Amphiura filiformis: 140155986
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Entry
140155986 CDS
T10871
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
afil Amphiura filiformis
Pathway
afil04120
Ubiquitin mediated proteolysis
afil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140155986
04120 Ubiquitin mediated proteolysis
140155986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140155986
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140155986
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
U-box type E3
140155986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
140155986
NCBI-ProteinID:
XP_072035141
LinkDB
All DBs
Position
1:87265129..87307816
Genome browser
AA seq
1147 aa
AA seq
DB search
MSELTPDEIRRRRLARLDKSPSPNPLTTTGNESEKAGASNSSSGSPSLTVPSAKRTLAEN
IEESSQPEPATATPTQEIQDVADGSQSQPSMEVESGASLDSGYPQSMEMECCEQSTLTQM
DVDSGIENPEVEDPEQRVKGQVAQKEFCGISEDQLLHAASSIFHVSWKEQGSGVVYLTGL
AAEFGEEPEEVFCNLEDLVNQIIMEVLIQHSTSGNPFAVLPASPKPGTNPTEAGAAVGAA
AAASPSSSGKSKVASTSLNMLDASSVEGEMFKYLMECYERIGQEERSAPKRYSQPPMCDL
LSTARSQCVSHASLVLQGAFTQHSPCSNRSLLLAPIISHTMPRGFLQELVCVSYRDPEAF
AMIFNPLIMSLVQTVQRSTIDLQNVESAEVPLMAMTELCRIKCGPVRPICNLIIWSPYWQ
PSPILQAAGREVAKLSILGAFLNLSVFAEDDNKVVDKHFSGPTLTHDSIKLINDGLQHSL
QQIRNELYEIIHSILVNSDSREAMMSYLAMVIKQNHKRTQMQVDESLVAGDGFMLNLLIV
LQRLSQKIKLDKVDIMYPFHPKSRIDISQDTRVKASSQEATDWIEQLNKKSEWIEPKFPT
ECYFLTLHCQHLALLPACRHHARRIRGIRELTRMVDEMQGREAMWKGTPQERRNKQLLER
WKTQIKKLEKAKLCGDAGLLDENLLRGCFQFYGTAMALLIKLVTPKGLLTPTLPLPEDVP
MEFASLPEFYIEDIAEFILFIVQHFPQVLEDTAQQDMVLFILVFVCSGQYIHNPYLVAKL
VEVIFVMSPAVQNRTVKIYESLQLHPIALEHLVPALMKFYTDVEQTGASSEFYDKFSIRY
HISIIFKSLWQIPMHRDAVMKASGVGGEFVRFINMLMNDTTFLLDESIGCLRRIHEVQQA
MNNKDNWNSLSQEDMQSRTRQLNTDERQCRSYLTLANETLDMFNYLAQLTKTPFLRPELC
DRLAAMLNFNLQQLCGPKCNDLKVENREKYGFEPRKMLDQLTSIYINLDSEELAQSIGND
ERSFNRELFRNAETIMRSNAIKTQSEIGQFVALADKSHQISMRKRAQDLDLDDAPDEFKD
PLMATLMRDPVVLPSGHVMDRAIIDRHLLNSQTDPFNRQALTSDMLEPAPELKARIEEYI
RSKLHKS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttacgccagacgagatacgtcggaggcgattagctcgtctagacaaaagc
ccttctccaaacccactgaccacaacaggtaatgaatctgagaaggctggtgcaagtaat
tcttcatcaggatccccatctttaacagtgccatccgcaaagagaacacttgcagaaaac
attgaagaatcaagtcagcctgaaccagcaacagcaacgcctacacaagaaatacaagat
gttgctgatggaagtcaaagccagcccagtatggaggttgaaagtggtgccagcctggac
tctggctatccacaaagtatggaaatggaatgttgtgaacagagcacactaacccagatg
gatgttgactctggaattgagaacccagaggttgaagaccctgagcaaagagtaaaagga
caggttgctcaaaaggaattctgtggtataagcgaagatcaactcttacacgctgcaagt
agcatctttcatgtgtcatggaaggaacaaggtagcggtgtagtgtatctgactggtctt
gcagcagagtttggtgaagaaccagaagaagtgttttgcaaccttgaggacttagtaaat
cagataatcatggaggtattaatacaacactcgaccagtggcaacccatttgctgtatta
ccagcatcacctaaaccaggcacaaatcctacagaagcaggagcagcagtaggagcagca
gcagctgcaagtccctcatcaagtgggaaaagtaaggtggcatcgacctcactcaacatg
ttggatgcttccagtgtggaaggagagatgttcaaatatcttatggagtgttatgaaaga
ataggacaggaagaacgcagtgcaccaaagcgttatagtcagccacccatgtgtgatctg
ctatcgacagctcgtagccaatgtgttagccatgcttcattagtattacaaggagccttc
acacaacacagtccatgcagtaatagatcgctactgttagcacccattatatctcacaca
atgccacgagggtttctccaggaactagtgtgcgtgtcttacagggatcctgaggcattt
gcgatgatatttaatcctttaatcatgagtctggtgcaaaccgtacagagaagtaccata
gatttacagaatgttgaaagtgctgaagtaccattaatggcaatgactgaactgtgtaga
atcaagtgcggaccggtacgtcccatatgcaatttaatcatttggtcgccgtactggcaa
cccagcccaatcctgcaagctgccggaagggaggttgccaaattgtcaatccttggtgca
tttctcaatttatcagtatttgctgaagacgacaacaaggtggttgacaagcatttctca
gggccaactctgacacatgacagtatcaaactgattaacgatggtctgcagcattcctta
caacaaatcagaaatgaattgtatgagatcattcacagtattctggtgaatagtgacagt
cgtgaagccatgatgagttacctggctatggtcatcaaacagaatcacaaaagaacacaa
atgcaggttgatgaaagcttagttgcaggtgatggattcatgctgaatctattgattgtg
ctacaacggcttagtcagaaaattaaacttgacaaggttgacatcatgtacccattccat
ccaaaaagtcgcattgacatttcgcaagacacaagagtgaaagcatcatcccaggaggct
acagactggatagaacaactaaataagaaatcagaatggatagaacctaaattccccacc
gagtgctactttctgactttacactgtcagcatctggcattgctaccagcatgtagacac
catgcacgacgtatccgtggtatccgtgagctgacccggatggtggatgagatgcagggt
cgtgaagcaatgtggaaagggacaccacaggaaagaagaaacaaacaattactagagaga
tggaaaacacagattaagaaattagagaaggccaagttatgtggtgatgcagggttacta
gatgagaatctactgagaggctgcttccaattctatggtactgctatggcactcctcatc
aaactggtcacacccaaaggtctactaacaccaactctaccattaccagaagatgtgcca
atggaatttgcctctctgccagaattctacattgaagatattgcagagttcattctattc
atagtgcaacattttcctcaggtactggaagacacagcacaacaagatatggtgctcttc
attctagtttttgtatgcagtggacagtatatacacaatccataccttgtggctaagcta
gtagaggtgatctttgtgatgagtcctgctgtccagaatcgcacagtgaaaatatatgag
tctctacagctacatccgatagcactagaacacttggtgccagcacttatgaaattctat
acagatgttgaacaaacaggagccagtagtgagttttatgacaaattcagcatccgttat
catatcagtattatattcaaatctctatggcaaataccaatgcatagagatgcagtcatg
aaagcaagtggtgtgggaggtgagtttgttcgcttcattaacatgctaatgaatgacacc
acattcttgttagatgagagcatcggctgcctcagacgtatccatgaagtgcaacaagct
atgaataataaggacaattggaattctctctcacaggaagacatgcagagcagaacccga
caattaaacactgatgaacgacaatgccgctcctatctcacactagctaatgagactctg
gacatgtttaactatctagctcaactcacaaaaactcccttcttgagacctgagctttgt
gatagactagcagctatgctgaatttcaacttacagcagctctgtggaccaaagtgcaat
gacctcaaggttgaaaaccgggagaagtacgggtttgagccacgcaagatgcttgaccag
ctgacctctatatacattaatttggacagtgaagaattagctcagtccattggtaatgat
gagcgttctttcaaccgagagctcttcagaaatgccgagactataatgcgatccaatgca
atcaaaactcagtctgaaattggtcagtttgtagccttagctgataagtcccatcaaata
tctatgagaaaacgagcacaggatctagaccttgatgatgcacccgatgagttcaaagac
ccactcatggcaacattaatgagagaccctgttgtgctaccatctggtcatgtaatggat
agagccatcatagatcgtcatctattaaactcacagacagatccattcaacagacaagca
ttaaccagtgatatgttagagccagccccagaactgaaagccagaatagaggaatacatc
cgtagcaagcttcataaatcttaa
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