KEGG   Amphiura filiformis: 140156662
Entry
140156662         CDS       T10871                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
afil  Amphiura filiformis
Pathway
afil03082  ATP-dependent chromatin remodeling
afil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140156662
   03083 Polycomb repressive complex
    140156662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afil03036]
    140156662
Chromosome and associated proteins [BR:afil03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     140156662
  Histone modification proteins
   HAT complexes
    HATB complex
     140156662
   HDAC complexes
    Sin3A-HDAC complex
     140156662
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     140156662
    PRC2.2
     140156662
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     140156662
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140156662
  Chromatin remodeling factors
   NuRD complex
    140156662
   NuRF complex
    140156662
   NuRF complex (fruit fly)
    140156662
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR19_1st MIOS_WD40 eIF2A Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 140156662
NCBI-ProteinID: XP_072035699
LinkDB
Position
7:5089170..5112803
AA seq 440 aa
MAEKEGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTSQWLPDVTKKEGN
DYSIHRLVLGTHTSGQVAAAGATPGWSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFG
GFGSVSGKIEIEIKINHEGEVNRARYMPQNPTIIATKTPSSDVLVFDYKKHPSKPADPNG
DCNPDMRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICMWDINMNQKENRVIDAKTIFTG
HSAVVEDVSWHLLHESLFGSVADDQKLMIWDTRVNNTSKPSHAVDAHTAEVNCLSFNPYS
EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW
DLSKIGEEQTPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA
ENIYNDEEPETPQQELEPAS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcagaaaaagaaggagaaacctttgatgatgcagtagaggaaagagtgatcaatgaa
gaatacaaaatatggaagaaaaacacaccatttctgtatgacttggttatgacacatgcc
ctagagtggccaagtttaacatcacaatggctgcctgatgtcacaaaaaaagaaggcaat
gactactccatacacagacttgttttaggcacacacacctctggtcaagtggcagcagcg
ggcgctacacccgggtggtcggacgaacagaaccatttggtaatagccagtgtacagctg
ccaaatgatgacgcacagtttgacgcatcacactatgacagtgaaaaaggagaatttggt
ggttttggttctgtgagtggtaaaattgaaatagaaatcaaaattaaccatgaaggagaa
gtcaacagagcccgatatatgccacagaatcccacgattattgccacaaagacaccctca
agtgatgtcctcgtctttgactacaaaaagcatccgtcaaaaccagcagatcctaatggt
gattgtaatccagacatgaggttgagaggtcatcagaaggaaggttatggcttatcatgg
aatccaaatcttagtggacacctgcttagtgcatcagatgaccatacaatctgtatgtgg
gacatcaacatgaatcaaaaagagaaccgtgtaatagatgccaaaaccatcttcaccggc
cattcagcggtagtagaggatgtttcatggcatcttcttcatgagagcctgtttggctcg
gtagcagatgaccaaaaactcatgatctgggacacaagggtaaacaacacaagcaaaccg
agtcatgcggtagatgcacacacagcagaggtgaactgtttgtcattcaacccttacagc
gagttcatcttggctacaggatctgcagataagactgttgcattgtgggatctgagaaat
ctgaagttgaaactgcattcctttgagtctcacaaagatgagattttccaggtgcagtgg
tcacctcataacgagaccatcctggcatccagtggaacggacagaaggctcaatgtctgg
gatcttagtaaaattggagaagaacaaactccagaggatgccgaggatggacctccagag
ttactcttcattcatggaggacataccgcaaagatatcagacttctcatggaatcctaat
gaaccatgggtcatatgctcagtgtcagaagacaacattatgcaagtctggcagatggca
gagaatatctacaatgatgaggagccagaaacgcctcagcaagaattggagccagcctca
taa

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