Amphiura filiformis: 140156330
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Entry
140156330 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140156330
04091 Lectins [BR:
afil04091
]
140156330
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140156330
Lectins [BR:
afil04091
]
C-Type lectins
Others
140156330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
PBP_N
Motif
Other DBs
NCBI-GeneID:
140156330
NCBI-ProteinID:
XP_072035408
LinkDB
All DBs
Position
1:complement(88035196..88062681)
Genome browser
AA seq
999 aa
AA seq
DB search
MEEKSPSWFLNRLMIKDLTHDRVYYFMLDKWLAVEEDDGSIERVIPVAGKSELTAFGHLF
YSKTRRNLSDAHLWFSVFARPAKSRFTRVQRATCCLSLLFTAMMSNIFFYNVDFVDPSAQ
QKVFKIGPIGFTMSEVVIGVIASLMVVPINLIIVQIFRITRPAPPSACGCCSKKKRHQDG
DAYEARKMTQTPKVDEEDELQRQLDLLEEEEMKQGPIPSVSLEVDNSSRTNSTQSLPREN
RNNSTATVDMAPVLGFKKKKKKKRKFELPWGFLIVGWILATLSILVSSWMVIEVAGTFGK
QKATEWLTSMMISLIQDILLTQPLKVLVIAVFVSLIFKSPEKEDTDEPPVPHLQNDEEWL
HKPLTNEELNDPKKMVDLEIEGVIKDEEEDAIEKPDEDAIEVARVTRFKEMQMTKILKEI
VFYIVFLNVTMLITLGERDENAYYINKSLQDMFVSSSYHGKMQFSKILTKDQFWNYTENT
FLPTLYDHTLYNGETDILAEEGNIVADLQMYLLGQARLRQVRIEPESCKLHEQVKELMPE
CRDYFNVFDEQEGNFDEFWIPYNESNPINYEEGFNRAWQYRKASDLNSSALWGRYVVYPG
SGYAIELGSSLGEAKAVVSYLRDSLWIDQYTRAVFLEFVMYNANLNMHSASALIVEMQSI
GGASPFTFFWTTRLDRYDGSFAIFILAGQLIFGLFIIYFLQHEIRNIIKEKKEYFKNPWN
IAELVTIALSISGMGFYAYRYIVGRSLMEDYKEHQPMMIDFHFFAQWDQLYGFMVGFVLF
IATIKFMRILRFNRRILIFSMTLRNCSKDMSYYGIVFTIVFMAFACAGYAIYNKDMKDFS
TVVRTVETLFSTVLGKFNFSEMKETNRILGPMFFFAYVVLIVFVLLNMFLSIINQSFSKV
RHETNAIDGEMEIVDFMMERFKRWTGFSEPRVKTKEKKFLYIEYVDPVDKACDDLRLKLN
GMVDELNAHIRKARQEDSDYIYEDNYDYGSSGKKIFLSS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaaagcccatcgtggtttctcaatcgtttgatgattaaggatttgacccat
gatagagtgtattactttatgctggataaatggttggcggtagaagaagatgatggatcg
attgagagagtcatcccagtcgctggtaaaagtgaactgacggcattcggacacctgttc
tatagtaaaacgcgtcgtaatttgagcgatgcgcacctgtggttttctgtgtttgcacgt
ccagcaaagagccgcttcactcgcgtccaaagagctacctgttgcctttccttattattt
acagcaatgatgtcaaatatatttttctacaatgtggatttcgtcgacccctcagcacag
cagaaagtttttaaaattggtcctataggcttcacgatgagcgaggtggttataggagtt
attgccagtctaatggtagtccccatcaaccttattatagtccagatattccgtatcaca
agaccagcaccaccaagtgcttgcggctgttgttctaaaaagaaaaggcaccaagatgga
gatgcttacgaagctcggaaaatgactcaaacaccaaaagttgatgaagaagacgaactt
cagcgtcagttagatctactagaagaagaagaaatgaaacaaggccctataccgtcagta
tctttagaagtcgacaatagcagccgcaccaactctacccaatccttgccacgtgaaaat
cgaaacaatagtacagcaaccgttgacatggcaccagttcttggattcaagaagaagaaa
aagaagaaaaggaaatttgaattaccatggggattcctcatagtaggatggatcttggca
acgttgtctattttggtgtcctcgtggatggtaattgaggtagcaggtacatttgggaaa
cagaaggctactgaatggttgacgtccatgatgatatcccttatccaggatattctctta
acgcaaccactaaaagtgctggtgatcgcggttttcgtgtctctaatttttaaaagccct
gagaaagaggacacagatgagcctccggtacctcatctgcagaacgatgaagaatggctg
cacaaaccactcacaaatgaggaactcaacgatcccaagaaaatggtagacttggagata
gaaggggtgataaaggatgaagaagaagatgcaattgaaaagcctgatgaagatgctata
gaagtagcaagagtaacaagatttaaagaaatgcaaatgacgaaaattttgaaagaaatc
gtattctacattgttttcctgaacgtgaccatgttaatcaccttgggtgaaagagacgaa
aatgcttactatatcaacaaatcactgcaagatatgttcgtatcatcgtcttatcacggg
aaaatgcaattttcaaagattcttactaaagatcaattttggaactacacggaaaacaca
tttttgccgaccttatatgaccatactttatataacggcgaaactgacatcttagctgaa
gaaggaaatatagtagcagatttacaaatgtatttgcttggccaggcccggttacgacaa
gtccgcattgaaccagaaagttgcaaacttcatgagcaagtgaaagagcttatgcctgaa
tgcagagactattttaacgtattcgatgagcaagaggggaactttgatgagttctggata
ccctataacgaatcaaatcccataaattacgaagagggcttcaaccgtgcatggcaatac
agaaaagcttcagatctaaattcctctgctctatggggtcgctacgtggtctacccggga
agtggatatgccatcgaacttggttcatcactcggtgaggctaaagccgtagtttcatac
cttcgtgattcattatggattgatcaatacactagagctgtattcttggagtttgtcatg
tacaatgccaatctgaatatgcattctgcctcagcactaatcgtggaaatgcaatccata
ggaggcgcatcaccattcacattcttctggactacgagattagatcgctatgacggcagt
tttgctatcttcattctggctggtcaacttatattcggtctcttcatcatctactttcta
caacacgagattcgtaacataatcaaagagaagaaagaatatttcaaaaacccatggaat
attgccgaattggtgaccattgcactctcgatatctggtatgggcttttatgcctataga
tatattgttggtcgtagcctgatggaggactataaagaacaccaacctatgatgattgat
tttcactttttcgctcagtgggatcagctctacggattcatggtaggcttcgttctattc
attgccacaataaaattcatgcgcatacttcgcttcaatcgccgtatcctcattttctca
atgacacttcgtaactgttctaaagatatgagttattacgggatagtatttaccatcgtc
ttcatggcatttgcgtgtgcgggatatgcaatctacaacaaagatatgaaggatttcagt
acggtggtccgtacggttgagactttgttttcaactgttcttggaaagttcaacttctcc
gaaatgaaggaaactaatcggatacttgggcctatgtttttcttcgcctacgtcgtgctt
attgtgttcgtacttctcaacatgttcttatcaatcatcaaccaatcatttagcaaagtt
cgtcacgaaactaatgctatcgatggtgaaatggagatcgtcgacttcatgatggaacga
ttcaaacgatggacaggcttttctgagcctcgtgtcaaaactaaagaaaagaagttcctc
tacattgaatatgttgacccggttgacaaagcttgtgatgatctacggcttaaactgaat
gggatggtagatgagctgaacgctcacatcaggaaagcacggcaagaagactcggactat
atctacgaagacaactacgactatggcagctctggaaagaaaatatttcttagcagttaa
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