Amphiura filiformis: 140155915
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Entry
140155915 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein FXR1-like
KO
K15516
fragile X mental retardation protein
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140155915
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140155915
Factors involved in mRNA localization
Other mRNA localization factors
140155915
mRNA cycle factors
Stress granule specific factors
140155915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
Agenet
FXMRP1_C_core
Tudor_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
140155915
NCBI-ProteinID:
XP_072035035
LinkDB
All DBs
Position
6:68765641..68821867
Genome browser
AA seq
739 aa
AA seq
DB search
MEDLSVEVRDTNGAFYKATIKVIHDEEVTVEFEENWAPERRVPFALVRLPTDNNDDPVDL
QAGDEVEVYSRAAEGEPCGWWNAKIQMVKGEFFVITYVGYDNTYNEIVQGDRLRPRNKNP
CLSNNTFFRASIQMPNDLGSYCKNTSWHSEFVKASGAQAALYNEETQSLIVLCPSRNTVR
RVEMLGDMHIRNIREKVLMLNRAEEAAQQLEVTKQQLEGCVDEFAVREDLMGLAIGAHGA
NIQNARRVEGVKRIDLDENTCTFRIYGDNAAAVQEARNMLEFGEDSCDVPRNLIGKVIGK
NGRVIQEIVDKSGVVRVKIKGDSERDDDFDDSVVPFLFVGTKESIANAQVLLEYHLSHLK
DMDKLRMQRLQIDEQLRSYGTGYVQGPYFPPPRERKERGYGSDYSEDSSSTGGSRGRGRG
GFRGRGSSRGRYRGDSGASGEEGVSSGTWAEQSDREGANRGPPSRGGFRGRGRGRGGRGG
RGGRGRGMPFGRDGRTATPPSETDEDTYLDNRRRRHDDEDTILEDNTTLDEDSNNMDRDD
QSGRRNRRRNRRRRPRGGRGGGLSGDESLREADDTDTSKTGSPQPRRRVSGKPSPLTMQS
SNGGGEITGAAARNDTKTDSRGPSNRNEGRGPASKNGAPSVATNGKNERATNSSTKPVAS
NKDNKPTVPVSHKPPSGASVIKEQRDPRPPRNHKPPMVNHKGTNGNAVGNDNERVKTKAK
VNGGGAETKEPTKLVNGTM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttatctgtagaagttcgggataccaacggagcgttttacaaggcaacaata
aaagttattcatgatgaagaagtaactgttgaatttgaagaaaactgggctcctgagcgc
cgggtcccatttgcattagtgcgtcttcctactgataacaatgatgacccagtagatcta
caagcaggagatgaagttgaggtttattctagggcggcagaaggtgagccatgtggctgg
tggaatgccaagattcagatggttaaaggagagttctttgtcataacatatgtaggatac
gataacacatacaatgaaattgttcaaggagatagactacggccaagaaacaaaaaccca
tgtttatcaaacaacacatttttcagggcaagcattcaaatgccgaatgacttaggcagt
tattgtaaaaatacatcatggcatagtgaatttgtgaaagcatccggtgcgcaagctgca
ctgtataatgaagaaacgcagtcattaattgtcttgtgtccctcaagaaacacagtacgt
agagtagagatgctgggtgacatgcatatacgtaacatccgagaaaaggtccttatgtta
aatagagctgaggaagctgcccaacaactagaggtaaccaagcaacaactagaaggttgt
gtagatgagtttgcagtacgtgaagacctgatgggtttagcaatcggagcacatggagca
aacatccagaatgccaggagagtggaaggtgtcaaaagaattgacctggatgagaacact
tgtacctttaggatttatggggataatgctgcagcagtgcaggaagctcgtaatatgtta
gaatttggtgaagactcctgtgatgtacctaggaatcttataggtaaagttataggcaag
aatggcagagtgatacaagaaatagtggacaaatctggtgtagtgcgggtgaagattaaa
ggagatagcgagagagatgatgactttgatgacagtgttgtgccattcttatttgtagga
accaaggagagcattgccaatgctcaagttttattggaatatcatttgtcacatctcaag
gatatggacaagctacgtatgcaaaggctacaaatagatgagcaactcaggagctatggg
actgggtatgtgcaaggtccatatttcccaccacccagagaacgcaaggagagaggctat
gggtcagactactcagaagacagcagcagtacgggaggaagccgtgggaggggaaggggt
ggatttagaggaaggggaagctcaagaggaagatatagaggagattctggtgcatcagga
gaggaaggtgtttccagtggtacatgggcagagcaatcggacagagaaggagcaaataga
ggccctccatctaggggaggatttaggggaagaggaagaggacgaggtggcagaggagga
cgtggaggaagaggcagaggcatgccttttggcagggatggcagaacagcaactccaccg
tcagaaactgatgaggatacgtatctagacaaccgtcgccgcagacatgatgatgaggac
accatattagaagataatactacattagatgaagattcaaacaatatggatagagatgat
caatcaggcagaagaaaccggcggcgcaacagaaggcgtagaccacgaggagggcgtggt
ggtggtctatcaggtgatgaatcattacgagaggcagatgacaccgataccagtaaaact
ggttcacctcagccacgccgcagagtaagtgggaagccaagcccattaacaatgcaatca
tctaatggaggaggtgagataactggagcggctgctaggaatgatacaaaaactgatagc
aggggaccttctaatagaaacgaaggtcgtgggcccgcctccaaaaatggagcgccctca
gtggctactaatggtaagaatgaaagagccacaaactctagtacaaagcctgtagctagt
aacaaagacaataaaccaacagtgcctgtaagtcataagcccccatcgggggcaagtgtt
atcaaggagcagagggatccacggcctccgaggaaccataagccacctatggtgaatcac
aaaggaacaaatggtaatgcagtgggaaatgacaacgagagagtgaaaacaaaagcaaaa
gtaaacggaggtggagctgagaccaaagagcccacaaaattagtcaatggtacaatgtaa
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