KEGG   Amphiura filiformis: 140155778
Entry
140155778         CDS       T10871                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
afil  Amphiura filiformis
Pathway
afil03420  Nucleotide excision repair
afil04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140155778
  09124 Replication and repair
   03420 Nucleotide excision repair
    140155778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afil04121]
    140155778
   03400 DNA repair and recombination proteins [BR:afil03400]
    140155778
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afil04147]
    140155778
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     140155778
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      140155778
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      140155778
Exosome [BR:afil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   140155778
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 140155778
NCBI-ProteinID: XP_072034840
LinkDB
Position
6:complement(62534824..62563005)
AA seq 807 aa
MPLTSAEKKSALKTSSDRSSRKRRPSENNHHHSERKRSKADSDTDSSCGGQKMGEATPKR
ANFSALSPPNNGFTSRASPLANNKPSSSKKLVIKNFKARPELPENYQEQTWERLEEAVQA
IHTSRPIKYSLEELYQAVENMCSHKMSAPLYDKLKVVCEEHIRVQIGQFTGEMTDSLSYL
KLLNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSLVSSLWDMGLDLFRTHIISNRTVQTRT
VDGLLQLVESERGGDVVDHSLLKSLLRMLSDLQIYEDAFEKRFLEATDRLYAAEGRKLMH
ERDVPEFLAHVDRRLEEESQRILHYLDHTTRKPLIACVEKQLLEVHIGNILQKGLDSLLD
ADRRSDLTLLYSLFMRTKSGLFELCQYFSAYIKKTGTIIVINPEKDKTMVQELLDFKDKM
DNILVQCFGSNDRFFNTLKEAFENFINKRLNKPAELVAKYVDNKLRAGNKEATEEELERL
LDKIMVIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGAFTSKLE
GMFKDMELSKDIMIAFKQHVQHQNVPGNIDLTVNILTMGYWPTYAPMDVHLPLEMVKLQE
VFKTFYLGKHSGRKLQWQPNLGHCVVKAQFKGVVKELQVSLFQTLCLLLFNEQDEVTYDE
IVQATAIEDSELRRTLQSLACGKARVVQKIPKSRDVEDGDKFVFNEDFKNKLFRIKINQI
QMKETMEEQVSTQERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSELYNQLKFPVKPSDL
KKRIESLIDRDYMERDKDNSNEYHYIA
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgcctctcacaagtgctgaaaagaaatctgctctcaaaacaagttctgatcgttcgtca
aggaagcgtagaccctcagaaaataatcatcatcactcggaaagaaaacgatcgaaagcc
gattctgacacggacagctcatgtggtggtcaaaaaatgggtgaagcaacaccaaaacgg
gcaaatttttctgccctcagccctcctaataatggttttaccagcagagcatctcctcta
gctaacaacaagcccagtagctcaaagaagcttgtgataaagaatttcaaagctcggcct
gagctaccagagaattatcaagagcagacatgggagcgtttagaggaagctgtgcaagct
attcataccagcagacctatcaaatacagcttagaggaactataccaggcagtagagaac
atgtgttcacacaagatgtcagcaccattatatgataaactcaaagtggtctgtgaagag
cacatacgtgtacagattggccagttcactggtgaaatgacagatagtttatcttactta
aaactgctgaatacatgctggcaggatcactgtagacaaatgattatgatcagaagtata
ttcttattcctagacagaacatacgtccttcaaaattcactagtttcatcattatgggac
atgggcttagatttattccgtacacacatcatcagtaacagaacagttcagacaagaaca
gtagatggtctgctgcaattggttgaaagtgaacgtggtggtgatgtggttgaccatagc
ctgctcaaaagcttgctcagaatgctctcagatctgcagatatatgaagatgcttttgag
aaaaggtttttggaggcaacagacagactgtatgctgcagaaggaaggaaacttatgcat
gaacgtgatgttcctgaattccttgctcatgtagatagaagactagaggaggaatcacag
agaattcttcattatttagaccacacaacaaggaaaccactcatagcttgtgttgagaag
cagctactggaagttcatattggaaatattcttcagaaaggcttggatagtctactagat
gcagatagaagatcagatctcacccttctttatagtttgttcatgagaaccaagtcaggt
ctctttgaactctgtcagtacttcagtgcctatattaagaaaaccggcacaattattgtt
atcaacccagaaaaagacaagacaatggtgcaggaactactagacttcaaagacaaaatg
gataatattttggtgcagtgttttggtagcaatgacaggttcttcaacacattgaaagaa
gcatttgagaatttcatcaacaagagactgaataaacctgccgagcttgttgccaagtat
gttgacaataaactaagggccggcaacaaagaggccactgaggaggaactagaaaggcta
ctggacaaaatcatggttatattcagatttattcatggcaaagatgtgtttgaggctttc
tacaagaaggatctggctaagagattgcttgtcggcaagagtgcctcagtagatgctgag
aagtctatgctatccaaattaaaacaagagtgtggtggtgcctttaccagcaaattagaa
ggaatgttcaaagacatggaattatccaaagatatcatgatagctttcaaacagcacgta
cagcaccagaatgtgcctgggaatatagatctgactgtgaatattttaacgatgggttac
tggcctacctatgcacctatggatgtacatctaccactagagatggtgaaattacaagaa
gtatttaagactttctatctaggcaagcatagtggaaggaaactacagtggcaacccaac
ttgggacactgtgtcgttaaggctcagtttaaaggggttgtgaaggagcttcaggtgtca
ttgtttcagaccttgtgtctgttgttattcaatgagcaagatgaggttacatatgatgaa
atagtacaagcaactgccatagaggacagtgaattgaggagaacattgcaatcattagca
tgtggtaaagccagggtcgtacagaaaattccaaagagtcgagatgtagaagatggtgac
aaatttgtgttcaatgaagacttcaaaaacaagttgttccgcatcaagatcaatcagata
caaatgaaagagacaatggaagaacaggtcagcacgcaagaacgtgtcttccaagatcgc
cagtaccaaattgatgctgctattgtacgcatcatgaaaatgcgcaagacattgagtcat
aacctgttggtatcggagctctataaccagctcaagtttcctgtcaagccatcggatttg
aagaaacgtattgagagtctgatagacagagactatatggaacgagacaaagacaattct
aatgaatatcactatatagcataa

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