Amphiura filiformis: 140155012
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Entry
140155012 CDS
T10871
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
afil Amphiura filiformis
Pathway
afil03030
DNA replication
afil03410
Base excision repair
afil03420
Nucleotide excision repair
afil03430
Mismatch repair
afil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140155012
03410 Base excision repair
140155012
03420 Nucleotide excision repair
140155012
03430 Mismatch repair
140155012
03440 Homologous recombination
140155012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afil03032
]
140155012
03400 DNA repair and recombination proteins [BR:
afil03400
]
140155012
Enzymes [BR:
afil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140155012
DNA replication proteins [BR:
afil03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
140155012
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
140155012
MMR (mismatch excision repair)
DNA polymerase delta complex
140155012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
140155012
NCBI-ProteinID:
XP_072033784
LinkDB
All DBs
Position
6
Genome browser
AA seq
1091 aa
AA seq
DB search
MDTAKRKPQPATGPKSKRPRNNPDDDVDPSAFEEELAMLEQVEAELSQDSEWTQPTGKTA
KNPKWARPKVPSINPANDTLVFQQIDLEHYIGKHLPGMPGATTGPVPIVRMFGITMEGNS
VLCHVHGFTPYFYVPAPHDFKQEHCEKFRDGLNKLVLADMKSNRDSVTTAVLAIDVVIKE
NLYGYHGMKSIPFLKITVAYPKLIAPCKRLLEQGISVPPYPAQGFQSYESNIDFEIRFMV
DTDVVGCNWIELPAGKYQLRKLSGGANAPTSLCQIELDIAWDAFISHSTEGKWEKMAPFR
ILSYDIECAGRKGVFPEADKDPVIQIANMVIRQGERDPFIRNVFTLNTCAPIVGSHVLPF
KKESDLLQAWSDFIREVDPDIITGYNIQNFDNPYLMNRASALKVNKFPYLSRLKDVRSVV
KDQSFQSKQLGKRENKYVNMDGRVQFDLLQVLVRDYKLRSYRLNAVSYHFLQEQKEDVHH
SIITDLQNGNDQTRRRLAVYCLKDAYLPIRLLDKLMSIINYMEMARVTGVPLSYLLSRGQ
QIKVVSQLLRKAKTQDLVMPAQKVDTGDDYTGGYVIDPIKGYYDTPIATLDFSSLYPSIM
QAHNLCYTTLLSPTMRDTLDPDQYIKTPSGNYFVKATLRRGLLPEILEDLLTARKRAKAD
LKKETDPLRKKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTAFGRLMIEQTRQ
LVEDKYSIANGFKHNAQVIYGDTDSVMVRFGVATVAESMELGKEAADHISTTFAKPIKLE
FEKVYFPYLLINKKRYAGLYFTKADTYDKMDCKGIETVRRDNCQLAANLVSACLQKILID
RDPNGAVEHAKQTISDLLCNRVDISQLVITKELTKTGEEYAAKQAHVELAARMRKRDAGS
APALGDRVPYVIIAGAKGCAAYEKSEDPIYVLENNIPIDTKYYLDQQLKNPLLRIFEPVL
GEQKVESILFKGEHTRMKTIVHSKIGGLAAFTKKRSTCIGCKTTLPKENMAVCKHCKPVE
TELYQKEIIHLSALEEKFNRLWTQCQRCQGSLHEDILCTSRDCPIFYMRKKVQKDLADQD
AIIHRFGQPVW
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggacactgcaaaacgtaaaccacagcctgcaacagggccaaaatcaaagcgcccccgt
aacaatcctgatgatgatgtggacccatctgcctttgaagaggaattggcaatgttagaa
caagttgaagcggaattgagtcaagattcagaatggactcaacccacaggtaaaacagca
aagaatccaaagtgggccagacccaaggtgccatcaataaaccctgccaatgataccctt
gtgttccagcagattgatttagagcattacattggcaagcatctccctggcatgccagga
gcaactacaggtcctgtgccaatagtccgcatgtttggcatcactatggaaggcaatagt
gtcctgtgtcatgttcatgggtttacaccctacttttatgttccagcacctcatgatttt
aaacaggagcactgtgaaaaattccgagatggactaaacaagctggtccttgccgacatg
aaatccaatagagatagtgtgacgacagctgtgctggcaatagatgtggtcatcaaagaa
aatttgtatggttaccatggcatgaagagtatcccatttctgaagatcacagtggcatat
cccaagctgatagcaccatgtaagagattgttagagcaaggcatctcagtaccaccatat
ccagcccaaggatttcaaagttatgaaagtaacattgattttgaaatcagatttatggtg
gacactgacgttgtaggatgcaactggattgagttgcctgctggcaagtatcaactacgc
aagctgagtgggggagcaaatgcacctacctcgctatgccagatagaattggacatagct
tgggatgcatttattagtcattccactgaaggaaaatgggagaagatggcgccatttcgt
attcttagctatgacatagaatgtgctggaaggaaaggtgtatttccggaggcagacaaa
gatccagtcatccaaattgcaaacatggtgatcagacaaggagagagagatccgtttata
cgtaatgtgtttacattgaacacatgcgctccaatcgtagggtcacatgtactgcctttt
aaaaaggaatctgatttactacaggcttggagtgatttcatccgagaggttgacccagac
atcataactggttacaacatccagaattttgacaatccatatctgatgaatcgtgccagc
gccctcaaggttaacaaattcccctacctgtctcgtctgaaggatgttcgcagcgtggta
aaggaccagtcattccagtctaaacagcttggaaagagggaaaataagtatgtgaacatg
gatggcagggtgcagtttgatttgttacaggttttggtgcgcgactacaaactgagatcc
taccggttgaatgcagtgagttatcattttcttcaagaacaaaaggaggatgtacatcac
tctatcattacagatctacagaatggcaatgaccagacaaggagacgtttggctgtgtac
tgcctgaaggatgcatacctacccatacgactcttagataagcttatgagtatcatcaat
tacatggaaatggctcgtgtcacaggagtaccactgtcatatttgctctccagaggtcaa
cagattaaggttgtctcacaactactcagaaaggctaagacacaagacttggtaatgcca
gcacagaaagttgatactggggatgactacactggaggctatgttattgacccaatcaaa
ggttattatgacacaccaatagctactctggatttctcctcgctatatccatccattatg
caagcacacaatctatgttacactacactgctgtcaccaacaatgagagacactctcgat
ccggatcaatatattaagaccccatcaggcaattactttgtcaaagcgacgctcagaaga
ggacttctgccagaaattctggaagatttgttaactgcaagaaaaagggccaaagctgac
ctgaagaaagagactgatcccttgcggaaaaaagtgcttgatggacgtcagttagcgctt
aaagtgagcgctaattcagtgtatggattcactggggcacaggttggcaaattgccttgc
ctagaaatatcacagagtgttactgcttttggccgcttgatgatagagcaaacccgtcaa
ctagtagaagacaagtactcaatagctaatggctttaaacataatgcacaggtcatatat
ggagatactgattctgtcatggtgaggtttggagttgcaactgtagcagaaagtatggaa
ctcggtaaagaagctgcagatcatatttctactacatttgccaagccaatcaagttggaa
tttgaaaaggtgtatttcccataccttcttatcaacaagaagcgatatgctggcctgtac
ttcaccaaagcagatacatacgacaaaatggactgcaaagggattgaaacggtccgacga
gataactgtcaactagctgctaaccttgtcagtgcttgcttacagaagatccttatagat
agagacccaaatggtgcagtggaacatgccaagcaaacaatatctgatctgctatgtaat
cgtgtagatatatcacagttggttatcaccaaggagcttaccaagactggagaggagtat
gccgccaaacaagcccatgttgagcttgctgcaaggatgaggaagagagatgccggtagc
gctccagctctaggagaccgagtgccttatgtaatcatagctggtgccaaaggatgtgct
gcttatgagaagtcagaggatcccatttacgtgttagagaacaacattcccatagataca
aagtattacttagatcaacaactgaagaacccactcttaagaatatttgagccagtgctg
ggtgagcagaaagtggaatctatattattcaagggtgagcacacacgcatgaagaccata
gtgcattctaagattggtggtctggcagctttcaccaagaaacgtagtacgtgcattggc
tgcaagacgacgctacccaaagagaacatggctgtgtgcaagcactgcaaacctgtagaa
acagagctataccagaaagagattatacaccttagtgccctagaagagaaattcaaccga
ctgtggactcaatgtcaacgttgtcagggtagtcttcatgaagatatattgtgtacaagt
cgtgattgtccaatattctatatgagaaagaaagtacagaaggatttagcagatcaagat
gccattatacatcgttttggacagccagtatggtga
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