Amphiura filiformis: 140153378
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Entry
140153378 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: protein jagged-1b-like
KO
K06052
jagged-1
Organism
afil Amphiura filiformis
Pathway
afil04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140153378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afil04090
]
140153378
CD molecules [BR:
afil04090
]
Proteins
140153378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
DSL
EGF_DL_JAG
EGF_2
JAG1
JAG1-like_EGF2
EGF_CA
EGF_3
EGF_Teneurin
cEGF
FXa_inhibition
Glycophorin_A
Podoplanin
DUF6479
Motif
Other DBs
NCBI-GeneID:
140153378
NCBI-ProteinID:
XP_072032218
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Position
5:complement(54461597..54525605)
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AA seq
1245 aa
AA seq
DB search
MINCRDLVVVVGLLLLLIVQIKLTHASGYFEIQLLSIKNEHGELSSGQCCDGTRSMAGTC
TDPCETFFTVCLKEYQSRATAEGHCTFGTNHTAILGRNSYKXDVLGDSTGADLEAVAKAT
MIFPFEFGWVQTFTLIVEACDKDEEQEQQCSDSSCLIERAFHSGLIIPGPSWIPIRYSGA
TALILYRIRVMCDANYYDNTCTKYCKPRDDSFGHYVCDQNGDKICKDGWMGERCQTAICR
QGCHSIYGDCQVPGECKCRPGWKGELCNQCEPYPGCVHGSCDSPWQCKCETHWGGLLCDQ
DLNYCGRHHPCLNGGVCTNSNPNEYQCQCPEGFTGINCQNAERVCDSNPCSNGGSCAETR
DGFTCSCTQGWYGPQCQQNFDDCQSQPCLNGGVCEDRINSYYCHCTTHWQGIMCQFDADE
CQGMPCKHAFACRNLLGDYMCDCQPGWTGKDCDVNVNDCVGNCQNGATCLDLVNSFQCVC
APGFTGLECEMNINECASIPCQHGGRCEDLVNGYQCHCSPGFSGQNCQIDVDLCDPNPCT
NGARCFNVLGDYYCACAESFQGKNCSETRHRCTGVACEDVDSCTVSVPSGGGVHLERSSV
CGVHGTCISQAGGHFTCICDVGYQGLYCHENINDCALNPCQNQGICVDGVNSYRCICPEG
WEGHLCQLGVNECAVSPCRNNGTCVDRHADFTCLCANGWKGKTCNSRESHCDTNTCGHGG
TCTDLGHSYTCRCPTGWEGTSCQIETNNDCSLNPCDNGATCVPTGSSYTCLCKDGYEGRR
CELDIDDCSHHPCYNGGQCVDGINWFLCQCASGFAGPDCRTNINECSSSPCAYGSTCVDG
IGSFTCVCPPGRIGTTCSEVVGFTQMPDDCIVGRHHYPHGFTWRQDCNTCKCENSNVVCS
KVWCGPSVCLASDTGTHSQTANFTCNDGEICESSSEESCITAPCDLWGVCMDKDRSVYPK
NEDNLCYPNATVFAPRCIALTLTFHTTMLPVGVSVEYVCANLRQISSAHSVTDESSVIVL
CERTKDQINAITVTLSMSGSDDGNAAEVAEEIADAMVEYIMTKPTNDSIILAIAKIEKHI
GQQVFQQQPGSYTVILLGSLIGVLVTVVILGIILFVCYKRRRAQKPVIEEPPIQNDGAQD
SPVHEVNHLRARNNDIVKNVMGIDPEEEKKLIWKEERRKEADGEESVDFGGYEIPCTSKW
QLRKGNSTVLSIFKAETAEAQNNRLEMLESPRKKLNSERELEQMV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattaactgcagagatcttgtggtggtggtcggtctactgctattactaattgtccaa
ataaagttaacacatgcatctggctactttgagattcaactattatcgatcaagaatgaa
cacggagagctaagcagtggtcaatgttgtgacggtaccagatcaatggctggtacatgc
acagatccttgtgaaacattcttcacagtttgtctgaaagaataccagagtcgtgccaca
gcagaaggacactgtacgtttggtacaaatcacactgccattttgggcaggaactcttat
aagntagatgttcttggagacagcacaggggcagatttggaagcagttgccaaggcaaca
atgatattcccatttgaatttggttgggtgcaaacattcactctaatagttgaggcctgt
gataaagatgaggaacaagaacaacagtgttcagattcatcatgtttgattgagcgtgca
tttcactcaggtttaatcatccctggaccgtcatggataccaatacgatacagcggtgca
actgcactcattttgtatagaatacgtgtcatgtgtgacgcaaactattatgataatact
tgtactaaatactgtaaacctagagacgactcatttggacattatgtatgtgatcaaaat
ggagataagatttgtaaagatggatggatgggagaaagatgtcagacagctatttgcaga
cagggctgtcattctatctatggagactgccaagtaccaggtgaatgcaaatgtagacct
ggctggaaaggcgaactgtgcaaccaatgtgaaccttacccaggctgtgtacatggtagt
tgtgattcaccatggcagtgtaaatgtgaaacacattggggaggactcctctgtgatcaa
gatttgaactattgtggcagacaccatccttgcctaaatggaggagtgtgtaccaactcc
aatccaaatgaataccaatgccaatgtcctgaaggattcacaggcattaactgtcaaaat
gctgagcgtgtgtgtgattctaatccatgttctaacggtgggtcatgtgcagagaccaga
gatggcttcacatgttcctgtacacaaggatggtatggaccacaatgtcaacaaaatttt
gatgactgccaatcacagccttgtctcaatggaggtgtttgtgaagatagaataaacagt
tattattgccactgtacaactcactggcagggtattatgtgtcaatttgatgccgatgaa
tgtcaaggtatgccgtgtaagcatgcatttgcctgtcgtaatctgcttggagactatatg
tgtgattgtcaaccaggatggacagggaaggactgtgatgtcaacgtaaatgactgcgtg
ggaaactgtcagaatggggcaacatgtctggacctcgtcaactccttccagtgtgtttgt
gcccctggatttacaggcctagagtgcgagatgaatattaatgaatgtgctagcattcct
tgccaacatggaggaagatgtgaagacctggtcaatggataccaatgccattgctcacca
ggattctcaggacaaaattgtcagattgatgtggacttatgtgatcccaacccttgcacg
aatggtgctcgttgttttaacgtgcttggggattactactgtgcttgtgctgagagtttc
caaggcaagaattgctccgagacaagacatcggtgcacaggggtagcatgtgaagatgta
gacagttgtacagtgagtgtgccttcagggggaggagtgcacctggagagatctagtgtg
tgtggtgtacatgggacatgcatcagtcaagctgggggacatttcacttgcatatgcgat
gtaggatatcaaggactctactgtcatgagaatattaatgattgtgccttgaatccgtgt
cagaaccaagggatctgtgtagatggagtcaactcctaccggtgtatatgtcctgaaggt
tgggaaggacacctgtgtcaacttggggtaaatgagtgtgcagtatcaccatgtcgtaat
aatggtacatgtgtggacaggcatgcagacttcacttgtctttgtgcaaatggatggaaa
ggcaaaacttgcaactcacgtgagagccactgtgatacaaatacttgcggacatggtggt
acttgtacagacttgggtcattcctatacatgcagatgtcctacaggatgggaaggaact
tcttgccaaatagaaactaacaatgactgttcactgaatccttgtgacaatggtgccacc
tgtgttcccaccggtagctcttatacatgcctctgtaaagatggctatgaaggaagacgg
tgcgaactagacattgatgattgcagtcatcatccctgctacaatggaggccagtgtgtt
gatggtatcaactggtttctgtgccaatgtgccagtggatttgctggacctgactgtaga
acaaatataaatgaatgttcctccagcccatgtgcttatggtagcacctgtgtcgatggc
ataggctcattcacatgtgtatgcccccctggacggataggaacaacttgttcagaagtt
gtaggctttacccagatgccagatgattgcatcgttggtcgtcatcattatccacatgga
ttcacatggagacaagactgcaatacctgcaaatgtgaaaatagcaatgtagtatgtagc
aaggtatggtgtggtccatcagtgtgtctagcatcagacactggtactcatagccagaca
gccaacttcacatgcaatgatggagaaatctgcgagtccagttcagaagagagttgtata
acagctccatgtgacttgtggggagtgtgcatggacaaagacagatcggtgtacccaaag
aatgaggacaatctatgctatccgaatgcaacagtgtttgctcctaggtgcattgcattg
acattgacattccatactaccatgttacctgtgggtgtatctgttgagtatgtttgcgcc
aatcttcgtcagatatccagtgcacatagtgttacagatgaatcttcagtcattgtattg
tgtgaaaggaccaaagatcaaatcaatgccatcacagtaacactgtctatgtcaggatca
gatgatggcaatgcagctgaggtagcagaagaaatagctgatgcaatggttgagtatatc
atgactaagcctactaatgactccatcatcctggctatagccaaaattgagaaacatatt
ggacaacaggtcttccagcaacaacctggatcttatactgtgattctacttggcagcctg
ataggagtgctggtgactgtggtcatattgggtatcatcttatttgtatgttataaacgt
agaagagcccagaaacctgtcatagaagagccaccaatccagaacgatggtgcacaagac
tcaccggtacatgaagtgaatcatctgagagcaaggaacaatgacatagtaaagaatgtg
atgggtattgaccctgaagaggaaaagaaactaatatggaaagaagaacgaaggaaagaa
gccgacggagaagagtcggtagactttggaggttatgaaataccttgcacatcaaaatgg
cagctgagaaaaggaaatagtactgtgttgtcaatatttaaagcggaaacagctgaagca
cagaataacagactggaaatgcttgaatccccacgtaaaaagttgaactctgaaagagaa
cttgaacagatggtctga
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