Amphiura filiformis: 140154995
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Entry
140154995 CDS
T10871
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
afil Amphiura filiformis
Pathway
afil03420
Nucleotide excision repair
afil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140154995
09124 Replication and repair
03420 Nucleotide excision repair
140154995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140154995
03400 DNA repair and recombination proteins [BR:
afil03400
]
140154995
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
140154995
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
140154995
TCR (transcription coupled repair) factors
Cul4-CSA complex
140154995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
DUF4595
Motif
Other DBs
NCBI-GeneID:
140154995
NCBI-ProteinID:
XP_072033765
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All DBs
Position
6:complement(13175393..13214314)
Genome browser
AA seq
1140 aa
AA seq
DB search
MAYNYVVTAHKPTAVNACVTGNFTSADDLNLIIARNSRLEIYRVTPEGLRPVKEVGIYGR
IEVMELFKPPGQEKSHLFILTARYNACILEYVKDEDSEDIVTRAHGNVQDRIGRPSETGL
IGIIDPECRVIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELNVIDVQFLHGCQVPTIVF
VHQDPHGRHVKTYEINLREKELNKGPWKQDNVETEASMVISVPQPFGGALIVGQESITYH
NGDKYVAIAPPVIKTSTLVCHGRVDANGSRYLLGDMAGRLFLLQLEKEEGMDGTVMVRDL
KIELLGETSIAECVTYLDNGVVFVGSRLGDSQLVRLNVDSDEQGSYVTVMETFINLGPVV
DMVVVDLDRQGQGQLVTCSGGYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLRVDQNSQ
FDDTLVISFVGQTRVLMLNGEEVEETELAGFDGEQQTFYCGNVFNNQLVQITASSVRLVS
APTKRMVSEWRPSSGKNISVASCNSRQIVCAVGKDLFYLEIHEGEVRQMSTVTMEHEVAC
LDITPLKEGSDFAELCAVGLWTDISSRILKLPSLETMHVEMLGGEIIPRSILMTTFEGQH
YTLCALGDGSLFYFQLDVDTGYLSERKKVILGTQPTVLKTFKSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVSNMCPLNSEGYPDSLALAIDTTLMIGTIDEIQKLHIRTVPLGES
PHRISYQEASQTFGVITTRTEIKDGSGTTSTVPNRQSASTSALNSTSSSTRVEQSSSSEG
ASFGDEVEIHSLLIIDQHTFEVLHSHHFMPFEYATSILSCKLGTDPNTYYIVGTAMVYPE
EAEPKTGRIIVFHYSDGKLQEVTEKENKGATYSLVEFNGKLLASVNSIVKLFEWTPEKEL
RPECSHYNNILALYLKTKGDFIIVGDLMRSITLLAYKPMEGCLEEIARDYNPNWMSAVEI
LDDDTFLGAENSFNLFTCQKDSAATTDEERQHLQEVGLFHLGEFVNVIRHGSLVMQNIGE
SSIPTTGSTLYGTVNGSVGLVTQLTEEFYKFLLEVQKKLTRVIKSVGKIEHSFWRSFYTE
RKTESAENFIDGDLIESFLDLNRDKMEEVVQGLQIDDGGMKRDATVNDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcgtataattatgtagtaacagctcataagcctacagccgtgaatgcatgtgtcaca
ggcaattttacgtcagccgatgacttgaacctcatcatagccagaaactctcggttagaa
atataccgtgttacaccagagggtctacgacctgtcaaagaagtgggtatatatggacgc
attgaagttatggaactattcaaacctccgggtcaagaaaagagccacctgtttatcttg
acagcaaggtacaatgcatgtatcctggagtatgtgaaagatgaggatagtgaagatatt
gtcaccagagctcatggaaatgtacaggatcgtataggaaggccttcagaaactggtctg
attggaatcattgacccagagtgtcgagtgattggtttgaggttgtatgatggtctcttt
aaggttattccgctagatagagacaataaggaactcaaagccttcaatatcagattggaa
gagctgaatgtgatagatgttcaattccttcatggatgtcaagttccaactattgtgttt
gttcatcaagatccacatggtaggcatgtcaagacatatgaaatcaacctgcgagaaaaa
gaacttaataaaggtccatggaagcaagacaatgtagagacagaagccagcatggtgata
tcagtgccacagccatttggaggagctcttattgttggccaggagtctattacatatcac
aatggtgataaatatgtggctattgcaccaccagtaatcaagacaagtaccctagtgtgt
catggtcgagttgatgccaatggatctcgctatctcttaggcgatatggctggtagactc
tttctgctgcagctagagaaagaggaaggaatggatggcactgtcatggtgagagacctc
aagattgaattgctaggagagacctcaatagctgaatgtgtaacatatttggataatgga
gtagtgtttgttggttccagacttggtgattcacaactggtcaggctcaatgtggattca
gatgagcagggctcctatgtaacggtcatggaaacatttatcaacttgggacctgtagtc
gatatggttgtcgttgacttggatagacaaggccagggacagttggtgacatgctctgga
ggttacaaggagggatcgctacgaatcatcaggaatggtattggtattcatgaacatgct
agtatagacctaccaggaatcaaaggtatatggcctctaagggtagatcagaattcacag
tttgatgacacattggtcatatcatttgttggacaaaccagggtattgatgctgaatggt
gaggaagtggaagaaactgagttggcaggttttgatggggaacagcagactttctattgt
ggtaatgttttcaacaatcaacttgtacagattacagcctcttcagtgcgacttgtcagt
gccccaacaaagcgcatggtaagcgaatggcgcccatcatctggaaagaacatcagcgta
gcatcatgtaattcaagacagattgtgtgtgccgtgggaaaggatttgttttacttggaa
atacatgaaggagaggttaggcagatgagtactgttaccatggagcatgaggtggcctgt
ctagatattactccattgaaggaaggatcagactttgcagagttgtgtgcagttggttta
tggacagacatctcgtcaagaattctcaaattgcccagtttggaaaccatgcatgtagaa
atgcttgggggagaaatcatcccacggtccattctgatgacaacatttgaaggtcagcac
tacacactgtgtgctcttggagatggttcactattctactttcagctagatgtagataca
ggttatttaagtgaaaggaagaaagtcattcttggaacacagccaactgttctgaagacc
ttcaagtccctttctaccactaatgtgtttgcgtgttcagacagacccacagttatttac
tccagtaatcataagttggtgttttccaatgtgaatttgaaagaagtcagcaatatgtgt
ccgctgaattcagaaggctatccagacagtttggctttggccatagatacaacactcatg
ataggcacaattgatgaaattcaaaaattgcacatccgcacggtgcctcttggagaatca
ccacaccgcatatcatatcaggaagcatcgcaaacttttggtgtcataaccacgcgaacc
gaaatcaaagatggttccggaacgactagcactgtgccaaacaggcaaagtgccagcaca
agtgcactgaattctacaagtagttctacgagagttgaacagagttcatcatcagagggc
gctagttttggggatgaggtggagatccattcattactcatcatagatcagcacacattt
gaagtcctacattctcatcattttatgccatttgagtatgcaacaagtattttgtcatgt
aaactcggtactgatcccaacacatactacatagtaggcactgcaatggtatacccagag
gaggcagaacccaaaacaggcagaatcattgtgtttcattacagtgatggtaaacttcaa
gaagtaactgaaaaagaaaacaaaggtgccacatactcactggtggaattcaacggcaaa
ctactcgcttcagtcaacagtattgtgaagttgtttgaatggactccagagaaagaactg
cgacctgaatgtagtcattacaacaacatcttagctttgtacttgaaaactaagggtgat
tttatcattgttggtgatcttatgcgctctattacattgctagcatacaaacctatggag
ggttgtttagaggagattgctcgggattacaatccaaactggatgtctgctgttgaaatc
cttgatgatgacacctttttaggagcagagaattctttcaacttattcacatgccaaaaa
gacagtgcggcgactactgatgaagagagacagcacctccaagaagttggtctatttcat
cttggtgaatttgtcaatgttatcagacatggttctttagttatgcaaaacataggagaa
agcagtattcccacaacaggcagtactctctatgggacagtcaatggctctgttggtttg
gtgactcagctgacagaagagttctacaagttcctgctggaagtgcaaaagaaactcaca
cgggtcatcaaaagtgttggcaagatagaacactcattttggcggtcattctacacagag
agaaaaaccgagtcggctgaaaacttcatagatggggatctgattgaaagtttcttggat
ctgaatagagacaagatggaagaggttgtccagggattacagattgatgatggtgggatg
aagagagatgccacagtgaatgatctgattaagattgtagaagaactgacgaggattcat
tag
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