Amphiura filiformis: 140154991
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Entry
140154991 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140154991
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
140154991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
140154991
NCBI-ProteinID:
XP_072033760
LinkDB
All DBs
Position
6:13008967..13096376
Genome browser
AA seq
2279 aa
AA seq
DB search
MTAANSAANGASLEDCHTNLFALTDLSGIKWRKLSAPCPAEQVVGPLEDPVLISFSRCLA
ANILCVWRRVALSNNANLFLDPQPTSQNSWEKELWIFWYGDDPNWDELLSAELKESSTGS
WDGGLSYECRTLLFKALHNLIERCLLSSNYVRLGRWFIRPYDGIPHPGENFSDHLSSSFS
FFLHGESTVCASVATMLHQPIIRLTSDHLAIAQGSATVFQVVLFPYGMSGVLTGHSYKAG
HQVAQKIINEWKHFYPVVPDEIKKEPSSGEDGNEEQVKEEEKETETPLHWGHDLGMXCVP
AVVEVMVGGVRLLYPSVYVMVPHSEDMMPIPTTPQPMGSSYMPTPAVHNSKMPSVVAAAM
STISLTPPTSPPDQQVLGDHKLSIMPPSGMNSSNNLAGGYLGVGGATMLDTMYGVHHEIV
APPNTVASKLAGKIWRDWTLPRDSGRISPAGSSHGGVTPASMNNTGSQPSEQQPSSNNQP
EEGSTAEMKPNIINTNNGSSGATNMWEFVDPATKISNCGCSRQKASMKPKASSAASFGKS
PPMPGHPSYSNNGSSSKHKSDSKQDRQQRNQRPITPFHHRAMMAEDFIAIEHEMANDRLT
AATTATPVPMGPSSSSSQPDVKLSSANAKFTQPSPAFRPVGTADSSLTESPPSVAPSPLV
PPPSSTTNPIENQMPTLSPYPRTGSDSGTPTTTNAPTVLSRTEVAMNALEGHDGSAHMDV
HKLTAEHGVVPHSIDGKDEDEDLLWQCFKLPLGQHTDYKRPLLPHQNCEGEELDENSLDA
LYEGDNSNEVFSQPLKKLKQERTVPVNNYELMPGVFTAEIDIKAPRIPSPDPVDPYEFDD
TSPTQYAKDGKAPMMKKGKDVKGKTPKGLIARRNSKKLQERKKMEEEAQRRASEEEKMKH
EHNSQNGAQNGDDGPLSSLPKAKLDGIGTSLTQEKDLVLTGNDLDNLFESSSDDDMGVEF
EDITSKLPDPNTDIEPTKTHFGASLNSSTNLQGPVQNPDLTRMFPTPPSLEQQLGSPVNQ
PEYMNHGSVQGMGQTEHNNSGDLADIDVDESMLSPKPEPIEDWNFVYKVPIMERIVGPSM
YAPLKSLPSSKLPPLRITEACNYKATWQLPLSPKLDFLPATKESTVHNLHSMDTDLLNSQ
HVGRTPPAASSTIQSPAMYPGSQEPRSATNPELQSPASETSSYARNLNSLEAPTPSNNIP
EAHSLFVNLALSDSLLNVFKDRNFDSCVICACNMDINGADAALYAPDLGIPCSCGFSEIM
NRRYAVGSGLFVEDESEITGQATDVALWAYHRDNPYCAGEIARRATLGRIEGAQSKDTGS
EIQRTSNTLLRLIQDQCNTPYSTLCRLNTIARRNLNNSGQLARSQLEIDDGCAVCFTALE
QGRLMSEGVGTKLPDDALLRSSCLHSWPYTPGIARGLLSSQDIVRTLSSLQPLLQDAIQK
RTMRLWERPYLVQGPLTWQVFFNILVKGTSESPEPLPIPPLLVGFDKDWLSSSPFTLHYW
EKLLLEPYSAQRDVAYIALVPDNDHVLQCALPFFKELTAVYETCKLGRHAPIAKTQRDGI
FRIGKKYAEKVATESVDGWFSEIGVLPEASKLKLYAQVCKAYVAPLLMMHPPDSSLFTIS
RHDRSGSGTSTTTSSGSTIAGSSHSSSSSMHSSSMQGSHISGQSHGSSDHGGSSGPSASM
SMPAPAQPVGSGSQKEKSDGTESKDAVNDSGIPDIIDPKDLEQPPAVVIYIVDPFAYGED
YTEEFPSVTTVGLLRCFTEIFSQLGDTLQRNIVLQIIPIHQVLQVSNSDMSLRLLSQMKT
LAFSVFSQCRRHLRPSMLGRSLTSFGPAADLEKMMREYEREAFTRVYSPPYILASLKDKQ
TELGESFGELSKQSGELFCSYCLSHDQKWMLVSCTDSKGEFLETQVINIDVPNRKRRKKV
SVRHVAFNKVWDFIMGVISKTAVPWRLVIGRFGRIGQGELRDWSILLSRRSLNNQSKILK
DMCRMCNVQTNSDFPCILSACLVSIEPEPGLRIMADSVAADKCSKNAQRDQPSCQLHTPD
DATCTHILVFPTSATKQVASAGPAEPILDINFGAPNDNVDDLISTFAEAEGFGFEDMGDL
LGLPVSPTAMTTPNGSPGAPQSPNGSPSTSRTAAAETNRATTEASTQLQPANILGDGEIE
AAVLQQPLALGYFVSTAKTGPLPEWFWSSCPEAEHSCPVFLKAALHVHNVQQTSDEILQT
KHTHPLDSNLTTDPLRYVLETYNSLSWLTVDPASGDRRSCLPIHMVVLVQLYNTIAALL
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcaaattcggcagcgaacggggccagtttagaggattgtcataccaacttg
tttgccttgactgacctttctgggataaaatggcgtaagttgagtgctccgtgccccgct
gaacaggtggtggggcctcttgaggaccccgtcctgatctccttctctcgctgcctcgct
gccaatatattatgtgtttggcgaagggttgcactgagtaacaatgcaaacttatttttg
gatcctcaacctacatcacagaatagctgggagaaggaactgtggattttttggtatggc
gatgatcccaattgggatgaactgttatcagcggaattgaaagaatcctcaactggttct
tgggacggcggtttatcttatgaatgcaggacattactatttaaagctctacataattta
attgaaaggtgtcttcttagttctaattatgttcgccttggaaggtggttcatccgacct
tacgatgggatccctcatccaggagaaaatttcagtgatcatctgtcatcatcattttcc
ttctttcttcatggggagagtactgtgtgcgccagtgtggcaaccatgcttcaccaacct
attattagactcacatctgaccatcttgccatagctcagggatctgctactgtatttcag
gttgtgctgttcccgtatggcatgagtggagtcctcactggtcattcctacaaggcaggt
catcaggtagcacagaagatcatcaatgaatggaagcatttctaccctgttgtcccagat
gagatcaagaaagaaccatcctctggagaagatggaaatgaagaacaggtgaaagaagag
gagaaagagactgaaacaccgctccattggggccacgatttagggatgnnatgcgtgcca
gctgtagttgaagttatggttggcggtgtacgattactctatccatcagtgtatgtaatg
gtgcctcatagcgaagatatgatgccgataccaacaactccgcagccaatgggtagcagc
tatatgcctacgcctgcagtgcataactccaaaatgccctcagtggtggctgcagctatg
tcaaccatctctttaacaccaccaacatctccgccagatcaacaagttctcggtgatcac
aaactttctattatgccaccatccggtatgaactctagtaacaaccttgccggtggttac
ctaggtgttgggggtgccacgatgctggacaccatgtatggtgtccatcatgagatagta
gcacctcccaatactgtggctagcaaattagctggcaagatatggagagactggactttg
cctagggactccgggaggataagcccagcagggtctagtcatggtggagtgacaccggca
tctatgaacaatacagggagtcaaccttcagagcaacagccatcatctaacaaccagcct
gaagaaggttctactgcagagatgaaacccaacatcatcaatacaaataatgggtcatca
ggggcaactaacatgtgggaatttgtggatccagctaccaaaatttcaaattgcggttgt
tcaaggcaaaaggcatcgatgaagcccaaggcatcatcagcagcttcatttggtaaatct
cctcccatgccaggacatcctagttacagtaacaatggttctagcagtaaacataaatca
gactctaaacaagatagacaacaacgaaaccagcggcctatcacgccgtttcaccaccgt
gcaatgatggctgaagacttcattgctattgaacatgaaatggccaatgacagacttact
gccgctaccacggcaactccagtcccaatgggaccttcgtcctcctcatcgcaaccagat
gtgaagcttagtagtgcaaatgcgaaattcactcaaccgagtccagcatttcgacctgtg
ggtacggcagattcgagcctgacagaatctcccccgtccgttgcgccatccccactagtt
ccccctccatcaagtactacgaatcccattgaaaatcaaatgccaacgttgagcccgtat
ccacgcactggcagtgattcaggcacgccgactacaaccaacgcacctacagtattatcc
agaactgaagtagctatgaatgcgttagaaggccatgatgggagtgcccacatggatgta
cataaactgactgcagaacacggggttgtcccccacagtattgatgggaaagatgaagat
gaggatctgttgtggcagtgttttaaattgccattaggacaacatacggattataaaagg
ccactgttgcctcatcagaattgtgaaggagaggagttggatgaaaatagtttggatgct
ctttatgaaggagacaatagcaatgaagtcttttcgcaaccattaaaaaagctgaaacaa
gagcgaacagtaccagtgaataactatgagctgatgcctggtgtattcactgcagagatt
gacatcaaagcacctaggataccctcaccggaccctgtcgatccatacgagtttgacgac
acatcaccgacacagtatgctaaagatggtaaagccccaatgatgaagaaaggcaaagat
gtcaagggcaagacgccaaaaggtctgattgcaagaagaaacagcaagaagttacaagag
aggaagaaaatggaagaagaggcacagagacgagcatcggaagaggagaagatgaaacat
gagcataactcacaaaatggcgcacagaatggtgatgatggtccattatcttcattaccc
aaggctaagcttgacggtataggtaccagtctgacgcaggagaaggatctggtgctcacc
ggtaacgacctggacaacctctttgagtcatcatctgatgatgatatgggtgtggagttt
gaggatatcacaagtaaactaccggatcccaacactgatattgaacctacaaagactcat
tttggggcttcactaaacagtagtaccaatttacaaggcccggtccagaatcctgacctg
acacggatgttccccaccccaccgtctctagaacagcaacttggatcaccagttaaccag
ccagagtacatgaatcatggttcagttcaagggatgggacagacagaacataacaactcc
ggtgatcttgccgatattgatgtggatgaatccatgttgagtccgaaaccagaaccaatt
gaagattggaattttgtatacaaggtaccaataatggagcgtattgtagggccaagcatg
tatgcaccactcaagtcactgccaagtagtaagctgcccccactaagaataactgaggcg
tgtaactataaggcaacatggcagctacctctttcaccaaagctagattttctcccagcc
accaaagaaagtactgtacacaacttacacagtatggacacggatcttcttaatagtcag
cacgttggccggaccccacctgctgcaagcagtaccatacaatcccctgcaatgtatcct
ggtagtcaggagcctagaagcgccacaaatccagaactccagtcgcctgcctcagaaacc
tcatcctacgcaaggaatctgaactcattagaggcaccgacaccatcgaacaacatccca
gaagcacacagtttgtttgtgaaccttgcactgtcggattctttactcaatgtgttcaaa
gatcgtaactttgactcatgtgtcatttgtgcctgtaatatggacatcaacggggctgat
gcagccctctatgcaccggatttgggcataccgtgtagttgtggtttcagtgaaattatg
aatcgcagatacgccgtgggtagcggtttatttgtggaggacgaatctgaaataaccgga
caggcgacggatgttgccttgtgggcataccaccgagacaatccatactgtgccggtgaa
attgctagaagggcgacccttggtagaatagagggcgcccagtctaaggacactggtagt
gaaatacagagaacttccaatactctgcttagattaatccaggatcagtgcaacacaccg
tattcaactttgtgcaggttaaatacaatagctagaagaaatttaaacaactcaggacag
ctagctcgtagtcaactagaaattgatgatgggtgtgctgtgtgctttacagcattagaa
cagggtcgcttgatgtcagagggagttggtaccaagttacctgatgatgctctgctcagg
agctcatgtcttcatagctggccttatactccaggtatagctagaggcttgctatcatcg
caggacattgtccgtacactatcatccctccagccattacttcaggatgccatacaaaag
cgcaccatgaggttatgggagcggccctatctagtccaggggccgcttacgtggcaggtc
ttcttcaacattttagtcaaagggacctcagaatcaccagaacctttgcccatcccgccg
ttattggttgggtttgacaaagattggttgtcgtcttcgccattcactctacactactgg
gagaagttattattggagccatatagtgcccaaagagatgtggcttatattgccttggta
ccggataatgaccacgtcttacaatgtgccctgccattcttcaaggaactcaccgctgta
tatgagacatgcaaactcggcaggcatgctcccattgccaaaacacagagagatggtatc
tttagaataggcaagaaatatgctgagaaagtggcgacagaaagtgttgatggttggttc
tctgaaataggtgtgcttcccgaggcctccaaactgaagctctatgcgcaagtatgcaag
gcatatgttgcaccactgctcatgatgcacccacccgatagtagtctttttacaatatca
agacacgatagatcaggtagcggcacttctacaacaaccagtagtggctcgacaatcgca
ggtagttcccactcatcgagtagttccatgcacagcagttccatgcaaggaagtcacatc
agcggacaatcacatgggagttctgatcatggtggatcttctggaccatcggcatcgatg
agtatgccagcgcccgcacagcctgttggttcagggtcccaaaaggagaaatctgatggc
accgagagcaaagatgctgttaatgattctggtattcctgacatcattgatcccaaagat
ctggaacaaccaccggcagtagtgatctacatcgttgatccatttgcatatggggaagat
tacactgaagagttcccatccgtgacaacagtaggcttacttcgatgcttcacagaaatc
tttagtcaacttggcgacaccttgcaaagaaatatagtattacagattatccctatccac
caagtgctgcaggtttccaatagtgatatgtccttgcgtcttcttagccagatgaaaaca
ttagcattctcagttttctcgcagtgtaggcggcacctacggccgtccatgttgggaaga
agcctcactagttttggtccagcagctgatctggagaaaatgatgagggaatatgagagg
gaagccttcacaagggtgtactcgccaccttacatcttggcatcactcaaagacaagcaa
acagaacttggcgaatcatttggtgaacttagcaagcaatctggagaattgttctgtagt
tactgtctatcacatgaccagaagtggatgctagtctcatgcacagactcaaaaggagaa
tttctagaaacacaagtcatcaatatagatgttccaaataggaaaagaaggaaaaaggtt
tctgttcggcacgtagcattcaacaaagtctgggatttcataatgggtgtcatctccaag
acagctgtgccatggaggctggtgataggtagatttggtcgcataggccaaggagagctc
cgcgattggtccattctactaagtcggcgttcccttaacaaccagtccaaaattctcaag
gacatgtgtcgtatgtgtaatgtgcagaccaatagcgatttcccgtgtatcttgagtgca
tgcttagtgtccattgagccagagccaggcttaaggattatggcagattccgttgcagca
gataagtgcagtaaaaatgcgcagcgggaccagccaagttgtcagctgcatacaccagat
gatgcaacatgtacccacatactggtctttccaactagtgctacaaaacaggttgcatcg
gctggaccagctgaaccaatcttagacatcaattttggtgctccaaatgacaatgttgat
gacctgatttcaacatttgctgaagcagaaggctttggctttgaagacatgggtgatcta
ctagggttgccagtttctcccacagcaatgacaacaccaaacggttcacctggtgcaccc
cagtcacctaatggctcaccgagtacttcccgtactgctgctgcagagaccaatagagct
actacagaggcatctactcagttacaacctgcaaacatccttggagatggtgagattgaa
gctgccgtcctacagcaaccattagcattaggttattttgtatccactgccaaaactgga
cctctcccggaatggttctggtcttcttgtcctgaggctgaacattcttgtcccgtcttc
ctcaaggctgcattacatgttcacaatgtgcagcagacatcggacgaaatcttgcaaacc
aaacacacccacccgttggactccaaccttaccactgatcctctcaggtatgttctagag
acgtacaacagcctgtcatggttaactgttgacccagctagcggcgatcgtcgctcatgt
ctacctattcacatggtcgtccttgtgcagctgtacaacacaatagcagccctcttgtga
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integrated database retrieval system
