Amphiura filiformis: 140156950
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Entry
140156950 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140156950
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140156950
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140156950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-RING_5
ATG16
zf-ANAPC11
zf-C3HC4_3
zf-RING_4
zf-Nse
APG6_N
FANCL_C
XRCC4_CC
RINGv
zf-C3HC4_4
zf-RING_16
DUF1198
Hat1_N
Sina_RING
zf_RING_Vps8_fungal
Zn_ribbon_8
DUF763
Motif
Other DBs
NCBI-GeneID:
140156950
NCBI-ProteinID:
XP_072036097
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All DBs
Position
7:25520629..25547759
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AA seq
447 aa
AA seq
DB search
MVIRSNCTICTEGFEGEKPIAACNCGHTFHEECIHRWVRTSSTCPQCRSKSTMRTIIRLY
WEKPDDDEEDVDPTKLKNELDTLSAELARKDQEKAVFLREKSEFADTLQKKQNKIKTISN
KLASEQITTDTLKKQLSLLSLQMEEAKAAKKEAKRLREQLQLLERFQLVITRDSEAVEDM
LNESGDGPKAARELATYCVALKREFQNGKDSKRRLKEENERLKKETSYKGKKVMERTLEV
ERLEKRVRSLEDDLNQVEAEKAAMKDKMTTLQRALESPSSSGSKSAISRLIMESPAPSLL
QRPNLSGNESIDLDDVTMNPGSPATPTFLEPSPSIQAKTDCREFNVPYIKTTSAATKRKR
LKEQEEDDAVVMSAICNSSLFNSKRPLRESQSITKKGYNGMGGHEKFFKSSFANSKPVAR
KAVTALRKKTGLAFKTTPPLPTLEKFL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggtgattcgctcaaattgcaccatatgcactgagggctttgaaggagaaaagccaatc
gctgcctgtaattgtggacacacatttcatgaagaatgtattcacaggtgggtgcggact
tcatcaacatgcccccagtgccggagcaaatctacaatgagaaccattatcaggttgtat
tgggagaagccggatgatgatgaggaggatgtagaccctacaaaattaaagaatgagttg
gatacccttagtgcagagttggcccgcaaggaccaggagaaggcagtgtttcttcgagaa
aaatctgagtttgccgacacgctgcagaaaaagcagaacaaaatcaaaactatctctaac
aagctggccagcgagcaaataacaactgatacactaaagaaacaattgtcactactgagt
cttcagatggaggaagctaaagctgccaagaaagaagccaagagattgagagaacaactt
caactgcttgaaagatttcagcttgtaataacccgggactctgaagcagttgaagacatg
ttgaatgaatctggcgatgggccaaaagcagctagggaactggcaacttactgtgtagca
ctcaagagagagtttcaaaatggaaaagactctaaaaggaggttaaaagaagaaaatgaa
aggctcaagaaagaaacttcatataaaggcaaaaaggtgatggaaaggactcttgaggtt
gaaagacttgagaaacgtgtgagaagtttagaggatgacctcaatcaggtcgaggcagag
aaagccgccatgaaagacaagatgaccactctacagagggcgcttgagtcgccgagcagc
tcggggagcaaaagtgcaatatctagactaattatggaaagtcctgcacctagccttcta
caaagaccaaatctgagtgggaacgagtccattgatctggatgatgtaacgatgaaccca
ggaagcccagctactccaacatttctggaaccaagtcccagtatacaagccaaaactgac
tgcagggaatttaatgtgccatatatcaagactacctctgctgcaactaaaagaaagagg
ttaaaagagcaagaagaggacgatgcagtagtgatgtcagccatctgtaattcaagtcta
ttcaattccaagagacctcttagagaaagccagtcaattacaaagaaaggttacaacggc
atgggaggccatgagaagttcttcaagagtagtttcgccaactccaaaccggtggccagg
aaagctgttacagcactacgtaagaagactggactcgcgtttaagaccacaccgccacta
ccaacactggaaaaattcttatga
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