Amphiura filiformis: 140155112
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Entry
140155112 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afil01001
]
140155112
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140155112
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140155112
Protein kinases [BR:
afil01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
140155112
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140155112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Prok-RING_4
DUF6602
Motif
Other DBs
NCBI-GeneID:
140155112
NCBI-ProteinID:
XP_072033916
LinkDB
All DBs
Position
6
Genome browser
AA seq
923 aa
AA seq
DB search
MASENTDPPASEPEVVQVQEEKPAEDLGGLFSPFCRVCNNELASREPKLMPCLHTVCKQC
VDNLTNRENKTARCPICRQECRNLDDIIDNNFMMGKPIPVSAEATTSSENAVCTNCDDNA
TVSAWCQDCQEWLCEDCVKAHHRVRVTKDHVIRSKEEVDAPDSGAAQPEALRSDIKFFCR
IHKQEPLKLYCETCDKLTCRDCQLLEHKEHRYQFISEAAIRQKAAMKVLLNKLQEKHSYV
IQTRKHIRDKKLELIKNEQKVTQEIKTLVYKLVTEINNRGKRLITELSTACEARRKVFDQ
QMQEIERLERTIQHCYKFTEQAAASDNDSALLCSRKLIVQQLVLLLRTMCTRQPVAGLDI
RFLRNEQNMMNLVGRLGMLVIRDPLNKNNPSQQAAAAAAAQALAAAQGRSGMQNLSPSQQ
QAIIKEQQQRINLHQLMMRRQNSESGNVQQANGPQMYLQAAPQMDGTQVLRHINGPQIRP
TNGPQGGPTFTSRASSYTSSPNSGMIQLSPTPPNQVLVRPVSHPNMIPPSSQHGPRPSSI
PQMMMQRTGSGEIILSGSSTPSSPPIISPPSDVEVIKVKDEPKTPMDERPSCSMAGRLIP
GLEGDRQKTTGSVHSEPHQRPTSIPTSEGGGSTKSEGAQPQDKSNPNSAKQEPLPIQISC
VFGGTNGTNETGGKGEHQMALYNTYEPVNQDPNEDWCACCHNGGELLCCDSCPRVYHLNC
HIPVLTATPTDSDAWCCTMCVDLENDPAEASSDNGNERKRRVSSGLTNVERKKCEKIGLE
IFCLDQSVPFHKPVSKAHVPDYYKVVSQPMQLSTIKSKLQPVHFNHYQNVEEFVTDMRLM
FSNCYLYNGEMSEMGKIGKAVEEHFNQLLQKYFPNDQYHLQTGRVTLLLSDSERSDASTS
EERPPQNKRKRKPEDIMHYPPQQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagaaaacacagatccaccggcaagtgaacctgaagtcgtccaggttcaagag
gaaaaaccagcagaagatttaggtggtttattcagtcctttctgtcgggtgtgcaacaat
gaactggccagccgggaacctaaactcatgccatgcctacacactgtgtgtaaacaatgc
gtggacaaccttaccaaccgcgaaaataaaactgcgcgctgccccatttgtcgtcaagag
tgtcggaatcttgatgacatcatcgataacaacttcatgatgggcaagccaatcccggta
tctgcagaagcaaccaccagtagcgaaaatgccgtatgtaccaattgcgacgacaacgcc
acggtatccgcatggtgtcaagactgccaggaatggttatgtgaggactgtgtgaaagcc
caccaccgtgtcagggttaccaaggaccatgtgattcgttccaaagaagaggtggatgca
cctgatagtggggctgctcagccagaggcccttcgaagtgatatcaagtttttctgcagg
attcacaagcaagagcctttgaagctatattgtgaaacatgtgacaagttgacatgcagg
gattgtcaactactggaacacaaagaacacaggtatcaattcatctcagaagctgctata
agacagaaggctgcaatgaaagtactgctaaacaaactgcaagagaaacacagctatgtc
atccagacacgcaaacatatcagggataagaagctggaattgatcaaaaatgaacagaaa
gtcacgcaggaaatcaagaccctggtctacaaactggttacagaaatcaacaacagaggc
aagcgactgataacagaattgtccacagcttgcgaagcaagacgtaaagtctttgatcaa
cagatgcaggaaattgagcgcctagaacgaaccattcagcattgctataaattcaccgag
caagccgctgcatcagataacgactctgctcttctctgtagccgtaaactcatagtccaa
caactggttttgttattaagaacaatgtgtactagacagcccgtagcaggccttgacata
cgtttcttgagaaacgaacagaacatgatgaatttggtaggacgtcttggcatgcttgtc
atccgagatccgttaaataagaacaatccgagtcagcaggctgctgctgcagcagctgcg
caggcactcgctgcggctcaagggagatctggaatgcagaatttgagccctagtcaacaa
caggctataattaaagaacagcaacagagaatcaatctccatcagctgatgatgaggcgg
caaaatagtgaaagtggaaatgtgcaacaggcaaatggtccacaaatgtacttacaagcg
gctcctcagatggatggaacacaagtactgaggcatataaatggtcctcagataaggcct
acaaatgggccacaaggaggaccaacattcacgagtcgtgcatcctcatataccagttcg
cctaattcaggcatgattcagttatcaccaacaccaccaaatcaggtccttgtacgtccg
gtatcccaccccaatatgataccaccttccagtcagcatgggccacgcccgtctagtata
ccgcaaatgatgatgcagagaacagggtctggagaaatcatcttaagtggaagttctact
cccagttcaccacccattataagcccaccaagtgatgtagaggtgattaaggtgaaagat
gaaccaaagacaccaatggatgagaggccaagttgtagcatggcaggtcggcttattcct
ggtttagagggtgatcgacagaaaactactggctcagttcatagcgagccccatcaaaga
cccacttcgataccaaccagtgagggtggtggtagtaccaagagtgagggagcacagcct
caggataaatctaatcctaatagtgctaaacaagaaccactgcctatccaaatatcatgt
gtgtttggagggacaaatggcaccaatgaaactggaggcaaaggtgaacaccagatggcg
ctgtacaatacctacgagcctgtgaaccaggatcccaatgaagattggtgtgcctgttgt
cataatggaggagaactgttatgctgtgacagctgcccaagggtctatcacttgaactgc
catataccagtgctaactgctactccaactgacagtgatgcatggtgttgtacgatgtgt
gttgatcttgagaatgatcctgctgaggcttcatctgataatggcaatgaaaggaagaga
agagttagctcaggcttgactaacgtggaaagaaagaaatgtgagaagatagggctagag
atattctgtcttgaccagagtgtaccattccacaaacctgttagtaaagcacatgtgccc
gattactataaagtggtatctcaaccaatgcaactgtcgacaatcaaatccaaactgcaa
ccagtgcatttcaaccactatcagaatgtagaagaatttgttactgatatgagactcatg
ttcagcaattgttatctctataatggggaaatgtcagaaatgggtaaaattggcaaggcg
gtggaagagcatttcaaccagctattgcagaaatactttccaaacgatcaataccaccta
cagaccggtagggtcactctcttactctcggactcggaaagatctgatgccagtacctca
gaagagcgccctcctcaaaataaacgaaagcgaaagcctgaggatataatgcactatcca
cctcaacagtaa
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