Amphiura filiformis: 140155406
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Entry
140155406 CDS
T10871
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
afil Amphiura filiformis
Pathway
afil03082
ATP-dependent chromatin remodeling
afil03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140155406
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140155406
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afil01009
]
140155406
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140155406
03036 Chromosome and associated proteins [BR:
afil03036
]
140155406
Protein phosphatases and associated proteins [BR:
afil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140155406
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140155406
SWI/SNF complex
140155406
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140155406
PBAF complex
140155406
SWI/SNF complex
140155406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
TdIF1_2nd
Motif
Other DBs
NCBI-GeneID:
140155406
NCBI-ProteinID:
XP_072034351
LinkDB
All DBs
Position
6:39035358..39046474
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AA seq
376 aa
AA seq
DB search
MGDKSGGCLRTFGKKPDVFVFEENGDRYMIGSEVGNYLRMFRGSLYKKYPSLWRKLASME
ERKAIVEQGERFGQHGLATNVTLLRAAEVEDMLEGNDEKYKAVAINTDTVIRETKPKRRG
DWVPAIPNSSHHLDAVPCSTQISRTRIGTKRQRTFPMCYDDHDPAVIHENASHSDTLVPI
RLDMEIEGQKLRDTFTWNKNENLITPEMFAEILCEDLDLPPLAFVPAISQAIRTQIEAYP
TDASILEGQSDQRVILKLNIHVGNISLVDQFEWDMATNNSPEEFAIQLCADLGLGGEFIT
AIAYSIRGQLSWHQRTYAFSESPLPQVEIAVRNQGEADQWCPFLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPNW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaaagcggaggatgtttgcggacatttggcaagaaaccagatgtttttgtg
ttcgaagaaaatggagatcgttatatgatcggttcagaggtgggtaattacctgcgtatg
ttcagaggatccctgtacaagaaatatccatcactatggagaaaattggcatccatggag
gagcgcaaagccattgtggagcagggagaaagatttggccaacatggcttagctaccaat
gtaacactcttacgagctgcggaggttgaagacatgctggaaggcaatgatgagaagtac
aaagctgttgccattaacacagacactgtgatccgtgagacgaaacccaagagaagaggt
gattgggttccggctatccctaatagctcacatcatctggatgcagtaccgtgttccaca
cagatctcacggacaagaattgggactaagagacagaggacattccctatgtgctatgat
gaccatgatcctgctgtgatccatgagaatgcttcacattcagacactctcgtcccaatc
cgtcttgacatggaaattgaagggcagaaactaagagataccttcacctggaataaaaat
gaaaatctaatcacacctgagatgtttgctgagattctgtgtgaggatcttgacctgcca
ccgctggcatttgtgccggcaatctcacaagccatccgcacacagatagaggcatatcca
acagatgctagtatactagaaggacaatcggatcaaagggttatactcaagcttaatatc
catgtgggtaacatttctctggtggatcagtttgagtgggatatggcaaccaataacagc
ccagaggaatttgccatccaattatgtgcagatctgggattaggtggggaatttatcaca
gctattgcatacagtattagaggacaactcagctggcaccagagaacgtatgcatttagt
gaatcaccattgccccaagtagagatagccgtcaggaatcaaggagaagctgatcagtgg
tgtccatttctagaaacactaactgatgctgagatggagaagaagatcagggaccaggat
agaaatacaaggcgtatgcgacgtttggccaacacagctccaaactggtaa
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integrated database retrieval system
