Amphiura filiformis: 140155696
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Entry
140155696 CDS
T10871
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
afil Amphiura filiformis
Pathway
afil03030
DNA replication
afil03410
Base excision repair
afil03420
Nucleotide excision repair
afil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140155696
03410 Base excision repair
140155696
03420 Nucleotide excision repair
140155696
03430 Mismatch repair
140155696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afil03032
]
140155696
03036 Chromosome and associated proteins [BR:
afil03036
]
140155696
03400 DNA repair and recombination proteins [BR:
afil03400
]
140155696
DNA replication proteins [BR:
afil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140155696
DNA Replication Termination Factors
ELG1-RFC complex
140155696
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140155696
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140155696
Check point factors
HRAD17(Rad24)-RFC complex
140155696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_assoc_2
Rad17
AAA_22
AAA_16
AAA_30
AAA_11
AAA_lid_RFC1
AAA_2
DUF815
AAA_24
RuvB_N
Mg_chelatase
ResIII
AAA_19
AAA_14
SLFN-g3_helicase
AAA_5
DNAX_ATPase_lid
MCM
ATPase_2
AAA_7
bpMoxR
Motif
Other DBs
NCBI-GeneID:
140155696
NCBI-ProteinID:
XP_072034729
LinkDB
All DBs
Position
6
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGGSGKTKDKSGPSGDAAKKIEKLVPWVEKYRPRSVDEVAYQEEVVSVLRKSIEG
ADLPNMLFYGPPGTGKTSTILAAARELYGSDLFRSRVLELNASDERGIQVVRDKVKGFSQ
QAAGGKRSDGRPCPPYKIVILDEADSMTKDAQAALRRTMEKQTKTTRFCLICNYVSRIIE
PLTSRCAKFRFKPLANDVQEQRVRLVMGKENVKCDDEAVQAIIKTSEGDLRKAITTLQSA
HRLKGEEGIQVKDIYEIAGVIPDDYVATILKTCSSNSYEQLEVAVKDLLREGYSAMQVIS
QVNDIIVEKPELNDKQKSLICERLAIADKRLCDGADEYLQIMDLFTIVMTQFCSS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttctaaaaggaggcagtggaaaaaccaaagacaaatcaggaccctcagga
gatgcagccaaaaaaattgaaaaacttgtaccatgggtggaaaaataccgcccgaggtca
gtagatgaagtagcataccaggaggaagtagtttctgttcttaggaaatcaatagaggga
gcagatttaccaaacatgctgttttatggcccaccaggaactggcaaaacatccactatc
ttggctgcagctagagaactctatgggtctgatctgtttcgttctcgagtactggagttg
aatgcatcagatgagcgtggtatccaggtggtaagagacaaagtgaagggcttctctcag
caagcagcaggaggaaagagatcagatggacgaccatgtccgccatataaaatagtgata
ttggatgaggcagattcaatgacaaaagatgcccaggctgccctgagacgcacaatggag
aaacagacaaaaacaacacggttctgtctgatatgtaactatgtcagccgaataattgaa
cctttaacttctcgttgcgcaaaattccgattcaagccactcgcaaatgatgtgcaggag
cagagagtgcggctggtaatggggaaagaaaacgtaaaatgcgatgatgaggcagtacag
gctatcatcaagacatcagaaggtgacctgcgtaaggctattacaacattacaaagtgca
cacagactcaaaggtgaagaaggaatccaagtcaaggatatatatgaaatagcaggggta
ataccagatgactacgtggctaccattttgaaaacttgttccagtaattcttatgaacaa
cttgaggttgctgttaaggatttgttgagagaagggtattcagccatgcaggtgatatca
caagtcaatgacatcattgtagagaaaccagagctgaacgacaaacagaaatccttgatt
tgtgagcggcttgctattgctgacaagaggttatgtgatggagctgatgaatatctgcag
ataatggatctgtttactattgttatgacacagttttgttcttcataa
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