Amphiura filiformis: 140157365
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Entry
140157365 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afil03009
]
140157365
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140157365
Ribosome biogenesis [BR:
afil03009
]
Eukaryotic type
90S particles
Helicases
140157365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Androgen_recep
Motif
Other DBs
NCBI-GeneID:
140157365
NCBI-ProteinID:
XP_072036635
LinkDB
All DBs
Position
7:complement(55809533..55890037)
Genome browser
AA seq
958 aa
AA seq
DB search
MAKEKHDNRKRKSGTFGGKKKGFQRGPRLKKWQLEAEEAKKLQLRYESINPSEISSFEDL
PLCSKTRMALSMANFKAPTEIQRMSIGTALQGHDVLAAAKTGSGKTLAFLVPILECLFRS
RWSAEDGLGALIISPTRELAYQTFEVLCKVGKKHDFSAGLIIGGKDLQTEIERISRTNIV
VCTPGRLLQHMDQTAGFECANLQMLVLDEADRILDLGFEKTMNAIVENLPPGRQTLLFSA
TQTKSVRDLXRLSLKDPKYVAVHQHHEYSTPAQLEQSYVVCDLDQKADLLYSFIRNHRDQ
KILVFMASCKQVKYMFETFCKLGAGTTIMALYGALHQMRRVAIYNEFCKRDSAVLFATDI
AARGLDFPGIKWVVQLDCPEDTNTYIHRAGRTARYEKGGEALLVLLPSEEEEMVKSLEDK
KIPIQQIRVNPNKKMTIQRKLESYCAENLELKQTAQRCFIAYIKSVYLMKNKKVFDVQQL
DLDKFALSLGLAVPPRVRFLQREEKRKQLKKQQQQEKSKSKNESRTSNNNKEVDDTSSKI
KVQEVNPTKAGSSSSEEEESGSSSSGSGDEESGDEEDGDSEDDVSGFKESMLKALKEDSS
EKPQARTSTGKDSKQVSKARTNVKEIGEDESENDLGESSDSDDDDDDDDSDEEEENEHSD
GGVEKTGGLLAGFHGNSDGEGDDDGDLFTVKTDVFGLKDKSKAIIDSDEEFLQVDRRVRQ
KKEQEESKKSANKVRQAKKLHKKKLAVNTKMVFDEEGEAVQQWPPRQKTVTKTEEDEYEG
GIDIERAKEFMTEEDRHDKAAFRQRVREKHKAQRLKEKEERRKGRSRKEEGEADPGMTLN
FLGDEGAFDPDTLPDPTSWEEDEEDKDVAGAKMSDTDDREEESGSGSEEEEEQVEKKSRS
GKKLKRSKDATETSVPKKQKMKRKMEEEDEGESDEEYSKGGMTLAEEEELALHILGNR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaaaaacacgacaacagaaagagaaaatcgggtacatttggcggaaagaag
aaaggatttcaacgaggacctaggttaaagaaatggcagttagaagcggaggaagctaag
aaactccaattacgttatgaaagtataaatccatcggagatctccagttttgaagattta
ccattatgcagcaagacccgtatggcattgagcatggccaacttcaaagctcccactgaa
attcagcgaatgagcattggcacggctctccaggggcatgatgtgctggctgcggcaaag
acagggtcaggaaagacactggcgtttcttgtacctatcctggaatgtctgtttagaagt
cggtggagtgcagaagatggacttggcgccctaattatatcgccaactagagagctagcg
taccagacctttgaagtgttatgtaaggttggcaagaagcatgacttctctgctggactc
atcattggaggaaaggatttgcagacagaaattgagaggatatcccgtacaaatatagtg
gtgtgtacccctggcaggttgctacagcatatggaccagactgcaggctttgaatgtgcc
aacttgcaaatgctagttctagatgaggcggatcgtattcttgatcttggctttgagaag
accatgaatgccattgttgagaacttaccaccaggaagacagactctgctcttttcagct
acacaaaccaagtcagtacgtgatttgnngcgtttgagtctcaaggacccaaagtatgtt
gcagtccatcagcatcatgaatacagcacaccagcacagctagagcagagctatgttgta
tgcgatctggatcagaaggcagatctgctgtactccttcatcagaaatcatcgtgatcag
aagatattggtcttcatggctagctgtaagcaggtgaagtacatgtttgagacattctgc
aagctaggagccggtacgaccatcatggccctgtatggcgcactacatcagatgaggagg
gtggctatctacaatgagttttgtaagagagattctgctgtactgtttgcaactgatatt
gctgctagaggccttgatttcccaggcatcaaatgggttgtgcagctagactgtcccgaa
gacactaacacatacatccacagagcagggagaacagccagatacgagaaagggggagag
gctttactagtgctgctaccgtcagaggaagaagagatggtgaaatcgttagaagataag
aagattcctatccagcaaatcagggtgaatcctaataagaagatgacaattcagaggaaa
cttgaatcgtattgtgcagagaatttggagctgaagcagactgcccagagatgctttatt
gcctatatcaagtctgtgtatctcatgaagaataagaaggtgtttgatgtgcagcaattg
gacttggataagtttgcactgtcattaggtttggcagtacccccaagagtaagattccta
cagagagaggagaagagaaaacaactgaaaaaacagcaacaacaagaaaaatcaaaatca
aaaaatgaatcaagaactagcaataataacaaagaagtagatgatactagctccaaaatc
aaagttcaagaagtcaatcctaccaaagcaggttcttcctccagcgaagaagaagaaagc
ggaagtagttcatcaggtagtggtgatgaagaaagtggtgatgaagaagatggtgattcg
gaagacgacgtgtcgggatttaaagaaagcatgttgaaagctttgaaggaggactcgtca
gagaaaccacaagctagaactagtaccggtaaagatagcaagcaggtatcaaaagctaga
actaatgtgaaagagattggtgaggacgagagtgagaatgatttgggagagtcatctgat
agtgatgatgatgatgatgatgatgatagtgatgaggaggaggagaacgagcattcagat
ggtggcgttgagaagacaggtggactgctagcaggtttccatggtaacagcgatggagaa
ggggatgatgatggtgacttgttcaccgttaagacagatgtgtttggcttgaaggataag
agcaaggcaatcatagattctgatgaagagttcctccaagtggacagaagagtcaggcag
aagaaagaacaggaagaaagcaagaaatcagccaacaaggtcagacaggccaagaaacta
cacaagaagaaactggctgtgaacaccaagatggtgtttgatgaagaaggagaggctgtg
cagcagtggccacctcgtcagaaaacggtgacgaaaacagaagaggatgaatatgaaggg
ggtattgatatcgagagagctaaggaatttatgactgaagaagatagacatgacaaggct
gcattcagacagcgggtcagggagaaacacaaggctcagagactgaaggagaaggaggaa
aggagaaaaggaaggagcaggaaagaggagggggaggctgaccctggcatgactttgaat
ttccttggtgatgaaggtgcttttgacccagatacattgccagatccaacgagttgggag
gaggatgaggaggataaggatgttgctggggccaagatgagcgatacagatgatagggag
gaggagagtggaagtggaagtgaggaggaggaggagcaagtggaaaagaaatcaagatct
gggaagaaattaaagagaagtaaagacgcaaccgaaacatccgtaccaaagaaacaaaag
atgaagaggaagatggaggaagaagatgagggagaatcagatgaggaatacagcaagggt
ggaatgacactggctgaggaagaagaattagcactgcatatcttgggaaatagatga
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