGGLEQ
LVLKSATLSSTVACPAFTSMTFAAVPIVRVAIEPKHLAEMPALLQGLKLLNQADPCVQVL
LQETGEHVIVAAGEVHLERCLDDLRKRFAKIEIDVSAPIIPFRETIIIPPKIDMVNEVID
DINQRKQQDMAXEFESEGIIISKDRQLEIQTSNEKCTFRLRAIPLPESVTAILEENSELM
RILDQFSAVTYGSRPGEQLGTITLTESAIEQLLELKQKLEAAFVESGKKWRNAINQIWSF
GPRRNGPNMLLNRIEDYDRVNIWQCLDKEADRKNGCIREYDNSIVSGFQLATLAGPQCEE
PMMGVCFAIEYWQIEGGKHNSVNIGNPNQDNGVVDSSVQPIQSSDRTSIDVETLESITPV
GSPDLSSPISSPAGSLIRRVYGPLSGQIISTVKEGCRIAFQVQPQRLMAAMYKCDIQCTA
EALGRMYAVVSKRNGQVLQEEMREGSPIFDITAALPVAESFGFAEEIRKRTSGLASPQLF
FSHWEVITSDPYWVPSTEEELLHFGEKADYENQARKYMNDVRRRKGLFVDEKIVEHAEKQ
RTLSKNK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtaacacctcagcgattggcggaactccaacagaagccagagcacatacgc
aatatttgtatcctggctcatgttgaccatggtaagacaactctagcggatgcattgata
tccagcaatggcatcatctcttcccgtttggctggtaagctgcgttatatggatagcaga
gaggatgaacagctacgcggtattaccatgaaatcaagtgccatctcactgcactgtaat
caagatggtgatgagtacctagtgaatttgattgattcccctggacatgtagacttcagt
agcgaagtctcaacagcagttagactctgtgatggcgctctagtggttattgatgtcgta
gagggcgtatgcccacagacacatgtagtgttacgacaagcctggttggagcacatcaaa
ccatgcctagtattgaataagatagaccgtctgatcacagagctgaaatacacccctttg
gaggcccatctacatctacagcaagttttggagcaaattaatgcagtggttggcaacctc
tttgcttcggatgtaatggagaaaacttcacagaagaatgaaaacaaagttccatcaagc
ccagctagcaaggagaagcctaagaatgaggatcatgtgtatgattggagtgatggctta
gaagaaacggatgattcacacatttatttttcacctgatcaaggaaatgtgatctttgct
agtgctattgatggatggggatttgggatcaatcaatttgctgatttgtatgccaccaag
cttggagtgaaggctgatgttttacgcaaaaccctgtggggtgacttcttcctcaatacc
aagactaaacgcatcatgaaaggagctcaggccaaagggaagaagccattatttgttcag
tttgtacttgataacatttgggccatgtatgaaacagtgttgataagaagggacaaagag
aagatggataagatcatcaagtcattagatctgaagatagcagccagagatctgaggaac
aatgaccctaagattcatctacaggctatctgtaaccagtggataccaatctctaaggca
acactaggcatggtttgtgagaagctgcccagcccacttgagataagtgaagagagaatt
gacaaactgatgtgcagtggaggacgaaggtttgattcactaccacagcagactcaaaat
ctaaaaacagcctttcagcaatgttcttccggtgaagatgccccagtgattgtttatgta
tccaagatgtttgctgctgagagtaagacattacctcataacaggcaacgcccattgaca
caagaggaacttgagcagcggagagagcaagcaagacaaagacatgcagagaggaaggca
gcaacagaattgaaagcagctggtgaagaaatggaagaaaaaacagatgaaaccaaacaa
gagaaaggagaagcagctccaaaggttgtggccttttccaaccatgatgaaatctttgag
ctaactgatgagaaaccagccaagaaagagcaggacgagaccttcatagcatttgctaga
gttttcagtggtaccctaagcaagggtaaaaagttgttggtgttaggtcccaaacatgaa
cctcaaaaagctttagaaggggcagaggagatagagaatgttagcgatcaaactgatgtg
agtgatctccatataagtgaattcactgttagtgatctctatctactgatgggaagagaa
ctggaaatattaccagagatacctgctggaaatgtactaggtattggtggcttagagcag
ttggtgttgaagtcagccaccctatccagtactgttgcatgtccggcttttacatccatg
acctttgctgctgttccaattgtcagagttgccattgaaccaaagcatctcgctgaaatg
ccagcactattacaaggactgaagttgctgaatcaagcagacccatgtgttcaagtacta
ctacaagaaacaggagagcatgtgatagttgctgctggtgaggtccatctagagagatgt
ctggatgatctgagaaaaagatttgcgaagatagagattgacgtgtctgctcctataatc
ccattccgcgagaccatcatcattccacctaagattgatatggtgaatgaagttattgat
gacatcaaccaacgcaaacaacaagacatggcannagaatttgagagtgaaggtatcatc
atctccaaggacagacaactggaaattcagacctccaatgagaagtgtactttccgtcta
agagctatacctctgcctgaaagtgtcacggcaatactcgaggagaattctgaattgatg
aggatattagatcagttttctgccgtaacttacggaagtcgacctggcgagcaactgggg
actataactttaactgaatctgctatagaacagttgctggagttgaagcaaaaacttgaa
gctgcttttgttgaatcagggaaaaagtggcgcaacgctataaaccaaatttggtcattt
ggaccaaggagaaacgggcctaatatgttgttgaataggattgaggattatgatcgagta
aatatatggcaatgtttggacaaagaagcggacagaaaaaatgggtgtatacgagagtat
gataacagcattgtgagtgggtttcagcttgcaacacttgctgggcctcaatgtgaagaa
cctatgatgggtgtatgctttgctatagaatattggcaaatagagggtggtaaacataac
agtgtcaacataggcaatcctaaccaagacaatggagttgtagactcttctgttcaacca
atacaaagttctgatagaactagcattgatgtggagactttggagagcataactccggtg
ggctcgcctgacttgtcaagtccaatttccagtccggcaggtagtctcatacgcagggtt
tatggacctctatctggtcagattatatctactgtaaaggaagggtgtagaattgcattc
caggtgcagcctcagagactaatggcagctatgtataaatgtgatatacaatgtactgct
gaagcgctaggtcgtatgtatgccgtggtgtccaagcgcaatggtcaggtgctacaagaa
gagatgcgtgagggttctcctatctttgatatcacagcagcattaccagtagcagaaagt
tttggttttgcagaagagatcaggaaaagaaccagtgggttggcaagtcctcagttattc
ttcagccactgggaggtaatcaccagtgacccctactgggtgccgtcaactgaagaagaa
ctacttcactttggtgagaaagcagactatgagaaccaagcacgcaaatatatgaatgat
gtgaggaggcgaaaaggactctttgtggacgagaagattgtcgaacatgcagaaaaacag
aggacactatctaaaaataaataa
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