Amphiura filiformis: 140153799
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Entry
140153799 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: pinin-like
KO
K13114
pinin
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
afil03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140153799
Spliceosome [BR:
afil03041
]
Complex C
Other components
EJC/TREX
140153799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140153799
NCBI-ProteinID:
XP_072032755
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Position
5:complement(80364964..80402022)
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AA seq
544 aa
AA seq
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MADESVVLLQEQLEKAKESLQSVDENIRRLTGREPGERVERRSVGDLRRVSVGSSRGRGP
LGQRQDAFQRLGPSPAKRPNLGSAFSRLGGRVGGPGSMRRPMRRRDDSDEEDLPHKPAVQ
SSVVAAPKSMRXRKDSIEEQNQDKEGKKRNRRMFGLLLGTLQQFKQESSQTTEKDRRRDK
IEQKLEQKASEEKEALANERKFLFLERKAKQAKLEDLEQLMELAKEQDDWDTNARNLNCF
IRTKARPHLFYRPKRSSKLSSERHEESRELIKDQARKRRIEIEDEIKKAGAEDDGEEERE
DRKRRKSGEGRSKEGKEGDKGKPKERRRHSEGKGKDDKDDEEESRSRRRNGQEHHKDDDG
KDRRDEGRRRRRSERERSRDKDGESRKAGGDGKKESGKDSGKTRDRHRSRTSSGDKKDSK
QDEMEEGEVDQEKTTEEDKKAAMAEDQEEGEVMDTDEHSAKPTDSVDEKEDGEVPESGEQ
QVGEVSSSKEENVKVEQKVDDEKKEETDDGEKDTKDAVVMKDEETPMEEGETKDDDDDEE
EKAV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaatcagtcgttttgctgcaagagcagctagaaaaggccaaagagagtctg
caaagcgttgatgaaaacatacgaaggttgactggcagagaaccaggagaacgtgttgaa
cgcagatctgttggtgatcttcggagagtttcagttgggagtagcagaggcagaggacca
ctaggccagaggcaagatgcatttcagcgacttggaccatcccctgcaaaacggcctaat
cttggaagtgccttcagcaggttgggtggtcgagttggaggaccagggtctatgaggagg
cccatgcggcgacgggatgatagcgatgaggaagacttgcctcataagcctgctgtgcag
tcctctgttgtagctgcgcccaaaagtatgcgtnaccggaaagattccatagaggagcag
aaccaagacaaagagggaaagaagaggaataggcggatgtttggtctcttgctgggtaca
cttcagcagtttaaacaagagtcatcacaaacaacagaaaaggacaggagacgtgacaaa
attgagcagaaattggaacagaaagcaagtgaagaaaaagaggcgcttgccaatgaaagg
aaattcttgtttttagaaagaaaagcaaagcaagccaagttggaggacctagagcagcta
atggagcttgctaaagagcaagatgactgggacactaatgctaggaatttgaactgtttc
atccgcaccaaagccagaccacatctattttataggcctaaaagatccagtaagctctct
agtgaaagacatgaagagagtagggagttgatcaaagatcaagcccgcaaaagaagaata
gaaattgaagatgagattaagaaggcgggagcagaagacgatggtgaagaagagagggag
gacaggaaaagaagaaaatcgggtgaagggagatcaaaggagggtaaggagggtgataag
ggtaagccgaaggagaggaggaggcacagtgagggaaagggtaaggacgataaagacgac
gaggaggaatcgcgaagtagaaggagaaatggacaagaacatcacaaagatgatgatggg
aaagatagacgggacgaaggacggagacgacggcgatcggagagggagagatccagagat
aaggatggggaatcaagaaaggctggtggtgatgggaagaaggaatctggtaaggattca
ggtaagactagggatagacataggagtaggacatcttccggcgataaaaaggactctaaa
caagatgaaatggaagagggagaggtggaccaagagaagacaacagaggaggataagaaa
gcagccatggcggaggatcaagaggaaggagaagttatggatacagatgaacattctgct
aagccgacagattctgttgacgagaaagaggacggagaagtgccagagtcaggggaacaa
caagttggcgaagtcagcagtagcaaggaggaaaatgttaaagtagaacagaaagtagat
gatgaaaagaaggaagaaactgacgatggtgaaaaggacacaaaggatgcggtagttatg
aaagatgaggaaactcccatggaagaaggagaaaccaaagatgatgacgatgacgaagag
gaaaaggctgtttaa
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