Amphiura filiformis: 140155026
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Entry
140155026 CDS
T10871
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140155026
09123 Folding, sorting and degradation
03018 RNA degradation
140155026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140155026
03041 Spliceosome [BR:
afil03041
]
140155026
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140155026
mRNA degradation factors
5'-3' decay
Lsm complex
140155026
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140155026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
140155026
NCBI-ProteinID:
XP_072033840
LinkDB
All DBs
Position
1:complement(12130106..12142619)
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AA seq
107 aa
AA seq
DB search
MAQQQHQQGERKKKESILDLSKFIDKPIRVKFQGGREVTGVLKGYDPLLNLVLDGTAEFV
RDPDDPFKLTDDTRSLGLAVCRGTSVVLICPADGMEPIANPFVAQEA
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacaacaacatcaacaaggtgaaaggaagaagaaggagagcattttggatttg
tccaagttcattgacaaaccaatcagggtgaagtttcaagggggaagagaagttactggt
gttttgaaaggttatgatccattgctgaacttggtacttgatggcacagcagaatttgtt
agagatccagacgatccatttaaactcacagatgacaccaggagtcttggtttagcagta
tgccggggaacatcagtggtccttatatgtcctgcagatggtatggaacctatcgctaat
ccatttgtagcacaagaagcctag
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