Amphiura filiformis: 140156807
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Entry
140156807 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
afil03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140156807
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140156807
NCBI-ProteinID:
XP_072035891
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Position
7:16619246..16650971
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AA seq
705 aa
AA seq
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MASPVLVLEGLRASDKGKLRYDGDWYEEGRIHEVVEECTSPPSFPAHICRVNISLSASEH
SDYGSPIISSPISSKASIERGTLHQQTQSQFCDIIESTEEKDEDAETQALYHRTGEVEVS
IKQCEKEWVDMAKERVKQRQKDYDSHSKMLTEQAIQNTNLLTQQHELKNQVMMQKIREVQ
QESDQTRQRRLRNQQERQRLHVKRMDAKLRAAQQQKEKAEEAERLRRAAEMEAYLNAMMN
VKQQIDEVAKRIVGMLDGCRHKKHLPQIAEDIRKKVNALCGQAERYVQNARQQGASMQLV
DGLKIMIDHMMQCQELAKKTVAEADRLGQEEAVKKAKEEEAKQKAAQTAVTAAATAAASS
TAAAAAAATAGAPRISQGGASLNKFVNEDALKEYETVQQKLEETVQAYQNLKSSTDAQVK
KFRNDIMKAVNTPINAISVQSGRQLLDQLRRLSKLLAGERVEISGGRQVSKADLPSGKAY
XQETLARKLVAQCDKQISSNHETAFPFAAITVALWKDYPDVKQLMLAHFYKGCPFLLPYY
IPKQEKQSTEDYYKALGYVYDADGQVEAQDKYLKRLSGFMRLYAAIIATKPLQGGNQVHP
FGACEGWTWLSRVMNLEPQPDVTATMLHDFLEVCGHTLANTYGRQFFKLLQTLCKQYFPK
IEAVTPKGAASGGPVLRLKSFLETCIKTQKFPPPKGLLTDEFWRS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccggtgctagtgttggaaggacttcgagcatcggataaaggaaaattgaga
tatgatggggactggtacgaagaagggcgcattcacgaagtagtagaagaatgtacatca
ccaccttcatttccagcacacatatgtcgggtcaacatatctttatcggcatctgaacat
agcgactatggttcaccaattatcagttcacctatttccagtaaggcctccattgagagg
ggaacactccatcaacagactcagtcacaattttgtgacataatagagagtactgaagaa
aaagatgaagatgcagaaacccaagcattataccatcgaactggagaagttgaagtgtca
attaagcagtgtgagaaggaatgggttgacatggcaaaggagcgtgttaagcagcgacaa
aaagattatgattctcattccaagatgctaacagaacaagctatacagaacacaaatctg
ctgactcaacagcatgaactcaagaaccaagtaatgatgcaaaaaattcgtgaagtgcaa
caagagagtgaccaaacaagacaacgaaggcttagaaaccaacaggaaagacaaagattg
catgtcaagagaatggatgccaaactgcgtgctgcccagcaacagaaggagaaggcagaa
gaagcagaaagattacgaagagctgctgaaatggaagcctacctgaatgccatgatgaat
gtgaagcagcagattgatgaggttgctaaacgcattgttggaatgttggatggatgccga
cataaaaagcatctacctcaaatagctgaggatatccgcaaaaaagtcaatgctttgtgt
ggacaagctgaacgatatgtacagaatgctcgccaacaaggagcatccatgcagcttgtt
gatgggttaaagattatgatagaccatatgatgcagtgtcaagaattggctaagaaaaca
gttgctgaagcagataggttaggccaagaggaggcagtaaagaaagccaaggaagaagag
gctaagcagaaagcagctcagaccgctgtaacagctgctgccactgcagcagcaagtagt
acagcagcagcagcagcagcagcaacagccggggcaccaaggataagtcaaggtggtgca
tcattaaacaaatttgtaaacgaagatgctttaaaagagtatgaaacagtacagcagaaa
ttagaagaaacggtacaagcataccagaacttgaaatccagtacagatgctcaggtgaag
aagttccgtaatgacatcatgaaggcagtgaacacaccaatcaatgccatctcagtgcaa
tcaggcaggcagctcttagaccagctacggcgccttagtaaattacttgctggagaaaga
gtcgagatatctggtggaaggcaggtgtcaaaagctgatttgccatcggggaaggcgtat
tgacaagaaacactggccagaaaacttgtggctcagtgtgacaagcagatttcttccaac
catgagacagcgtttccatttgcagctataacagtagctctatggaaagattacccagat
gtaaagcagcttatgttagctcatttctacaaaggatgcccattcctactgccatattac
attcctaaacaagagaaacagtctactgaggattactataaagcacttggttatgtatat
gatgcagatggacaagtagaagcacaagacaaataccttaaacgcctcagcggtttcatg
aggctctatgctgcaatcattgcaactaaaccactacaaggaggcaaccaggttcatcca
tttggagcatgtgagggttggacctggttatcaagagtcatgaatttagagccacaacct
gatgttacagctacaatgctgcatgactttctggaggtatgcggtcatacattagccaac
acgtatgggagacagttcttcaaattacttcagacactttgtaaacagtactttcctaaa
attgaagctgttactcctaaaggtgccgcctcaggtggacctgtattaaggttgaagagc
ttcttagaaacgtgtatcaagactcaaaaattcccaccaccaaaaggcttacttacagat
gaattctggagaagttga
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