Amphiura filiformis: 140157950
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Entry
140157950 CDS
T10871
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140157950
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
140157950
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
140157950
NCBI-ProteinID:
XP_072037302
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All DBs
Position
1:93000969..93021845
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AA seq
209 aa
AA seq
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MAASIAVCVPGERLGSTSDYHAGPGTYCKQGFVYSSLAGFKHVQETAKDELPKMQIVRDE
QETIVPQVGLVVTTKVVNVNPRFCRCAILSVEGKPLRQSFRGQIRREDIRATEKDRVEMY
KCVRPGDVVLAKVMSLGDAQSYLLTTAENELGVVLAQSEAGVNMVPISWCEMICPKTHQK
EFRKVAKVQSQYIQKEFNKVPSKHSQHRT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccatagctgtttgcgtgccaggggagcgactaggaagcacaagtgactat
catgcaggaccaggtacatattgcaaacagggatttgtctactcaagtttagctggtttc
aagcatgtgcaggagactgctaaagatgagctcccaaaaatgcagatagtgagagatgaa
caggagacaatagtaccacaggttgggttagtggtaaccaccaaagtagtgaatgtaaac
cccagattttgtcgttgtgccatactcagtgtggaaggcaaaccactgagacagagtttt
agaggccagattagacgagaagatatcagagccacagaaaaggatagagtagaaatgtat
aagtgtgtcagacctggagatgttgtcctcgctaaagttatgtctctaggtgatgctcaa
tcatacctattaactacagcagagaatgaactgggagttgtgcttgcacaaagtgaagca
ggtgtaaacatggtaccaattagctggtgtgaaatgatctgccctaaaactcaccagaaa
gaatttagaaaagttgccaaagttcagtcgcagtacattcagaaagagttcaataaagtg
ccatcaaaacattctcagcataggacttag
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