Amphiura filiformis: 140154909
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Entry
140154909 CDS
T10871
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afil03036
]
140154909
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140154909
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
140154909
NCBI-ProteinID:
XP_072033671
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All DBs
Position
6:complement(7421518..7472070)
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AA seq
1231 aa
AA seq
DB search
MSGIPGAVIMPATRGGKRMPPMEPEPQPQYMAGQEGGLLMQEGALMGQEPGAMMMQQPQA
MEGDPMHQGQSEDGSDIEEGGKGKRKKETQTGSKRGKKKSKRGGGDNESEDGEPVTMFEI
VRQGKGALQTVVDEWIEGYKVNRDSALLDIINFFIQSSGCKGTVTPEMHSTMEHSDIIRR
MTEEFDEESGDYPLIMTGPLYKKFRTNFCDFIAVLVRQCQYSILYDQYMMDNIISLLTGL
CDSQVRAFRHTSTLAAMKLMTALVNVALNLSVNLDNMQRQHEAERAKQTSKRASERIEML
LAKRQEILENTEEVQQMMNNIFKGVFVHRYRDTQPEIRSICMGEIGIWMKNYSEMFLSDS
YLKYLGWTLHDKTGDVRLKCLSALQALFGHSDLVSKLELFTNRFKDRIVAMTLDKETDVA
VQAIKVVTLVLKHNEDILTAEDCENVYQLVYSSSRNVAQAASQFLNERLFKREDPDSKAK
RTKRRSTNAPLIKDLVQFFIESELHEHAAYLVDALWDINDMVRDWDCMTELLLEEPGRGE
EALDYRQETALIEIMVSAVRQAAHGHPPVGRGSAKKQMLTSKEKKGVMDDKMKLSEHFII
KLPDLLAKYNTDWDKVANLLEIPQHFDVEIYTTSRLDKHLDALLTQMRDIVEKHTETEVL
DASAKTYECLMGEQYSTTPRVDVARSTLLDSLAEKFTRSAAAFQDVGEPGDDEIYALGSS
LKRITAFYSCHDLTGWGLYESLYGLVKKTSNRGNLPEDIFTQAIACTHYAIVWQLSKMGD
VNPDKSDMQKLTKQSGELIKTCSTLLLDSSDTIKEEAFITICDLLVVFSRQIAINPMLSP
LVYVPSENMQNMLSDFVQEHVFIEEEEEDDEEEADDSHKIEILHKRRNLLAAFCKLIVFN
IIEMKNAAGIFKHYMKYYNDYGDIIKMTLAKSREINKISCARTLGLSLTQLFKDMKSEEG
YDEARTQSQLNAIKELARRFSLTFGLDQIKTRDAVAALHKEGILFGLTPIEDPNNPDGPP
PNLGYLEILSEFTAKLMKQDKKVVLGFLDKHLKEGMTEKDEDVWNALRGYRNGLQQWELT
GDVTETRPRKPNRRHKGGVKRKLAMQGAYDMQMQPHQVSSLAKRLRAEEEISSQGSERDF
EAQNPSQSSTVSWLSSQRRNKASRNRRSYGSSKPAPTRKSPRTRHPAHHPQEDDDEEEEE
EDEEEEEEEEEDDFQEGQAMQVLEEMQMGPF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggataccaggagccgtcataatgccagccacacgaggtggcaagcgtatgccc
ccgatggagcctgaaccacagccacagtacatggctggccaggaagggggactactgatg
caagagggcgctctcatgggacaagaacctggtgctatgatgatgcagcaaccacaagca
atggaaggtgatcccatgcaccagggacagtctgaagatggtagcgacattgaggaggga
ggaaaagggaagaggaagaaggagacacaaactggcagcaaaagagggaagaaaaaaagt
aagcgaggaggaggagataatgagtccgaggatggcgaaccagttaccatgtttgaaatt
gttaggcaaggcaaaggagctttacagactgtggtagatgagtggattgagggatacaag
gtcaacagagactcagctttgttagatatcatcaacttcttcatccagagctcaggctgc
aaaggtaccgtcacgcctgagatgcactctactatggaacacagtgacatcatcaggaga
atgacggaggaatttgatgaggaaagtggagactaccctctcatcatgacaggacccctg
tacaaaaaattccgcaccaatttctgtgatttcattgccgttcttgtcagacaatgtcag
tacagcatcttgtatgatcagtacatgatggataacatcatctcattactaacagggtta
tgtgactcacaggtcagggcattcagacataccagcacattagcagctatgaaacttatg
acagcactagtaaatgtcgccctcaacttgagcgtcaatctcgacaacatgcagagacag
catgaagcagaacgtgctaaacagacctcaaagcgtgccagcgagcgtattgagatgtta
cttgccaaacgacaggagattctggagaatacagaggaggtacaacagatgatgaacaat
atatttaagggtgtatttgttcatagatatcgtgatacgcagccagaaatccgatccatt
tgtatgggagagattggtatatggatgaagaattacagtgagatgtttctcagtgacagc
tatctgaaataccttggctggactcttcatgacaagactggagatgtgcggttaaagtgt
ttgtcagcattgcaagccttgtttggtcactcagatctggtcagcaaactggaactcttc
acaaatcgttttaaggataggatcgttgcaatgactttggataaagagactgatgttgct
gtacaagccatcaaagttgtcactcttgttctcaaacataatgaagacattctgacagca
gaagattgtgagaatgtctaccagttggtatactcatccagtcgtaatgtagcacaagcc
gctagtcaattccttaatgagaggttattcaagagagaagaccctgacagtaaagcgaag
aggaccaaaagacgcagtacaaatgcaccgcttattaaagacttggtgcagtttttcatt
gaaagtgagcttcatgagcacgctgcgtatctagtagatgccctgtgggatatcaatgat
atggtgagagattgggactgtatgacagaattattactggaggagcctggcagaggagag
gaagctcttgactaccgacaagagacagcactgatagagatcatggtgagtgcagtaagg
caggcagcacatggacatcctccagtaggaagaggctctgctaaaaagcaaatgttaacc
agcaaagagaagaaaggagtaatggatgacaaaatgaaattatcagagcacttcattatc
aaactaccagatttactggcaaaatacaacacagattgggacaaggtagccaacctgctg
gagattccccagcattttgatgtagagatctataccaccagcagactggataaacatctg
gatgccctgctcacacagatgagagatatagtagagaaacacacagagacagaggtgcta
gatgcatcagccaaaacctacgaatgtttaatgggtgaacaatacagcacaacacccaga
gtagatgtagctagaagtacgctacttgacagtctggcagagaaattcacaagaagtgct
gcagctttccaagatgttggtgaaccaggagatgatgagatctatgctttaggatcaagt
ctcaagagaatcacagcattttacagttgtcatgacctgacaggctggggtctgtatgag
agtctgtatggtcttgtaaagaagacgagtaaccgtggcaaccttcctgaagatatcttc
acccaagctattgcatgtacacattatgctatcgtctggcaactcagtaaaatgggcgat
gtcaatcctgataagagtgatatgcagaagttgaccaagcagagtggtgaactcatcaag
acctgttccacattacttctagacagcagtgatactatcaaagaggaagctttcatcacc
atatgtgatctgttggtggtgttcagtcgtcagattgccatcaatcccatgctcagtcca
ttggtgtatgtacccagtgagaatatgcagaatatgctgtcagattttgtacaggaacat
gtattcattgaggaagaggaagaagatgatgaagaggaagcagacgactcgcacaaaatt
gaaatcttgcacaagagacgtaacctgttagcagccttctgtaagcttatagtcttcaac
ataatcgagatgaaaaacgctgcaggcatctttaaacattacatgaagtattacaatgat
tatggtgacatcatcaagatgacgctggccaaatctagggaaatcaacaagatcagctgt
gctaggacacttggtcttagtttaacacagctcttcaaggacatgaagagtgaggaaggt
tatgatgaagccaggacacaatctcagctgaatgcaatcaaagaattggccagaagattc
tcactgacatttggcttggatcaaatcaagaccagagatgcagtggcagctttgcacaaa
gaaggcatcctatttggtcttaccccgatagaggaccccaataatccagatggcccacca
cctaatttaggatacctggagattctgtcagaattcacagctaaactcatgaaacaggac
aagaaagttgtattaggattccttgacaagcatctcaaagaaggcatgacggagaaagat
gaggatgtatggaacgcattgagaggttaccgtaatggtttacaacaatgggagcttact
ggtgacgtgactgagacaagaccaaggaaacctaacagaagacataagggtggtgtgaag
aggaaactagctatgcaaggagcatatgacatgcaaatgcagccacatcaagtcagttca
ttagccaaacgtcttcgtgctgaagaagaaatttcatctcaagggtctgaaagggacttt
gaagcacaaaatccttctcagtcatctacggtgtcctggctgagcagccagagaaggaac
aaggcatcacgaaacagacgcagttatgggagcagcaaacctgctccaacacgaaagtct
cccaggactagacatcctgcgcaccatccacaagaagatgatgatgaggaagaggaggag
gaagatgaagaggaggaggaagaagaagaggaagatgatttccaagaaggccaggccatg
caagtattggaggaaatgcaaatgggtccattttag
DBGET
integrated database retrieval system
