Amphiura filiformis: 140157552
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Entry
140157552 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afil04990
]
140157552
Domain-containing proteins not elsewhere classified [BR:
afil04990
]
Other domain-containing proteins
Tubby family proteins
140157552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
Beta-prop_THOC3
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
SOCS_box
Beta-prop_ELP1_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_RIG_1st
Beta-prop_EML
DUF3527
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
140157552
NCBI-ProteinID:
XP_072036884
LinkDB
All DBs
Position
7:69858947..69906680
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AA seq
1070 aa
AA seq
DB search
MYAVLEHNPAARSDCTILSLSWKGTVPESEKEKSYTRKRCYTEGWLATGNLKGIVGATFA
TSHSHKSNSPPTRTNFNLRGHNSEVILVRWNEPFQKMATCDAQGVIFVWIKYEGRWSIEL
VNDRSCQVSDFAWSHDGRMALICYKDGFVLVGSVTGQRYWSSMLNLEAQLLCGAWAPDDK
QVLLGTSDGQIIVMDIHGAVVTQCTLAEDRSIKSLLWSSEKFRMVNVSDSESEDKPDKKK
RKGSERKNRGGKKRPPIMAVHLGDGEIQLMKAYDDLTPISIKTGMTVGLKMEWSSCGGFL
AVGGTQPVESISAVKFYNTNGHLRFTLNIPSQRPLSALTWGHNDQRLFVACGSILHVAWV
EKGVAPLQVLCREVIVGLVSDEKNVNKLPLPGRLKTYVTERSSVTIKGCIPDPSKLREFV
SRPPPGNERLHCTMIRTGDESSASSPCYTLFLEYLGGLVPLLKGRRVSKLRPEFVIYDPK
VSGEQLKAADDDDRIAALPVTCSTSSSSGSEDSDDETTNKNQRRLDLSSSVIDSPRRKEK
EYDNLFLESLPEQNRLVEVTSNIWGTKFKIHGLAPFLPTNLGQVNYRTSLLHLQPRQMTI
ALVELRPGAKPRRDEDQDFDPNVFSEDEDEQGDISTTPVPKRANPIPIAPIPTTNRSFSS
QDLNFIDQEPQIITTIPATNPSVTRTKAELASQSGMSIPTRSDCDKDQYIKXGAIPKRRA
SNRCKAALEAGSAVVGXTGALDVVDNAQIMNGSTEIVDGTIIDGEPCELQADLPRWADSA
TKLLQSIPSAHTPEVAVNGHDSLSPVETPELGIELVDLKKEVIPSGRGTDTSSSSGGEAG
VSQKTSVIKNKCRKSGSYSPHHNSRANSTDRSSSRDESPCGNGEISPKTKPRRTKSKSRR
NSHSASPAPKSSNHYSESEAVSSEHEKSKKPKRRSSSCSSSPSRGCKEKPRIDTSDSEAE
GNASEDESPAGTAKTRKAKLMRQYADCNSKVFVMHNKAPLWNENTQVYQLDFGGRVTQES
AKNFQVELHQKQVMQFGRIDGHAYTLDFQYPFSALQAFSVALANVTQRLK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgtgcttgaacacaaccccgcggctcgcagtgactgcaccatactgtcactc
tcctggaagggtacggtgccggagagtgagaaggagaaaagttacacacgaaaacgctgc
tacacagaaggctggttggcaacagggaatctgaaaggaattgtaggtgctacatttgca
acaagtcacagtcacaaaagtaattcacctccaacaagaacaaatttcaatctgagagga
cataatagtgaggtaattttagtccgatggaatgagccgtttcaaaagatggccacgtgt
gatgctcaaggggtcatctttgtgtggataaaatatgagggccggtggtcaattgaactg
gtcaatgaccgttcatgccaggtgagtgactttgcctggagtcatgatggtcgtatggct
cttatctgttataaagacggctttgttcttgttggatcagtcactggtcaacgctactgg
tcttctatgttgaatttggaagctcagttactatgtggggcttgggcaccagatgataaa
caggttttattagggacgtcggatggtcaaatcatagttatggatatacatggagcagta
gttacacaatgtacccttgctgaggatcgctctatcaaatcattgctatggtcatcagaa
aaattccgcatggtaaatgtgagtgatagcgaatcagaagataaacctgacaagaagaag
agaaaaggtagtgaaagaaagaatcgtggtggcaagaagcgccctcccatcatggccgtc
catttaggagatggtgaaatacagctaatgaaagcttatgatgatctcacaccaatttcc
atcaagactggcatgacagtaggactcaagatggaatggagcagctgtggaggcttttta
gcagttggtggtactcaacctgtagaaagtataagtgcagtcaagttttataatacaaat
gggcatctaaggttcacattaaacattccgtcacagagaccattatcagctttaacatgg
gggcacaatgaccaaagactttttgtagcctgtggctccatcctgcatgtagcatgggtg
gagaagggagttgccccccttcaggtgctatgcagggaagttattgttgggctagtctcg
gacgagaagaatgtcaacaaattacccctcccgggccgtctcaagacttatgttacagaa
cggtcttcagtaacaataaagggttgtataccagatccatctaagttacgagagtttgtg
agcagacctccaccaggtaatgagaggcttcactgcaccatgattcgaactggagatgag
tccagcgccagcagtccatgttacacgctattcctagagtacttagggggtctagtacct
cttcttaaaggtcgcagagtcagcaaacttagaccagaatttgtcatttatgaccctaaa
gtgtctggagaacaactaaaagcagcagacgatgatgatagaatagcggcattacctgtg
acatgcagcacaagtagtagttctgggtcagaggacagcgatgacgagaccactaacaag
aaccaaagacgtcttgacttaagcagtagtgtcattgattcacctaggaggaaggagaaa
gaatatgacaatttattcctggaaagcctaccagagcaaaataggctcgtggaagtgaca
tccaacatttggggcaccaagttcaagatccacggcctagcaccattcttgccaaccaat
ctgggtcaagttaactatcgtaccagtcttctgcaccttcaaccacgccaaatgaccatt
gcactggtagaattaagaccaggggctaaaccaagaagggatgaagatcaagattttgac
cccaatgtgttcagtgaagatgaagatgaacagggagacatctcaacaacaccagttcca
aagagagccaatccgattccaatagcgcctataccaaccacaaataggagcttctccagc
caggatctcaattttatagaccaggagccacagataattaccaccatcccagccactaat
cctagtgttacaagaactaaagcagaactagcaagtcagtcgggcatgtccatccctact
agatctgactgtgataaagaccagtatattaaancaggagccatcccaaagcgaagagca
tcaaataggtgtaaggccgctttggaagctggcagtgcagttgttgggncgactggggcc
ctggatgttgttgacaatgcgcaaatcatgaatggatctactgaaatagtagatgggacc
atcatagatggcgagccttgcgaattacaagcggatttaccgaggtgggcggatagcgcc
accaagttgctgcaaagtataccatctgctcatacgccagaagtggcagtgaatggacat
gattcattatcaccagtagaaacaccagaattaggaatagaattagttgatttgaaaaaa
gaagtgattccaagtggaagggggaccgacacttcttctagttcagggggagaggcagga
gtgtcgcagaaaactagcgtaattaagaacaaatgtagaaaatcgggatcgtattctccg
catcataatagtcgggcaaattcaacagacaggtctagctcacgagatgaaagtccttgt
ggtaatggtgaaatttcacccaaaacaaaaccaaggcggaccaaatctaaaagtcgccgt
aactctcacagtgccagcccagcccccaaatcgtctaatcattactcggagtcggaggct
gtctcctcagaacacgagaaatccaagaaaccaaagcggcgtagctccagttgcagtagt
agcccatcacgggggtgtaaagagaaacccagaatagacacgtctgatagcgaagcggaa
ggaaacgcaagtgaggacgaatcacccgcaggcactgccaaaacacgcaaagccaaatta
atgcggcaatatgctgactgtaattccaaagtgtttgtgatgcacaataaagctccttta
tggaatgagaatacacaagtttatcagttggattttggaggaagagtaacccaagaatct
gccaagaatttccaagtggagttgcatcagaaacaggttatgcagtttggtcgcattgat
ggccacgcctatactctcgacttccagtacccgttttcggccttacaagcattctctgtg
gctcttgccaatgttacgcagcgtcttaaatga
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