Amphiura filiformis: 140157723
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Entry
140157723 CDS
T10871
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afil04990
]
140157723
Domain-containing proteins not elsewhere classified [BR:
afil04990
]
Other domain-containing proteins
Patched domain-containing proteins
140157723
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
UDPG_MGDP_dh_N
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
140157723
NCBI-ProteinID:
XP_072037068
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All DBs
Position
7:23371458..23375529
Genome browser
AA seq
785 aa
AA seq
DB search
MLGFEKIEELFKIIFKWYGGFVSHYHWIFIILTLAITIGMIPGLSMINYEGNVYELFTPH
DARSKEERAIYENLFLGAGDENTLPSRLIHDTRIGQVIFQAKDEFNVLTSAVMEDILSLH
WLIMNITVYDGEHNETEYQFEDLCLKWEGKCLENAVLDFYNYNAKEVDSIEITHPYATNP
EDDVFYLGGDLGGVTVDDDRRDDQGNAPIEHVEAMRITYFLRAIKEEENRRGARWERDFQ
KVVRAFESETMIIVSSTSELVNQEIDATITDAISLGIITFWVLIIFCTVACMMADWVLSK
PWLGIVGLLTACLSLIGAFGMMGYVGIPFAVLAGATPFLIIGIGLDDTYVALSAWRQTDI
YEDVELRLSEALAEAAMSITITSVTDALAFGIGAISNFPAIRYFSIYCGVAVTFCYLYQL
LFFAPCLALAGHTESTKRHSCCCCAPATEQDDSHGSFRNWLCCTGGTPKENDKTPWLMNF
FRKYYAPFLNHKAVTVVVILTFLGYLGVSIWGCTLIQRGLPEEKLVRDGSEAREFYKLKS
EYFGLFGPQIALIVTDYVAYSIPQVQEDLEYAVDFSAHICYAFVVYKGENETPRDSMEMT
RHGEPRRRRSSSEDEIYIDCSCCTLNLLTIPTNKERSINALYSLGLPIVQGALSTILSVL
ALAFSTAYVFQVFFKTMFLVIAFGALHGLVFLPVLLRLLVGEGEQLIAKYLRVVLGICAT
GTKGICATMAEHPYGSCCTCIIFFWWILPALASLFYSPPPEEEVIVILPTLNPILCPPPP
FPDPY
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttgggttttgagaagattgaagagctcttcaaaatcatcttcaaatggtatggaggc
ttcgtgtcccactaccattggatatttattatcctaactcttgccatcactatcggaatg
attcctggactttctatgatcaattacgaaggcaacgtctacgagttattcactccacat
gacgcgaggtctaaggaagaacgggctatttatgagaacttatttctcggtgctggagat
gaaaacacccttcctagccgattgattcacgacacacgaatcgggcaagtgatcttccaa
gctaaagatgagttcaatgtcctaacaagcgctgtcatggaggatattctaagccttcat
tggttgatcatgaacataactgtttatgatggtgaacacaatgagacagagtatcaattt
gaagacctttgtcttaaatgggaaggaaaatgtttggaaaatgctgtcttagatttctat
aactacaacgcgaaagaagtggatagtattgagatcacacatccttatgcgacgaatcca
gaagatgatgttttctatctgggtggagatttaggaggagttaccgtagatgatgaccgt
agagatgaccaaggcaatgctccaatagagcacgtagaagcaatgcgaattacctacttt
ctccgtgccatcaaagaagaggagaatcgacgcggtgcacggtgggaaagagatttccaa
aaagttgttcgtgctttcgaaagcgagacgatgattatagtaagcagtacgtcagagttg
gtgaaccaagagatagatgctactataacggatgctataagtctgggcatcataacgttt
tgggttcttattatattttgtactgtggcgtgtatgatggcggattgggtgttgagtaaa
ccatggctaggaattgtgggattgctgacggcttgcttgtcacttattggagcgtttggt
atgatgggatatgtcggaataccatttgcggtattggcgggcgcaacaccgtttcttatc
ataggaatcggacttgatgatacctatgttgccctttctgcgtggcggcaaaccgatata
tatgaggacgtggaactgcgtctcagtgaagcccttgccgaagcagcaatgtcaatcact
attacgtcagtaacagacgcactcgcatttggcatcggcgcaatctccaacttccccgcc
attcgatacttttccatttactgcggagtagctgtaacattttgctatttgtatcaactg
ttattttttgcaccttgcttggcactagctggtcacactgaaagcaccaagcgccactca
tgttgttgctgcgctccggccacggagcaagacgattcccatggtagttttcgcaattgg
ttgtgctgtaccggtggtacaccaaaggaaaatgataagacaccttggttgatgaacttc
tttagaaaatattacgctccatttctgaaccataaagcagtgactgtggtcgtcattctc
acattccttggctaccttggggtctccatatggggatgcactttgatacaacgtggtcta
ccagaagagaagctggtacgtgatggcagtgaagctcgcgagttttacaaattgaagtcg
gaatatttcggtctgttcggtccacaaattgcgctgatagtcacagattatgtagcctat
tcaatcccacaagtccaggaagatttggaatacgctgtggatttctctgctcatatctgc
tatgcgtttgtggtatacaaaggtgaaaatgaaacgcccagagattctatggaaatgact
cggcatggtgaacctaggagacggcgtagctctagtgaagacgagatctacattgactgt
tcatgctgtaccttaaatttgctcactataccaaccaataaagaacgctctataaatgcc
ctatacagtcttggtcttcccatagtccaaggtgctctatccaccatactcagtgtctta
gcactggccttcagcacggcttatgtcttccaagtttttttcaagacaatgtttctggtc
atcgctttcggcgctttacatggcttagtatttcttcccgttcttctaagacttttggtt
ggtgaaggtgaacaattgattgccaaatatcttcgggtagttttgggaatttgtgccaca
ggaaccaaaggaatttgtgcaaccatggcagaacatccatacggtagctgttgtacatgt
attatatttttctggtggattcttccagctttggcaagccttttttactctcctcctcca
gaagaagaggtgattgttatcttacccacccttaatccaatattgtgcccaccaccacca
ttccctgatccatattaa
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