Amphiura filiformis: 140156918
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Entry
140156918 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
afil Amphiura filiformis
Brite
Membrane trafficking [BR:
afil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140156918
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
140156918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140156918
NCBI-ProteinID:
XP_072036061
LinkDB
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Position
7:23854075..23958453
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AA seq
1110 aa
AA seq
DB search
MAVIQLMFLINEGALVSVCADDSLHLWNLRQKRPAILHSLKFNRERITYCDLPFQSKWLY
IGTERGNVHVVNIESFVLSGYVINWNKAIELSRKTHPGPVVHLSDNPMDSTKLLIGFESG
AVVLWDLKNRVAENRFNCSQPVRCVSWHYEGRQFIVSHTDGTLTIWNVRNPVKPANVIAP
HAKVPAKGLKPEPCTPVTKVEWRAVKSGDPYILFSGGLPYEKQGATPSLTIMQGKTTTVL
EMEHPVMDFLCLCENPWPSNPQEPYAVVVLLESDLVVVDLTSQGYPCFENPYPMDLHESP
ITCVQYYADCPTDLIPHLYSAGSNNLNRKKAAFSKKNWPVKGGGWGTGGSSDQEIVITGH
ADGTIKFWDASQVMLQVLYKLKTSKVFERSKQAKSLDGARSHYAIQMMRMCTDSRILAVA
GASGHVLLYRFSRVDTNTELPVLEIAIVYEPDEPDTPEMEAPPPPPPTPLKRNTSTVSSR
SVDSASLPSTPRDREATTNPVGSTSSGEGVKDNVPNLRVKGGAHKRSAGFQPDLCCQLLW
VDGEAPAMITCLEINSCYGLMVFGTVTGIVIVDIMQKTCLLNMGTPDLYGSCDPYQRTPR
SPKKTKSQGLGDIVEQCMADPERCRPNTGSGMQEQNGVCTSPTGGGGGGGGASNTSARRX
RNNHDPAAQLKRSKSQGSRKVLKSQSTLTDTGNGEALDHGKDRSEGSFTRSRSSSMSSLD
KETREGVQSVTFAESYTRKTAVSTAVAAVALPVAMPVVRKECSIETAESVTSPCIWIGTT
LGSVLVIVLNMPPPSEQRMTQPVIVTPSGTVLRLKGSILSMGFLDCNGSLIQPTFDAWKD
MNRDTRDTKDKKSTALQRSRMSPSSSTEIADRQFVVICSEKEAKVISLPSQTCTYRVKVX
ETSYVVRADIIEICNSVCLVCYVANGHVMAFSLPSFRVLLDHDYLPLTDLRIGRTFQFSS
NGKGIYQCTPTEIQRITICQEASESLHDMLGDLFLPVDTPDAPSKGFFKGLFGGGGGALD
REELFGEASGKPSRSVAKHIPGTGGLEGVKAGAGGAMSEVAKARIALYERGEKLSELEER
TAHMMANAENFSQAANQLMAKYKDKKWYQF
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcagttatacaattaatgtttctaataaatgagggtgctttggttagtgtgtgtgct
gatgatagtctgcacttatggaatttgagacaaaaaagaccggcaatactacattctctc
aaattcaacagagaacgaataacctattgtgaccttccattccaaagcaagtggttgtac
ataggcacagagagaggcaatgtacatgtcgtcaacatagaatcttttgtcctttctggt
tatgtcatcaattggaacaaagcaattgaactgtcaagaaaaacacacccaggtcctgtg
gtacacctcagtgataaccctatggattctaccaagctattaattggttttgaaagcggt
gctgtagtgctatgggatctaaagaacagagtagctgaaaatcgttttaactgtagccaa
cctgtgcgctgcgtgtcgtggcattatgaagggagacaattcatagtaagccatacggat
ggcacgctaactatatggaatgtacgtaaccctgtgaaacctgccaatgtcatcgctcca
catgccaaagttcctgccaaaggcctgaagcccgaaccatgtactccagtcacaaaggta
gaatggagggctgtcaaatcaggggatccctacatattgttttctggtggtctaccatat
gaaaaacaaggtgcaacaccaagcctgaccatcatgcagggcaagaccaccactgtctta
gaaatggaacatcctgtcatggacttcctctgcctatgtgaaaacccatggccaagcaat
cctcaagagccgtatgctgtcgtggtactgctagagagtgatctagtggtcgtagatctc
acatcacaagggtatccatgttttgagaacccttatccgatggatctgcatgagtctcct
ataacctgtgtgcaatattacgctgactgtcctaccgatcttatccctcatctgtactct
gcgggatccaacaacctcaaccgtaaaaaagctgctttcagtaaaaagaattggccagta
aaaggtggcggctggggaacaggaggtagcagtgatcaagaaatagtcataactgggcat
gcggatggcacaataaagttttgggatgcttcccaagtaatgctgcaagtactgtacaaa
ttaaaaacatccaaagtgtttgagagaagcaagcaggcaaagagcctggatggagcgagg
agccattacgcaatacagatgatgagaatgtgtacagatagcaggatactggctgtagca
ggtgctagcggacatgtcctgctctatagattcagccgggtggacactaatacagagtta
ccggttttggaaatcgccatagtctatgagccagatgaaccagacacacccgaaatggaa
gcaccacctccacccccacccacaccattaaaacgcaataccagtactgtgagctcaaga
agtgtagacagcgctagtctaccctctacccccagagatagggaagcaaccactaatccc
gtggggagtaccagctctggtgagggggtcaaagacaacgtcccgaatttgagagtcaaa
gggggcgcgcataagaggtcagcgggatttcagcccgacttgtgttgccagcttctctgg
gtggacggggaggcaccggcaatgatcacttgtctagagatcaactcatgttatggtctc
atggtatttggcactgttactggcattgtgattgtggacatcatgcagaaaacatgtcta
ctcaacatgggaactccggacctgtacgggtcctgcgatccttatcagagaacgccgcgg
tctcccaagaaaaccaaatcgcaaggcttaggtgatattgtagagcaatgtatggctgat
ccagagaggtgtaggcctaatacagggagtggcatgcaggaacagaatggtgtatgtaca
agcccaactgggggtggtggtggcggcggcggggcgagcaacacctcggcccggagantg
cgcaacaaccacgaccccgccgcacagcttaagcgtagtaagtcgcaaggttcccgcaaa
gtgctgaagtcacagtcaactctgaccgatactggcaatggtgaagcactggaccatggc
aaagatcgtagcgaggggtctttcacaaggtctcgtagctccagcatgtcaagtctcgac
aaggaaacgagggagggcgtacagagcgttacttttgcagaatcgtacacaaggaaaaca
gccgttagtactgcagtcgctgcagttgcattgccagtagcaatgcctgtggtccgcaaa
gaatgctcaattgaaaccgcagaatctgtaacatcaccatgcatttggataggaaccacg
ttaggatctgtgttggtaatagttcttaacatgccaccaccgagtgagcagagaatgaca
caaccagttattgtcacacccagcggtactgtactgagattaaagggtagtatcctatcc
atggggttcctggattgcaatggttccctcatccagccaacatttgatgcctggaaagat
atgaacagagatacaagggatacaaaggataaaaaatcaacagctctgcaacgtagtcga
atgtctccttcctcttccacagagattgctgatcgacagtttgtcgtcatctgttcggaa
aaggaagccaaggtaatatcactaccatcacaaacatgtacttatcgagtgaaggttnng
gagacatcatatgtggttagagcagatatcattgaaatttgtaacagtgtatgtctggtg
tgttatgtagctaatggtcacgtcatggcctttagtctgcccagctttagagtactcctg
gaccatgattatctgcctctaacagatttaagaattggtcgaacattccagttcagttcc
aatggtaaaggtatatatcaatgcactcccacagaaatacaaaggataaccatatgccag
gaagcaagtgaaagtttacacgatatgctgggtgacttatttctaccagtggacacacct
gatgctcctagcaaaggcttcttcaaggggctctttgggggaggaggaggggcgctagac
agagaagaattatttggtgaagcaagcggcaagccttcacggagtgtagccaaacatatc
ccaggaactggtgggttagagggtgtcaaggctggagctggcggggccatgagcgaagta
gcaaaagctcgcattgccctgtatgaaagaggtgagaagctgagtgagctagaagagaga
acggctcatatgatggccaacgcagagaactttagccaagctgccaaccaactaatggcc
aaatataaagacaaaaagtggtatcaattctga
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