Amphiura filiformis: 140156718
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Entry
140156718 CDS
T10871
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
afil Amphiura filiformis
Pathway
afil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
140156718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140156718
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
140156718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
140156718
NCBI-ProteinID:
XP_072035757
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Position
7:complement(9574259..9593088)
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AA seq
937 aa
AA seq
DB search
MIKTIKMALQPTQQLSMDSTQEFGFLKFLRLMPEKPETTFRVFDRTDYYTVHGADALYAA
KEVFKTNGVIKYLGSGEKKVPSVVLSKMNFEAVVRDLLLVRQYRVEVFQNKTVKGNEWEL
AFKASPGNLAQFEDILFGNNEMSTSASVIAVKFSNEGGQRIIGVGYADATLRELGVCEFP
DNDQFSNLEALIVQLGPKECLLPASGGDNIPEVAKLKQIIQRGGLLVTERKKVEFTTKDM
VQDLNRLLKSKHEEQFNSAALAEMEKANAMASVAALIKYLELLGDETNFGQFKLLTFDLK
QYMKLDAAAVRALNLLPTPQDVGSRNMSVLGLLNKCKTPQGQRLLGQWVKQPLMDKNKIE
ERLNIVETFLEDTELRQMLQEEHLKRVPDFQRLAKKFQRKRATLQDCYRVYQAVEFMPTV
LETLERHEGQYGSLLREVFSNPVKELLLDFVKFQEMIETTMDLTQVENHEFLIKPDFDEN
LQNLRETLDSLEVEIQSQLKKAARDLGLEAGKTIKLESNNQIGYFFRVTRKEEKALRNNK
KYKTISTNKNGVQFHNSSLQSLNDDHMRAKENYNETQKAVVTEIVGISSGYVDPMIVLND
IMAQLDVLVSFAHVSANAPITYVRPKLSAKGTGGICLRQARHPCLEMQDDVAFIPNDVTF
DREKQMFHIITGPNMGGKSTYIRQIGVVILMAQLGCFVPCESADIAICDSILARVGAGDS
QLKGVSTFMSEMLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIATKMKGF
CLFATHFHELTALADVVPTVNNLHVTALTSDEQLTLLYRVKPGVCDQSFGIHVAELAHFP
QKVIDFAKEKAAELEDYQSLSMADAQSMEGFDEPAAKKRRTDKQEGEAIIQDFMSKVKQI
PLATMSSDEAWQQIQKLKDEVAAKNNNYIQEILSRGT
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacaatcaaaatggccttacaaccaactcagcagctgtccatggacagcacc
caggagttcgggttcctcaagtttcttcgcttgatgcctgagaaaccagaaacaacattc
cgagtgtttgacagaactgactattatacagtacatggagcagatgctttatacgcagct
aaagaagtgttcaagaccaatggagtcatcaaatatttgggttcaggggagaaaaaggtg
ccatcggttgtgctgagtaagatgaattttgaggcagtagtacgggacctccttctggtg
agacagtatagagtggaagtatttcagaacaaaactgtcaaaggaaatgagtgggaatta
gcttttaaggcttcaccaggcaacttggcacagtttgaggacattttgtttggtaacaat
gagatgtcaacatcagctagcgttattgcagtcaagttttctaatgaaggtggacagcgc
attattggagttggttatgcggatgctacactaagagaacttggtgtgtgtgaattccct
gataatgaccaattctctaatctagaggcactcatagtccaacttggcccaaaggaatgc
cttcttcctgcatcaggtggtgacaacattccagaagtagccaaactgaagcagattata
caaaggggagggttactggttacagaacgcaagaaggtagagtttactacaaaagacatg
gtgcaagatctgaatagactactgaaatcaaagcatgaggaacagtttaacagcgctgct
ttagctgaaatggaaaaggccaatgcaatggcatcagttgctgccctcatcaagtactta
gagctactgggagatgaaaccaattttgggcagtttaaattattgacctttgacctcaag
caatacatgaagctagatgctgctgctgtaagggcgttgaacttgctaccgacacctcaa
gatgttggatctcgtaatatgtctgtattgggtctgctgaacaagtgcaaaacacctcag
ggtcaaaggttactgggtcaatgggtcaaacaaccactaatggacaaaaacaaaattgaa
gaaagactaaatattgttgagacatttctggaagacacagaactacgtcagatgctgcaa
gaagaacatctcaagcgtgtaccagactttcaaagattagccaagaaattccagcgtaaa
cgagccaccctacaagactgctaccgtgtctaccaggcggtagagtttatgcctacggta
ttggaaacactggagaggcatgagggacagtatggaagtctacttagagaggtcttctca
aacccagttaaggagctgttactagactttgtcaagttccaagagatgatagagaccaca
atggacttgacacaggttgagaatcatgaattcctcatcaagcctgactttgatgagaac
ctacagaacctgcgtgagacattggatagtttggaagtagagatccaatcccagctgaag
aaggctgctcgtgatttagggctggaagcaggcaaaaccatcaagttagaatctaacaac
caaataggatacttcttcagggtcaccagaaaggaagaaaaggcactaagaaacaacaag
aagtataagaccattagcaccaacaagaatggagtccaatttcacaactcaagtctgcag
tctttaaatgatgatcacatgagagctaaagagaattacaatgaaacacaaaaggctgtt
gtgacagaaatcgtgggcatttccagtggctatgtagaccctatgatagtactgaatgac
atcatggctcaacttgatgttttggttagttttgctcatgtgtcagccaatgcaccaatc
acatatgtgcgcccgaagctttctgcgaagggaactggtggtatttgtctaaggcaagct
cgacatccgtgtctggagatgcaagatgatgtagctttcatccctaatgatgtgaccttt
gaccgggagaagcagatgttccacataataactggtccaaatatgggtggaaaatctaca
tacatcagacagattggtgtagttatattgatggctcagcttgggtgctttgtaccttgt
gagtcagctgatattgccatatgtgacagcatcctagccagagttggtgctggtgatagt
caactcaaaggcgtgtcaacgttcatgtcagaaatgctggaaacggcttcgatattgcgg
tctgccagtgaaaactctctgataattattgatgagcttggacgtggaacatctacttat
gatggatttggcttggcttgggcaatctcagaacatatagctaccaagatgaagggtttc
tgtctattcgctacacatttccatgagttgacagccttagctgatgttgtccctactgta
aacaacctccatgtgacagctttaactagtgatgaacaactgacattgctctacagggta
aaaccaggtgtgtgtgatcagagctttggtattcatgtcgctgagctagctcacttccct
cagaaagtgatagactttgccaaagagaaggctgctgaattagaagattaccagagtcta
tcaatggcagatgctcaatctatggaaggctttgatgaacctgcagcaaagaaaagaaga
actgacaaacaggaaggtgaagccatcatccaagacttcatgtccaaagtgaagcagatt
cccttagcaacgatgtcatcagatgaagcatggcaacagatacagaagctgaaagatgag
gtggctgcaaagaacaacaactacatccaagaaatactctcaagaggaacatag
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